RNA–Protein interactions for RNA: ENST00000591782.1

VMP1-212, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 729 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-212ENST00000591782 KIAA1586Q9HCI6 787 aa4.26□□□□□ -1.73
VMP1-212ENST00000591782 SACM1LQ9NTJ5 587 aa4.26□□□□□ -1.73
VMP1-212ENST00000591782 SYBUQ9NX95 663 aa4.26□□□□□ -1.73
VMP1-212ENST00000591782 SPATA31A3Q5VYP0 1347 aa4.25□□□□□ -1.73
VMP1-212ENST00000591782 A0A0B4J269 797 aa4.25□□□□□ -1.73
VMP1-212ENST00000591782 HMGB1P1B2RPK0 211 aaPredicted RBP4.25□□□□□ -1.73
VMP1-212ENST00000591782 CYR61O00622 381 aa4.25□□□□□ -1.73
VMP1-212ENST00000591782 SOAT2O75908 522 aa4.25□□□□□ -1.73
VMP1-212ENST00000591782 SLPIP03973 132 aa4.25□□□□□ -1.73
VMP1-212ENST00000591782 SRGNP10124 158 aa4.25□□□□□ -1.73
VMP1-212ENST00000591782 TRIM27P14373 513 aa4.25□□□□□ -1.73
VMP1-212ENST00000591782 VIPR2P41587 438 aa4.25□□□□□ -1.73
VMP1-212ENST00000591782 HNRNPMP52272 730 aaKnown RBP eCLIP4.25□□□□□ -1.73
VMP1-212ENST00000591782 FMO1Q01740 532 aa4.25□□□□□ -1.73
VMP1-212ENST00000591782 FSTL1Q12841 308 aa4.25□□□□□ -1.73
VMP1-212ENST00000591782 TUBB3Q13509 450 aa4.25□□□□□ -1.73
VMP1-212ENST00000591782 RAB32Q13637 225 aa4.25□□□□□ -1.73
VMP1-212ENST00000591782 HLTFQ14527 1009 aaKnown RBP eCLIP4.25□□□□□ -1.73
VMP1-212ENST00000591782 IQCB1Q15051 598 aa4.25□□□□□ -1.73
VMP1-212ENST00000591782 C3orf38Q5JPI3 329 aa4.25□□□□□ -1.73
VMP1-212ENST00000591782 RBM20Q5T481 1227 aaKnown RBP4.25□□□□□ -1.73
VMP1-212ENST00000591782 CCDC181Q5TID7 509 aa4.25□□□□□ -1.73
VMP1-212ENST00000591782 LAIR1Q6GTX8 287 aa4.25□□□□□ -1.73
VMP1-212ENST00000591782 KSR2Q6VAB6 950 aa4.25□□□□□ -1.73
VMP1-212ENST00000591782 SESTD1Q86VW0 696 aa4.25□□□□□ -1.73
VMP1-212ENST00000591782 MICU3Q86XE3 530 aa4.25□□□□□ -1.73
VMP1-212ENST00000591782 LDLRAD3Q86YD5 345 aa4.25□□□□□ -1.73
VMP1-212ENST00000591782 CERS3Q8IU89 383 aa4.25□□□□□ -1.73
VMP1-212ENST00000591782 AMER2Q8N7J2 671 aa4.25□□□□□ -1.73
VMP1-212ENST00000591782 LINC00476Q8WZB0 136 aa4.25□□□□□ -1.73
VMP1-212ENST00000591782 CAVIN3Q969G5 261 aa4.25□□□□□ -1.73
VMP1-212ENST00000591782 OSBPL9Q96SU4 736 aa4.25□□□□□ -1.73
VMP1-212ENST00000591782 PRRX2Q99811 253 aa4.25□□□□□ -1.73
VMP1-212ENST00000591782 AIFM2Q9BRQ8 373 aa4.25□□□□□ -1.73
VMP1-212ENST00000591782 TTPALQ9BTX7 342 aa4.25□□□□□ -1.73
VMP1-212ENST00000591782 TMPRSS5Q9H3S3 457 aa4.25□□□□□ -1.73
VMP1-212ENST00000591782 ZNF287Q9HBT7 754 aa4.25□□□□□ -1.73
VMP1-212ENST00000591782 KCTD5Q9NXV2 234 aa4.25□□□□□ -1.73
VMP1-212ENST00000591782 OGDHLQ9ULD0 1010 aa4.25□□□□□ -1.73
VMP1-212ENST00000591782 EPN1Q9Y6I3 576 aaPredicted RBP4.25□□□□□ -1.73
VMP1-212ENST00000591782 ABCC9O60706 1549 aa4.25□□□□□ -1.73
VMP1-212ENST00000591782 MAST3O60307 1309 aa4.24□□□□□ -1.73
VMP1-212ENST00000591782 TMEM191CA6NGB0 347 aa4.24□□□□□ -1.73
VMP1-212ENST00000591782 APAF1O14727 1248 aa4.24□□□□□ -1.73
VMP1-212ENST00000591782 TRIAP1O43715 76 aa4.24□□□□□ -1.73
VMP1-212ENST00000591782 AKAP8O43823 692 aaKnown RBP4.24□□□□□ -1.73
VMP1-212ENST00000591782 PQBP1O60828 265 aaKnown RBP4.24□□□□□ -1.73
VMP1-212ENST00000591782 CAND2O75155 1236 aa4.24□□□□□ -1.73
VMP1-212ENST00000591782 ATXN1LP0C7T5 689 aaKnown RBP4.24□□□□□ -1.73
VMP1-212ENST00000591782 HKR1P10072 659 aa4.24□□□□□ -1.73
VMP1-212ENST00000591782 ZKSCAN1P17029 563 aaPredicted RBP4.24□□□□□ -1.73
VMP1-212ENST00000591782 TGM1P22735 817 aa4.24□□□□□ -1.73
VMP1-212ENST00000591782 CD6P30203 668 aa4.24□□□□□ -1.73
VMP1-212ENST00000591782 AVPR1BP47901 424 aa4.24□□□□□ -1.73
VMP1-212ENST00000591782 PXNP49023 591 aaPredicted RBP4.24□□□□□ -1.73
VMP1-212ENST00000591782 SEC24CP53992 1094 aa4.24□□□□□ -1.73
VMP1-212ENST00000591782 LOXL3P58215 753 aa4.24□□□□□ -1.73
VMP1-212ENST00000591782 RPS16P62249 146 aaKnown RBP4.24□□□□□ -1.73
VMP1-212ENST00000591782 BLOC1S1P78537 153 aa4.24□□□□□ -1.73
VMP1-212ENST00000591782 PURAQ00577 322 aaKnown RBP4.24□□□□□ -1.73
VMP1-212ENST00000591782 TAP1Q03518 808 aa4.24□□□□□ -1.73
VMP1-212ENST00000591782 SAFBQ15424 915 aaKnown RBP eCLIP4.24□□□□□ -1.73
VMP1-212ENST00000591782 SLC44A4Q53GD3 710 aa4.24□□□□□ -1.73
VMP1-212ENST00000591782 HECTD2Q5U5R9 776 aa4.24□□□□□ -1.73
VMP1-212ENST00000591782 VPS53Q5VIR6 699 aa4.24□□□□□ -1.73
VMP1-212ENST00000591782 DCAF12L1Q5VU92 463 aa4.24□□□□□ -1.73
VMP1-212ENST00000591782 VWA1Q6PCB0 445 aa4.24□□□□□ -1.73
VMP1-212ENST00000591782 LAYNQ6UX15 382 aa4.24□□□□□ -1.73
VMP1-212ENST00000591782 Q6ZNX1 250 aa4.24□□□□□ -1.73
VMP1-212ENST00000591782 ZNF280BQ86YH2 543 aa4.24□□□□□ -1.73
VMP1-212ENST00000591782 CNPY4Q8N129 248 aa4.24□□□□□ -1.73
VMP1-212ENST00000591782 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.24□□□□□ -1.73
VMP1-212ENST00000591782 B3GALNT2Q8NCR0 500 aa4.24□□□□□ -1.73
VMP1-212ENST00000591782 SUPT20HQ8NEM7 779 aa4.24□□□□□ -1.73
VMP1-212ENST00000591782 MYCBPAPQ8TBZ2 947 aa4.24□□□□□ -1.73
VMP1-212ENST00000591782 RAPGEF4Q8WZA2 1011 aa4.24□□□□□ -1.73
VMP1-212ENST00000591782 NMD3Q96D46 503 aaKnown RBP4.24□□□□□ -1.73
VMP1-212ENST00000591782 COQ10AQ96MF6 247 aa4.24□□□□□ -1.73
VMP1-212ENST00000591782 MOGAT1Q96PD6 335 aa4.24□□□□□ -1.73
VMP1-212ENST00000591782 MESP1Q9BRJ9 268 aa4.24□□□□□ -1.73
VMP1-212ENST00000591782 TPSD1Q9BZJ3 242 aa4.24□□□□□ -1.73
VMP1-212ENST00000591782 ZNF518BQ9C0D4 1074 aa4.24□□□□□ -1.73
VMP1-212ENST00000591782 MS4A7Q9GZW8 240 aaPredicted RBP4.24□□□□□ -1.73
VMP1-212ENST00000591782 NUP62CLQ9H1M0 184 aa4.24□□□□□ -1.73
VMP1-212ENST00000591782 COL20A1Q9P218 1284 aa4.24□□□□□ -1.73
VMP1-212ENST00000591782 AFF4Q9UHB7 1163 aaKnown RBP4.24□□□□□ -1.73
VMP1-212ENST00000591782 NAP1L2Q9ULW6 460 aaPredicted RBP4.24□□□□□ -1.73
VMP1-212ENST00000591782 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.24□□□□□ -1.73
VMP1-212ENST00000591782 TRIM43BA6NCK2 446 aa4.23□□□□□ -1.73
VMP1-212ENST00000591782 PMM2O15305 246 aa4.23□□□□□ -1.73
VMP1-212ENST00000591782 FOXN1O15353 648 aa4.23□□□□□ -1.73
VMP1-212ENST00000591782 YY2O15391 372 aa4.23□□□□□ -1.73
VMP1-212ENST00000591782 PROM1O43490 865 aa4.23□□□□□ -1.73
VMP1-212ENST00000591782 KRT18P05783 430 aaKnown RBP4.23□□□□□ -1.73
VMP1-212ENST00000591782 CYP2C9P11712 490 aa4.23□□□□□ -1.73
VMP1-212ENST00000591782 SLC5A1P13866 664 aa4.23□□□□□ -1.73
VMP1-212ENST00000591782 ANP32AP39687 249 aaKnown RBP4.23□□□□□ -1.73
VMP1-212ENST00000591782 WNT3P56703 355 aa4.23□□□□□ -1.73
VMP1-212ENST00000591782 FOXI1Q12951 378 aa4.23□□□□□ -1.73
VMP1-212ENST00000591782 MPP3Q13368 585 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms