RNA–Protein interactions for RNA: ENST00000592533.5

ZNF540-210, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 2 BASIC

Gene ZNF540, Length 3,147 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-210ENST00000592533 MZB1Q8WU39 189 aa12.22□□□□□ -0.45
ZNF540-210ENST00000592533 SLC7A3Q8WY07 619 aa12.22□□□□□ -0.45
ZNF540-210ENST00000592533 RSRC1Q96IZ7 334 aaKnown RBP12.22□□□□□ -0.45
ZNF540-210ENST00000592533 TEX13BQ9BXU2 312 aa12.22□□□□□ -0.45
ZNF540-210ENST00000592533 ANKFY1Q9P2R3 1169 aa12.22□□□□□ -0.45
ZNF540-210ENST00000592533 RABGEF1Q9UJ41 708 aa12.22□□□□□ -0.45
ZNF540-210ENST00000592533 STRIP2Q9ULQ0 834 aa12.22□□□□□ -0.45
ZNF540-210ENST00000592533 RPL26L1Q9UNX3 145 aaKnown RBP12.22□□□□□ -0.45
ZNF540-210ENST00000592533 KIF1CO43896 1103 aaKnown RBP12.22□□□□□ -0.45
ZNF540-210ENST00000592533 SPAG7O75391 227 aa12.22□□□□□ -0.45
ZNF540-210ENST00000592533 DNAJC3Q13217 504 aa12.22□□□□□ -0.45
ZNF540-210ENST00000592533 CAPSQ13938 189 aa12.22□□□□□ -0.45
ZNF540-210ENST00000592533 HIF1AQ16665 826 aa12.22□□□□□ -0.45
ZNF540-210ENST00000592533 TXNRD3NBQ6F5E7 133 aa12.22□□□□□ -0.45
ZNF540-210ENST00000592533 ADGRD1Q6QNK2 874 aa12.22□□□□□ -0.45
ZNF540-210ENST00000592533 BBS12Q6ZW61 710 aa12.22□□□□□ -0.45
ZNF540-210ENST00000592533 PPIL6Q8IXY8 311 aa12.22□□□□□ -0.45
ZNF540-210ENST00000592533 ZBED8Q8IZ13 594 aa12.22□□□□□ -0.45
ZNF540-210ENST00000592533 NAT8LQ8N9F0 302 aa12.22□□□□□ -0.45
ZNF540-210ENST00000592533 NSMCE1Q8WV22 266 aa12.22□□□□□ -0.45
ZNF540-210ENST00000592533 L3MBTL1Q9Y468 752 aa12.22□□□□□ -0.45
ZNF540-210ENST00000592533 SSTR3P32745 418 aaPredicted RBP12.21□□□□□ -0.45
ZNF540-210ENST00000592533 ATP11AP98196 1134 aa12.21□□□□□ -0.45
ZNF540-210ENST00000592533 MYO1EQ12965 1108 aa12.21□□□□□ -0.45
ZNF540-210ENST00000592533 CDCA2Q69YH5 1023 aaPredicted RBP12.21□□□□□ -0.45
ZNF540-210ENST00000592533 FAM47EQ6ZV65 393 aa12.21□□□□□ -0.45
ZNF540-210ENST00000592533 DNERQ8NFT8 737 aa12.21□□□□□ -0.45
ZNF540-210ENST00000592533 LRRC37BQ96QE4 947 aa12.21□□□□□ -0.45
ZNF540-210ENST00000592533 LHX5Q9H2C1 402 aa12.21□□□□□ -0.45
ZNF540-210ENST00000592533 ACSS3Q9H6R3 686 aa12.21□□□□□ -0.45
ZNF540-210ENST00000592533 KIF9Q9HAQ2 790 aa12.21□□□□□ -0.45
ZNF540-210ENST00000592533 BATF3Q9NR55 127 aa12.21□□□□□ -0.45
ZNF540-210ENST00000592533 CISHQ9NSE2 258 aa12.21□□□□□ -0.45
ZNF540-210ENST00000592533 TRIM33Q9UPN9 1127 aa12.21□□□□□ -0.45
ZNF540-210ENST00000592533 POC1B-GALNT4F8VUJ3 575 aa12.21□□□□□ -0.46
ZNF540-210ENST00000592533 CST3P01034 146 aaPredicted RBP12.21□□□□□ -0.46
ZNF540-210ENST00000592533 KRT15P19012 456 aa12.21□□□□□ -0.46
ZNF540-210ENST00000592533 RPS12P25398 132 aaKnown RBP12.21□□□□□ -0.46
ZNF540-210ENST00000592533 ALDH3A1P30838 453 aa12.21□□□□□ -0.46
ZNF540-210ENST00000592533 PHBP35232 272 aa12.21□□□□□ -0.46
ZNF540-210ENST00000592533 EFNA5P52803 228 aa12.21□□□□□ -0.46
ZNF540-210ENST00000592533 PDE4CQ08493 712 aa12.21□□□□□ -0.46
ZNF540-210ENST00000592533 PDIA2Q13087 525 aaKnown RBP12.21□□□□□ -0.46
ZNF540-210ENST00000592533 SURF1Q15526 300 aa12.21□□□□□ -0.46
ZNF540-210ENST00000592533 SLC1A5Q15758 541 aa12.21□□□□□ -0.46
ZNF540-210ENST00000592533 SGSM1Q2NKQ1 1148 aa12.21□□□□□ -0.46
ZNF540-210ENST00000592533 DCUN1D2Q6PH85 259 aa12.21□□□□□ -0.46
ZNF540-210ENST00000592533 ZNF276Q8N554 614 aa12.21□□□□□ -0.46
ZNF540-210ENST00000592533 ATP11CQ8NB49 1132 aa12.21□□□□□ -0.46
ZNF540-210ENST00000592533 LRRC8CQ8TDW0 803 aa12.21□□□□□ -0.46
ZNF540-210ENST00000592533 SH3TC2Q8TF17 1288 aa12.21□□□□□ -0.46
ZNF540-210ENST00000592533 TMEM121Q9BTD3 319 aa12.21□□□□□ -0.46
ZNF540-210ENST00000592533 VPS37BQ9H9H4 285 aa12.21□□□□□ -0.46
ZNF540-210ENST00000592533 ETNK1Q9HBU6 452 aa12.21□□□□□ -0.46
ZNF540-210ENST00000592533 LRRD1A4D1F6 860 aa12.2□□□□□ -0.46
ZNF540-210ENST00000592533 SIGLEC16A6NMB1 481 aa12.2□□□□□ -0.46
ZNF540-210ENST00000592533 A8MUI8 341 aa12.2□□□□□ -0.46
ZNF540-210ENST00000592533 C19orf81C9J6K1 198 aa12.2□□□□□ -0.46
ZNF540-210ENST00000592533 ABLIM1O14639 778 aa12.2□□□□□ -0.46
ZNF540-210ENST00000592533 TM9SF1O15321 606 aa12.2□□□□□ -0.46
ZNF540-210ENST00000592533 MSCO60682 206 aa12.2□□□□□ -0.46
ZNF540-210ENST00000592533 KRT7P08729 469 aa12.2□□□□□ -0.46
ZNF540-210ENST00000592533 PTPRAP18433 802 aa12.2□□□□□ -0.46
ZNF540-210ENST00000592533 BRD2P25440 801 aaKnown RBP12.2□□□□□ -0.46
ZNF540-210ENST00000592533 ADCY1Q08828 1119 aa12.2□□□□□ -0.46
ZNF540-210ENST00000592533 SLC45A4Q5BKX6 768 aa12.2□□□□□ -0.46
ZNF540-210ENST00000592533 SCARA3Q6AZY7 606 aa12.2□□□□□ -0.46
ZNF540-210ENST00000592533 GPAT2Q6NUI2 795 aa12.2□□□□□ -0.46
ZNF540-210ENST00000592533 THNSL1Q8IYQ7 743 aa12.2□□□□□ -0.46
ZNF540-210ENST00000592533 CFAP61Q8NHU2 1237 aa12.2□□□□□ -0.46
ZNF540-210ENST00000592533 CPT1BQ92523 772 aa12.2□□□□□ -0.46
ZNF540-210ENST00000592533 ALKBH8Q96BT7 664 aaKnown RBP12.2□□□□□ -0.46
ZNF540-210ENST00000592533 ERP27Q96DN0 273 aa12.2□□□□□ -0.46
ZNF540-210ENST00000592533 FAXDC2Q96IV6 333 aa12.2□□□□□ -0.46
ZNF540-210ENST00000592533 MAK16Q9BXY0 300 aaKnown RBP12.2□□□□□ -0.46
ZNF540-210ENST00000592533 TLE6Q9H808 572 aa12.2□□□□□ -0.46
ZNF540-210ENST00000592533 DONSONQ9NYP3 566 aa12.2□□□□□ -0.46
ZNF540-210ENST00000592533 E7ENQ6 273 aa12.2□□□□□ -0.46
ZNF540-210ENST00000592533 SGK1O00141 431 aa12.2□□□□□ -0.46
ZNF540-210ENST00000592533 C2CD2LO14523 706 aa12.2□□□□□ -0.46
ZNF540-210ENST00000592533 HNRNPCL1O60812 293 aaKnown RBP12.2□□□□□ -0.46
ZNF540-210ENST00000592533 TOM1L1O75674 476 aa12.2□□□□□ -0.46
ZNF540-210ENST00000592533 CA4P22748 312 aa12.2□□□□□ -0.46
ZNF540-210ENST00000592533 ARL4CP56559 192 aa12.2□□□□□ -0.46
ZNF540-210ENST00000592533 SP4Q02446 784 aa12.2□□□□□ -0.46
ZNF540-210ENST00000592533 STXBP2Q15833 593 aa12.2□□□□□ -0.46
ZNF540-210ENST00000592533 KLHL38Q2WGJ6 581 aa12.2□□□□□ -0.46
ZNF540-210ENST00000592533 DCAF15Q66K64 600 aa12.2□□□□□ -0.46
ZNF540-210ENST00000592533 ERICH1Q86X53 443 aa12.2□□□□□ -0.46
ZNF540-210ENST00000592533 SPOCK2Q92563 424 aa12.2□□□□□ -0.46
ZNF540-210ENST00000592533 MIEF2Q96C03 454 aa12.2□□□□□ -0.46
ZNF540-210ENST00000592533 WDR83Q9BRX9 315 aaKnown RBP12.2□□□□□ -0.46
ZNF540-210ENST00000592533 SLCO1B3Q9NPD5 702 aa12.2□□□□□ -0.46
ZNF540-210ENST00000592533 LNPEPQ9UIQ6 1025 aa12.2□□□□□ -0.46
ZNF540-210ENST00000592533 MAFO75444 373 aaPredicted RBP12.2□□□□□ -0.46
ZNF540-210ENST00000592533 T-ENOLP0DO92 83 aa12.2□□□□□ -0.46
ZNF540-210ENST00000592533 GBP2P32456 591 aaPredicted RBP12.2□□□□□ -0.46
ZNF540-210ENST00000592533 ASPAP45381 313 aa12.2□□□□□ -0.46
ZNF540-210ENST00000592533 CTCFP49711 727 aaPredicted RBP12.2□□□□□ -0.46
ZNF540-210ENST00000592533 MYL6P60660 151 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms