RNA–Protein interactions for RNA: ENST00000591622.1

CIRBP-233, Transcript of cold inducible RNA binding protein, humanhuman

TSL 4

Gene CIRBP, Length 548 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-233ENST00000591622 SGSM1Q2NKQ1 1148 aa17.55■□□□□ 0.4
CIRBP-233ENST00000591622 CFAP221Q4G0U5 840 aa17.55■□□□□ 0.4
CIRBP-233ENST00000591622 ZNF667Q5HYK9 610 aa17.55■□□□□ 0.4
CIRBP-233ENST00000591622 ANKRD40Q6AI12 368 aa17.55■□□□□ 0.4
CIRBP-233ENST00000591622 ISM2Q6H9L7 571 aa17.55■□□□□ 0.4
CIRBP-233ENST00000591622 SPATA2LQ8IUW3 424 aaPredicted RBP17.55■□□□□ 0.4
CIRBP-233ENST00000591622 EEF2KMTQ96G04 330 aa17.55■□□□□ 0.4
CIRBP-233ENST00000591622 TSG101Q99816 390 aa17.55■□□□□ 0.4
CIRBP-233ENST00000591622 LPIN3Q9BQK8 851 aa17.55■□□□□ 0.4
CIRBP-233ENST00000591622 SYT15Q9BQS2 421 aa17.55■□□□□ 0.4
CIRBP-233ENST00000591622 MKNK1Q9BUB5 465 aa17.55■□□□□ 0.4
CIRBP-233ENST00000591622 A0A1W2PRU2 124 aa17.54■□□□□ 0.4
CIRBP-233ENST00000591622 FGF19O95750 216 aa17.54■□□□□ 0.4
CIRBP-233ENST00000591622 TRIM49P0CI25 452 aa17.54■□□□□ 0.4
CIRBP-233ENST00000591622 TRIM49CP0CI26 452 aa17.54■□□□□ 0.4
CIRBP-233ENST00000591622 GJA1P17302 382 aa17.54■□□□□ 0.4
CIRBP-233ENST00000591622 CYP2F1P24903 491 aa17.54■□□□□ 0.4
CIRBP-233ENST00000591622 PMS1P54277 932 aaKnown RBP17.54■□□□□ 0.4
CIRBP-233ENST00000591622 PSMC1P62191 440 aaKnown RBP17.54■□□□□ 0.4
CIRBP-233ENST00000591622 LRRC63Q05C16 580 aa17.54■□□□□ 0.4
CIRBP-233ENST00000591622 PPP3CAQ08209 521 aa17.54■□□□□ 0.4
CIRBP-233ENST00000591622 STIM1Q13586 685 aa17.54■□□□□ 0.4
CIRBP-233ENST00000591622 MAPRE1Q15691 268 aaKnown RBP17.54■□□□□ 0.4
CIRBP-233ENST00000591622 FBXL6Q8N531 539 aa17.54■□□□□ 0.4
CIRBP-233ENST00000591622 OR6B3Q8NGW1 331 aa17.54■□□□□ 0.4
CIRBP-233ENST00000591622 SHKBP1Q8TBC3 707 aa17.54■□□□□ 0.4
CIRBP-233ENST00000591622 GIPC2Q8TF65 315 aa17.54■□□□□ 0.4
CIRBP-233ENST00000591622 TAF4BQ92750 862 aa17.54■□□□□ 0.4
CIRBP-233ENST00000591622 FUBP3Q96I24 572 aaKnown RBP eCLIP17.54■□□□□ 0.4
CIRBP-233ENST00000591622 ZNF334Q9HCZ1 680 aaPredicted RBP17.54■□□□□ 0.4
CIRBP-233ENST00000591622 CRTAC1Q9NQ79 661 aa17.54■□□□□ 0.4
CIRBP-233ENST00000591622 PSMA7O14818 248 aa17.53■□□□□ 0.4
CIRBP-233ENST00000591622 ECI2O75521 394 aa17.53■□□□□ 0.4
CIRBP-233ENST00000591622 CLSTN1O94985 981 aa17.53■□□□□ 0.4
CIRBP-233ENST00000591622 PDGFBP01127 241 aaPredicted RBP17.53■□□□□ 0.4
CIRBP-233ENST00000591622 CFHP08603 1231 aa17.53■□□□□ 0.4
CIRBP-233ENST00000591622 EPB41P11171 864 aaKnown RBP17.53■□□□□ 0.4
CIRBP-233ENST00000591622 CD44P16070 742 aaKnown RBP17.53■□□□□ 0.4
CIRBP-233ENST00000591622 BMP6P22004 513 aa17.53■□□□□ 0.4
CIRBP-233ENST00000591622 PPP1R2P41236 205 aa17.53■□□□□ 0.4
CIRBP-233ENST00000591622 GCLMP48507 274 aa17.53■□□□□ 0.4
CIRBP-233ENST00000591622 RPL10AP62906 217 aaKnown RBP17.53■□□□□ 0.4
CIRBP-233ENST00000591622 FKBP3Q00688 224 aaKnown RBP17.53■□□□□ 0.4
CIRBP-233ENST00000591622 MORC3Q14149 939 aa17.53■□□□□ 0.4
CIRBP-233ENST00000591622 TEAD2Q15562 447 aa17.53■□□□□ 0.4
CIRBP-233ENST00000591622 TAF12Q16514 161 aa17.53■□□□□ 0.4
CIRBP-233ENST00000591622 FAM78AQ5JUQ0 283 aa17.53■□□□□ 0.4
CIRBP-233ENST00000591622 C4orf50Q6ZRC1 276 aa17.53■□□□□ 0.4
CIRBP-233ENST00000591622 GAREM2Q75VX8 874 aa17.53■□□□□ 0.4
CIRBP-233ENST00000591622 ZC3H3Q8IXZ2 948 aaKnown RBP17.53■□□□□ 0.4
CIRBP-233ENST00000591622 MYCBPAPQ8TBZ2 947 aa17.53■□□□□ 0.4
CIRBP-233ENST00000591622 GPR152Q8TDT2 470 aa17.53■□□□□ 0.4
CIRBP-233ENST00000591622 ELMO3Q96BJ8 720 aa17.53■□□□□ 0.4
CIRBP-233ENST00000591622 DHTKD1Q96HY7 919 aaPredicted RBP17.53■□□□□ 0.4
CIRBP-233ENST00000591622 ZSWIM3Q96MP5 696 aa17.53■□□□□ 0.4
CIRBP-233ENST00000591622 KXD1Q9BQD3 176 aa17.53■□□□□ 0.4
CIRBP-233ENST00000591622 GPR88Q9GZN0 384 aa17.53■□□□□ 0.4
CIRBP-233ENST00000591622 WNT16Q9UBV4 365 aa17.53■□□□□ 0.4
CIRBP-233ENST00000591622 FBXL21Q9UKT6 434 aa17.53■□□□□ 0.4
CIRBP-233ENST00000591622 NME7Q9Y5B8 376 aa17.53■□□□□ 0.4
CIRBP-233ENST00000591622 NOTCH4Q99466 2003 aa17.53■□□□□ 0.4
CIRBP-233ENST00000591622 TRIM49BA6NDI0 452 aa17.52■□□□□ 0.4
CIRBP-233ENST00000591622 ASS1P00966 412 aaKnown RBP17.52■□□□□ 0.4
CIRBP-233ENST00000591622 HLA-DRAP01903 254 aa17.52■□□□□ 0.4
CIRBP-233ENST00000591622 P4HA1P13674 534 aa17.52■□□□□ 0.4
CIRBP-233ENST00000591622 CCNE1P24864 410 aa17.52■□□□□ 0.4
CIRBP-233ENST00000591622 GABRR2P28476 465 aa17.52■□□□□ 0.4
CIRBP-233ENST00000591622 GTF2H1P32780 548 aa17.52■□□□□ 0.4
CIRBP-233ENST00000591622 PIK3CAP42336 1068 aa17.52■□□□□ 0.4
CIRBP-233ENST00000591622 MAGEA11P43364 429 aa17.52■□□□□ 0.4
CIRBP-233ENST00000591622 GPR15P49685 360 aa17.52■□□□□ 0.4
CIRBP-233ENST00000591622 CDH8P55286 799 aa17.52■□□□□ 0.4
CIRBP-233ENST00000591622 DDR2Q16832 855 aa17.52■□□□□ 0.4
CIRBP-233ENST00000591622 TANGO2Q6ICL3 276 aa17.52■□□□□ 0.4
CIRBP-233ENST00000591622 CLEC17AQ6ZS10 378 aa17.52■□□□□ 0.4
CIRBP-233ENST00000591622 SUGP1Q8IWZ8 645 aaKnown RBP17.52■□□□□ 0.4
CIRBP-233ENST00000591622 SMARCD2Q92925 531 aa17.52■□□□□ 0.4
CIRBP-233ENST00000591622 MYLPFQ96A32 169 aa17.52■□□□□ 0.4
CIRBP-233ENST00000591622 ELSPBP1Q96BH3 223 aa17.52■□□□□ 0.4
CIRBP-233ENST00000591622 ASB16Q96NS5 453 aa17.52■□□□□ 0.4
CIRBP-233ENST00000591622 ATXN3LQ9H3M9 355 aa17.52■□□□□ 0.4
CIRBP-233ENST00000591622 SMYD3Q9H7B4 428 aa17.52■□□□□ 0.4
CIRBP-233ENST00000591622 IL21Q9HBE4 155 aa17.52■□□□□ 0.4
CIRBP-233ENST00000591622 TMEM8AQ9HCN3 771 aa17.52■□□□□ 0.4
CIRBP-233ENST00000591622 SLC2A4RGQ9NR83 387 aa17.52■□□□□ 0.4
CIRBP-233ENST00000591622 MAGEC2Q9UBF1 373 aaPredicted RBP17.52■□□□□ 0.4
CIRBP-233ENST00000591622 RAPGEFL1Q9UHV5 662 aa17.52■□□□□ 0.4
CIRBP-233ENST00000591622 HCN4Q9Y3Q4 1203 aa17.52■□□□□ 0.4
CIRBP-233ENST00000591622 TECTAO75443 2155 aa17.52■□□□□ 0.39
CIRBP-233ENST00000591622 A8MXQ7 604 aa17.51■□□□□ 0.39
CIRBP-233ENST00000591622 PPP1R3GB7ZBB8 358 aa17.51■□□□□ 0.39
CIRBP-233ENST00000591622 BIN1O00499 593 aa17.51■□□□□ 0.39
CIRBP-233ENST00000591622 SLC16A3O15427 465 aaKnown RBP17.51■□□□□ 0.39
CIRBP-233ENST00000591622 HMGA1P17096 107 aaKnown RBP17.51■□□□□ 0.39
CIRBP-233ENST00000591622 PTPN1P18031 435 aaKnown RBP17.51■□□□□ 0.39
CIRBP-233ENST00000591622 FCARP24071 287 aa17.51■□□□□ 0.39
CIRBP-233ENST00000591622 GPC5P78333 572 aa17.51■□□□□ 0.39
CIRBP-233ENST00000591622 CYP27A1Q02318 531 aa17.51■□□□□ 0.39
CIRBP-233ENST00000591622 ZSCAN18Q8TBC5 510 aaPredicted RBP17.51■□□□□ 0.39
CIRBP-233ENST00000591622 TAS1R2Q8TE23 839 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms