RNA–Protein interactions for RNA: ENST00000592106.5

VMP1-214, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-214ENST00000592106 STK38Q15208 465 aa10.91□□□□□ -0.66
VMP1-214ENST00000592106 SURF1Q15526 300 aa10.91□□□□□ -0.66
VMP1-214ENST00000592106 STXBP5Q5T5C0 1151 aa10.91□□□□□ -0.66
VMP1-214ENST00000592106 TSSK4Q6SA08 328 aa10.91□□□□□ -0.66
VMP1-214ENST00000592106 CRELD2Q6UXH1 353 aaPredicted RBP10.91□□□□□ -0.66
VMP1-214ENST00000592106 USP49Q70CQ1 688 aa10.91□□□□□ -0.66
VMP1-214ENST00000592106 ZNF687Q8N1G0 1237 aa10.91□□□□□ -0.66
VMP1-214ENST00000592106 SPEM1Q8N4L4 309 aa10.91□□□□□ -0.66
VMP1-214ENST00000592106 CELF5Q8N6W0 485 aaKnown RBP10.91□□□□□ -0.66
VMP1-214ENST00000592106 LEO1Q8WVC0 666 aaPredicted RBP10.91□□□□□ -0.66
VMP1-214ENST00000592106 MRPS31Q92665 395 aaKnown RBP10.91□□□□□ -0.66
VMP1-214ENST00000592106 DNAJC19Q96DA6 116 aa10.91□□□□□ -0.66
VMP1-214ENST00000592106 SAAL1Q96ER3 474 aa10.91□□□□□ -0.66
VMP1-214ENST00000592106 STRA6Q9BX79 667 aa10.91□□□□□ -0.66
VMP1-214ENST00000592106 CUEDC2Q9H467 287 aa10.91□□□□□ -0.66
VMP1-214ENST00000592106 ABCB6Q9NP58 842 aa10.91□□□□□ -0.66
VMP1-214ENST00000592106 PANK4Q9NVE7 773 aa10.91□□□□□ -0.66
VMP1-214ENST00000592106 AGAP1Q9UPQ3 857 aa10.91□□□□□ -0.66
VMP1-214ENST00000592106 FAM186AA6NE01 2351 aa10.91□□□□□ -0.66
VMP1-214ENST00000592106 NCANO14594 1321 aa10.9□□□□□ -0.66
VMP1-214ENST00000592106 FRMD3A2A2Y4 597 aa10.9□□□□□ -0.66
VMP1-214ENST00000592106 SOBPA7XYQ1 873 aa10.9□□□□□ -0.66
VMP1-214ENST00000592106 PRR5-ARHGAP8B1AHC4 643 aa10.9□□□□□ -0.66
VMP1-214ENST00000592106 PRPF40AO75400 957 aaKnown RBP10.9□□□□□ -0.66
VMP1-214ENST00000592106 TNNC2P02585 160 aa10.9□□□□□ -0.66
VMP1-214ENST00000592106 KRT19P08727 400 aa10.9□□□□□ -0.66
VMP1-214ENST00000592106 CHRNB1P11230 501 aa10.9□□□□□ -0.66
VMP1-214ENST00000592106 ADSSP30520 456 aa10.9□□□□□ -0.66
VMP1-214ENST00000592106 CTHP32929 405 aa10.9□□□□□ -0.66
VMP1-214ENST00000592106 RBP5P82980 135 aa10.9□□□□□ -0.66
VMP1-214ENST00000592106 ARHGAP8P85298 464 aa10.9□□□□□ -0.66
VMP1-214ENST00000592106 AMPD3Q01432 767 aa10.9□□□□□ -0.66
VMP1-214ENST00000592106 LMNB2Q03252 620 aa10.9□□□□□ -0.66
VMP1-214ENST00000592106 MYO1EQ12965 1108 aa10.9□□□□□ -0.66
VMP1-214ENST00000592106 FZD5Q13467 585 aa10.9□□□□□ -0.66
VMP1-214ENST00000592106 SLC39A14Q15043 492 aa10.9□□□□□ -0.66
VMP1-214ENST00000592106 ITPRIPL2Q3MIP1 535 aa10.9□□□□□ -0.66
VMP1-214ENST00000592106 ADGRF2Q8IZF7 708 aa10.9□□□□□ -0.66
VMP1-214ENST00000592106 GPD1LQ8N335 351 aa10.9□□□□□ -0.66
VMP1-214ENST00000592106 SYNPOQ8N3V7 929 aa10.9□□□□□ -0.66
VMP1-214ENST00000592106 DCLK2Q8N568 766 aa10.9□□□□□ -0.66
VMP1-214ENST00000592106 CSGALNACT2Q8N6G5 542 aa10.9□□□□□ -0.66
VMP1-214ENST00000592106 ZNF454Q8N9F8 522 aa10.9□□□□□ -0.66
VMP1-214ENST00000592106 GIPC2Q8TF65 315 aa10.9□□□□□ -0.66
VMP1-214ENST00000592106 RMDN1Q96DB5 314 aa10.9□□□□□ -0.66
VMP1-214ENST00000592106 ZNF396Q96N95 335 aaPredicted RBP10.9□□□□□ -0.66
VMP1-214ENST00000592106 USP28Q96RU2 1077 aa10.9□□□□□ -0.66
VMP1-214ENST00000592106 ACBD6Q9BR61 282 aa10.9□□□□□ -0.66
VMP1-214ENST00000592106 MKNK1Q9BUB5 465 aa10.9□□□□□ -0.66
VMP1-214ENST00000592106 TNMDQ9H2S6 317 aa10.9□□□□□ -0.66
VMP1-214ENST00000592106 USP18Q9UMW8 372 aa10.9□□□□□ -0.66
VMP1-214ENST00000592106 MAGED2Q9UNF1 606 aaPredicted RBP10.9□□□□□ -0.66
VMP1-214ENST00000592106 PTPRZ1P23471 2315 aaPredicted RBP10.9□□□□□ -0.67
VMP1-214ENST00000592106 SCN1AP35498 2009 aa10.89□□□□□ -0.67
VMP1-214ENST00000592106 SHISA7A6NL88 538 aa10.89□□□□□ -0.67
VMP1-214ENST00000592106 K7ELQ4 463 aaPredicted RBP10.89□□□□□ -0.67
VMP1-214ENST00000592106 STX6O43752 255 aa10.89□□□□□ -0.67
VMP1-214ENST00000592106 PAPSS2O95340 614 aaPredicted RBP10.89□□□□□ -0.67
VMP1-214ENST00000592106 PRAMEF12O95522 483 aa10.89□□□□□ -0.67
VMP1-214ENST00000592106 PDIA4P13667 645 aaKnown RBP10.89□□□□□ -0.67
VMP1-214ENST00000592106 CNR2P34972 360 aa10.89□□□□□ -0.67
VMP1-214ENST00000592106 LHX1P48742 406 aa10.89□□□□□ -0.67
VMP1-214ENST00000592106 NASPP49321 788 aaPredicted RBP10.89□□□□□ -0.67
VMP1-214ENST00000592106 INTS6LQ5JSJ4 861 aaKnown RBP10.89□□□□□ -0.67
VMP1-214ENST00000592106 LAIR1Q6GTX8 287 aa10.89□□□□□ -0.67
VMP1-214ENST00000592106 CC2D1AQ6P1N0 951 aaPredicted RBP10.89□□□□□ -0.67
VMP1-214ENST00000592106 FAM173BQ6P4H8 233 aa10.89□□□□□ -0.67
VMP1-214ENST00000592106 C4orf50Q6ZRC1 276 aa10.89□□□□□ -0.67
VMP1-214ENST00000592106 PRR23BQ6ZRT6 265 aa10.89□□□□□ -0.67
VMP1-214ENST00000592106 SPATA2LQ8IUW3 424 aaPredicted RBP10.89□□□□□ -0.67
VMP1-214ENST00000592106 CMTM8Q8IZV2 173 aa10.89□□□□□ -0.67
VMP1-214ENST00000592106 PDCL2Q8N4E4 241 aa10.89□□□□□ -0.67
VMP1-214ENST00000592106 TOP6BLQ8N6T0 577 aa10.89□□□□□ -0.67
VMP1-214ENST00000592106 PDILTQ8N807 584 aa10.89□□□□□ -0.67
VMP1-214ENST00000592106 C1orf127Q8N9H9 656 aa10.89□□□□□ -0.67
VMP1-214ENST00000592106 FSIP1Q8NA03 581 aa10.89□□□□□ -0.67
VMP1-214ENST00000592106 RSPRY1Q96DX4 576 aa10.89□□□□□ -0.67
VMP1-214ENST00000592106 FUBP3Q96I24 572 aaKnown RBP eCLIP10.89□□□□□ -0.67
VMP1-214ENST00000592106 PI4K2AQ9BTU6 479 aa10.89□□□□□ -0.67
VMP1-214ENST00000592106 MAGEF1Q9HAY2 307 aa10.89□□□□□ -0.67
VMP1-214ENST00000592106 KIAA1586Q9HCI6 787 aa10.89□□□□□ -0.67
VMP1-214ENST00000592106 GDAP2Q9NXN4 497 aa10.89□□□□□ -0.67
VMP1-214ENST00000592106 DDX43Q9NXZ2 648 aaKnown RBP10.89□□□□□ -0.67
VMP1-214ENST00000592106 CDV3Q9UKY7 258 aaKnown RBP10.89□□□□□ -0.67
VMP1-214ENST00000592106 L1RE1Q9UN81 338 aa10.89□□□□□ -0.67
VMP1-214ENST00000592106 MTMR6Q9Y217 621 aa10.89□□□□□ -0.67
VMP1-214ENST00000592106 SNX9Q9Y5X1 595 aa10.89□□□□□ -0.67
VMP1-214ENST00000592106 CACNA1IQ9P0X4 2223 aa10.89□□□□□ -0.67
VMP1-214ENST00000592106 UBE4BO95155 1302 aa10.88□□□□□ -0.67
VMP1-214ENST00000592106 GOLGA8IPA6NC78 632 aa10.88□□□□□ -0.67
VMP1-214ENST00000592106 ZNF233A6NK53 670 aa10.88□□□□□ -0.67
VMP1-214ENST00000592106 GOLGA8JA6NMD2 632 aa10.88□□□□□ -0.67
VMP1-214ENST00000592106 EIF3DO15371 548 aaKnown RBP eCLIP10.88□□□□□ -0.67
VMP1-214ENST00000592106 PPP6R2O75170 966 aa10.88□□□□□ -0.67
VMP1-214ENST00000592106 PRPF6O94906 941 aaKnown RBP10.88□□□□□ -0.67
VMP1-214ENST00000592106 SOX9P48436 509 aa10.88□□□□□ -0.67
VMP1-214ENST00000592106 PDE6CP51160 858 aa10.88□□□□□ -0.67
VMP1-214ENST00000592106 CASP5P51878 434 aa10.88□□□□□ -0.67
VMP1-214ENST00000592106 NLRP12P59046 1061 aa10.88□□□□□ -0.67
VMP1-214ENST00000592106 ASIC1P78348 528 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms