RNA–Protein interactions for RNA: ENST00000592138.5

TPM4-215, Transcript of tropomyosin 4, humanhuman

TSL 2

Gene TPM4, Length 635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-215ENST00000592138 LRRTM3Q86VH5 581 aa10.38□□□□□ -0.75
TPM4-215ENST00000592138 DHX40Q8IX18 779 aaKnown RBP10.38□□□□□ -0.75
TPM4-215ENST00000592138 CRYBG2Q8N1P7 616 aa10.38□□□□□ -0.75
TPM4-215ENST00000592138 AOPEPQ8N6M6 819 aa10.38□□□□□ -0.75
TPM4-215ENST00000592138 B3GALNT2Q8NCR0 500 aa10.38□□□□□ -0.75
TPM4-215ENST00000592138 EHBP1Q8NDI1 1231 aa10.38□□□□□ -0.75
TPM4-215ENST00000592138 ANKRD20A12PQ8NF67 263 aa10.38□□□□□ -0.75
TPM4-215ENST00000592138 OR6B3Q8NGW1 331 aa10.38□□□□□ -0.75
TPM4-215ENST00000592138 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.38□□□□□ -0.75
TPM4-215ENST00000592138 SLC7A14Q8TBB6 771 aa10.38□□□□□ -0.75
TPM4-215ENST00000592138 MYCBPAPQ8TBZ2 947 aa10.38□□□□□ -0.75
TPM4-215ENST00000592138 RIPOR3Q96MK2 946 aa10.38□□□□□ -0.75
TPM4-215ENST00000592138 NT5C1BQ96P26 610 aa10.38□□□□□ -0.75
TPM4-215ENST00000592138 TMEM209Q96SK2 561 aa10.38□□□□□ -0.75
TPM4-215ENST00000592138 SYT15Q9BQS2 421 aa10.38□□□□□ -0.75
TPM4-215ENST00000592138 PRKD2Q9BZL6 878 aa10.38□□□□□ -0.75
TPM4-215ENST00000592138 SDCBP2Q9H190 292 aa10.38□□□□□ -0.75
TPM4-215ENST00000592138 HSD3B7Q9H2F3 369 aa10.38□□□□□ -0.75
TPM4-215ENST00000592138 CYP4F11Q9HBI6 524 aa10.38□□□□□ -0.75
TPM4-215ENST00000592138 GCNT4Q9P109 453 aa10.38□□□□□ -0.75
TPM4-215ENST00000592138 LIMA1Q9UHB6 759 aaKnown RBP10.38□□□□□ -0.75
TPM4-215ENST00000592138 PCDHB5Q9Y5E4 795 aa10.38□□□□□ -0.75
TPM4-215ENST00000592138 CCDC195A0A1B0GUA6 201 aa10.37□□□□□ -0.75
TPM4-215ENST00000592138 GRXCR2A6NFK2 248 aa10.37□□□□□ -0.75
TPM4-215ENST00000592138 SPDYE4A6NLX3 237 aa10.37□□□□□ -0.75
TPM4-215ENST00000592138 PRRG1O14668 218 aa10.37□□□□□ -0.75
TPM4-215ENST00000592138 MBTPS2O43462 519 aa10.37□□□□□ -0.75
TPM4-215ENST00000592138 XYLBO75191 536 aa10.37□□□□□ -0.75
TPM4-215ENST00000592138 LRRN2O75325 713 aa10.37□□□□□ -0.75
TPM4-215ENST00000592138 CILPO75339 1184 aa10.37□□□□□ -0.75
TPM4-215ENST00000592138 ACAT1P24752 427 aaKnown RBP10.37□□□□□ -0.75
TPM4-215ENST00000592138 MTHFRP42898 656 aa10.37□□□□□ -0.75
TPM4-215ENST00000592138 MAGEA11P43364 429 aa10.37□□□□□ -0.75
TPM4-215ENST00000592138 CDH8P55286 799 aa10.37□□□□□ -0.75
TPM4-215ENST00000592138 TFF2Q03403 129 aa10.37□□□□□ -0.75
TPM4-215ENST00000592138 IQCB1Q15051 598 aa10.37□□□□□ -0.75
TPM4-215ENST00000592138 KRT31Q15323 416 aa10.37□□□□□ -0.75
TPM4-215ENST00000592138 SMAD2Q15796 467 aaKnown RBP10.37□□□□□ -0.75
TPM4-215ENST00000592138 TRIM65Q6PJ69 517 aa10.37□□□□□ -0.75
TPM4-215ENST00000592138 VSTM1Q6UX27 236 aa10.37□□□□□ -0.75
TPM4-215ENST00000592138 CREBRFQ8IUR6 639 aa10.37□□□□□ -0.75
TPM4-215ENST00000592138 ZNF707Q96C28 371 aaPredicted RBP10.37□□□□□ -0.75
TPM4-215ENST00000592138 ASB2Q96Q27 587 aa10.37□□□□□ -0.75
TPM4-215ENST00000592138 NT5C1AQ9BXI3 368 aa10.37□□□□□ -0.75
TPM4-215ENST00000592138 INTS2Q9H0H0 1204 aaKnown RBP10.37□□□□□ -0.75
TPM4-215ENST00000592138 CRTAC1Q9NQ79 661 aa10.37□□□□□ -0.75
TPM4-215ENST00000592138 AVENQ9NQS1 362 aaPredicted RBP10.37□□□□□ -0.75
TPM4-215ENST00000592138 CISHQ9NSE2 258 aa10.37□□□□□ -0.75
TPM4-215ENST00000592138 ASB3Q9Y575 518 aa10.37□□□□□ -0.75
TPM4-215ENST00000592138 NME7Q9Y5B8 376 aa10.37□□□□□ -0.75
TPM4-215ENST00000592138 INSL5Q9Y5Q6 135 aa10.37□□□□□ -0.75
TPM4-215ENST00000592138 MYBPHLA2RUH7 354 aa10.36□□□□□ -0.75
TPM4-215ENST00000592138 BECN2A8MW95 431 aa10.36□□□□□ -0.75
TPM4-215ENST00000592138 RFPL2O75678 378 aa10.36□□□□□ -0.75
TPM4-215ENST00000592138 SEC24AO95486 1093 aa10.36□□□□□ -0.75
TPM4-215ENST00000592138 LRG1P02750 347 aa10.36□□□□□ -0.75
TPM4-215ENST00000592138 WEE2P0C1S8 567 aa10.36□□□□□ -0.75
TPM4-215ENST00000592138 SPATA31D3P0C874 917 aa10.36□□□□□ -0.75
TPM4-215ENST00000592138 HAPLN1P10915 354 aaPredicted RBP10.36□□□□□ -0.75
TPM4-215ENST00000592138 PTPN1P18031 435 aaKnown RBP10.36□□□□□ -0.75
TPM4-215ENST00000592138 RFX1P22670 979 aa10.36□□□□□ -0.75
TPM4-215ENST00000592138 RAP1GAPP47736 663 aa10.36□□□□□ -0.75
TPM4-215ENST00000592138 NDST1P52848 882 aa10.36□□□□□ -0.75
TPM4-215ENST00000592138 ZNF445P59923 1031 aa10.36□□□□□ -0.75
TPM4-215ENST00000592138 DUSP4Q13115 394 aa10.36□□□□□ -0.75
TPM4-215ENST00000592138 CBX2Q14781 532 aaPredicted RBP10.36□□□□□ -0.75
TPM4-215ENST00000592138 HSP90AA4PQ58FG1 418 aa10.36□□□□□ -0.75
TPM4-215ENST00000592138 ATAT1Q5SQI0 421 aa10.36□□□□□ -0.75
TPM4-215ENST00000592138 RARS2Q5T160 578 aaKnown RBP10.36□□□□□ -0.75
TPM4-215ENST00000592138 PTCRAQ6ISU1 281 aaPredicted RBP10.36□□□□□ -0.75
TPM4-215ENST00000592138 LRSAM1Q6UWE0 723 aa10.36□□□□□ -0.75
TPM4-215ENST00000592138 TMC5Q6UXY8 1006 aa10.36□□□□□ -0.75
TPM4-215ENST00000592138 SPATA31D4Q6ZUB0 917 aa10.36□□□□□ -0.75
TPM4-215ENST00000592138 APTXQ7Z2E3 356 aaKnown RBP10.36□□□□□ -0.75
TPM4-215ENST00000592138 SPATA2LQ8IUW3 424 aaPredicted RBP10.36□□□□□ -0.75
TPM4-215ENST00000592138 UBR7Q8N806 425 aa10.36□□□□□ -0.75
TPM4-215ENST00000592138 ATAD1Q8NBU5 361 aa10.36□□□□□ -0.75
TPM4-215ENST00000592138 LEMD2Q8NC56 503 aa10.36□□□□□ -0.75
TPM4-215ENST00000592138 FAM200AQ8TCP9 573 aa10.36□□□□□ -0.75
TPM4-215ENST00000592138 ADAMTS19Q8TE59 1207 aa10.36□□□□□ -0.75
TPM4-215ENST00000592138 WHAMMQ8TF30 809 aa10.36□□□□□ -0.75
TPM4-215ENST00000592138 TATDN2Q93075 761 aa10.36□□□□□ -0.75
TPM4-215ENST00000592138 MYLPFQ96A32 169 aa10.36□□□□□ -0.75
TPM4-215ENST00000592138 PCED1BQ96HM7 432 aa10.36□□□□□ -0.75
TPM4-215ENST00000592138 PGLYRP2Q96PD5 576 aa10.36□□□□□ -0.75
TPM4-215ENST00000592138 ELOVL4Q9GZR5 314 aa10.36□□□□□ -0.75
TPM4-215ENST00000592138 CRISPLD1Q9H336 500 aa10.36□□□□□ -0.75
TPM4-215ENST00000592138 TMLHEQ9NVH6 421 aa10.36□□□□□ -0.75
TPM4-215ENST00000592138 APEX2Q9UBZ4 518 aa10.36□□□□□ -0.75
TPM4-215ENST00000592138 PRKAG3Q9UGI9 489 aa10.36□□□□□ -0.75
TPM4-215ENST00000592138 GTF3C4Q9UKN8 822 aa10.36□□□□□ -0.75
TPM4-215ENST00000592138 DAAM1Q9Y4D1 1078 aa10.36□□□□□ -0.75
TPM4-215ENST00000592138 USP15Q9Y4E8 981 aaPredicted RBP10.36□□□□□ -0.75
TPM4-215ENST00000592138 YIPF1Q9Y548 306 aa10.36□□□□□ -0.75
TPM4-215ENST00000592138 USP34Q70CQ2 3546 aa10.36□□□□□ -0.75
TPM4-215ENST00000592138 LGALS16A8MUM7 142 aa10.35□□□□□ -0.75
TPM4-215ENST00000592138 HCRTO43612 131 aa10.35□□□□□ -0.75
TPM4-215ENST00000592138 MICAL2O94851 1124 aa10.35□□□□□ -0.75
TPM4-215ENST00000592138 PDGFRBP09619 1106 aa10.35□□□□□ -0.75
TPM4-215ENST00000592138 BMP1P13497 986 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms