RNA–Protein interactions for RNA: ENST00000589788.1

SDF2-208, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 1,342 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-208ENST00000589788 FEZF2Q8TBJ5 459 aa11.15□□□□□ -0.62
SDF2-208ENST00000589788 ZNF707Q96C28 371 aaPredicted RBP11.15□□□□□ -0.62
SDF2-208ENST00000589788 ACSF2Q96CM8 615 aaPredicted RBP11.15□□□□□ -0.62
SDF2-208ENST00000589788 FAM84AQ96KN4 292 aa11.15□□□□□ -0.62
SDF2-208ENST00000589788 CGRRF1Q99675 332 aa11.15□□□□□ -0.62
SDF2-208ENST00000589788 GTPBP4Q9BZE4 634 aaKnown RBP11.15□□□□□ -0.62
SDF2-208ENST00000589788 CYP4F11Q9HBI6 524 aa11.15□□□□□ -0.62
SDF2-208ENST00000589788 POLIQ9UNA4 740 aa11.15□□□□□ -0.62
SDF2-208ENST00000589788 FRMD4BQ9Y2L6 1034 aa11.15□□□□□ -0.62
SDF2-208ENST00000589788 DENND4AQ7Z401 1863 aa11.15□□□□□ -0.62
SDF2-208ENST00000589788 PTPRJQ12913 1337 aa11.15□□□□□ -0.62
SDF2-208ENST00000589788 TSC2P49815 1807 aa11.15□□□□□ -0.63
SDF2-208ENST00000589788 ERVH48-1M5A8F1 160 aa11.14□□□□□ -0.63
SDF2-208ENST00000589788 CCL16O15467 120 aa11.14□□□□□ -0.63
SDF2-208ENST00000589788 MBD3O95983 291 aa11.14□□□□□ -0.63
SDF2-208ENST00000589788 LRG1P02750 347 aa11.14□□□□□ -0.63
SDF2-208ENST00000589788 CYP11A1P05108 521 aa11.14□□□□□ -0.63
SDF2-208ENST00000589788 ALADP13716 330 aa11.14□□□□□ -0.63
SDF2-208ENST00000589788 RPL13P26373 211 aaKnown RBP11.14□□□□□ -0.63
SDF2-208ENST00000589788 ATP1A2P50993 1020 aa11.14□□□□□ -0.63
SDF2-208ENST00000589788 MYBPC2Q14324 1141 aa11.14□□□□□ -0.63
SDF2-208ENST00000589788 WSCD1Q658N2 575 aa11.14□□□□□ -0.63
SDF2-208ENST00000589788 CEP135Q66GS9 1140 aa11.14□□□□□ -0.63
SDF2-208ENST00000589788 OTOP3Q7RTS5 596 aa11.14□□□□□ -0.63
SDF2-208ENST00000589788 TCEAL8Q8IYN2 117 aa11.14□□□□□ -0.63
SDF2-208ENST00000589788 MFSD14AQ96MC6 490 aa11.14□□□□□ -0.63
SDF2-208ENST00000589788 WDR6Q9NNW5 1121 aaKnown RBP11.14□□□□□ -0.63
SDF2-208ENST00000589788 DMAC2Q9NW81 257 aa11.14□□□□□ -0.63
SDF2-208ENST00000589788 AFF4Q9UHB7 1163 aaKnown RBP11.14□□□□□ -0.63
SDF2-208ENST00000589788 SIX4Q9UIU6 781 aa11.14□□□□□ -0.63
SDF2-208ENST00000589788 MAFFQ9ULX9 164 aa11.14□□□□□ -0.63
SDF2-208ENST00000589788 TRAF3IP3Q9Y228 551 aa11.14□□□□□ -0.63
SDF2-208ENST00000589788 PCDHA5Q9Y5H7 936 aa11.14□□□□□ -0.63
SDF2-208ENST00000589788 CLUHO75153 1309 aa11.14□□□□□ -0.63
SDF2-208ENST00000589788 C2CD4DB7Z1M9 353 aa11.13□□□□□ -0.63
SDF2-208ENST00000589788 DCXO43602 365 aa11.13□□□□□ -0.63
SDF2-208ENST00000589788 HUS1O60921 280 aa11.13□□□□□ -0.63
SDF2-208ENST00000589788 PHACTR2O75167 634 aa11.13□□□□□ -0.63
SDF2-208ENST00000589788 CLSTN1O94985 981 aa11.13□□□□□ -0.63
SDF2-208ENST00000589788 PAPLNO95428 1278 aa11.13□□□□□ -0.63
SDF2-208ENST00000589788 OR4Q2P0C623 313 aa11.13□□□□□ -0.63
SDF2-208ENST00000589788 FSHRP23945 695 aa11.13□□□□□ -0.63
SDF2-208ENST00000589788 NR2F2P24468 414 aa11.13□□□□□ -0.63
SDF2-208ENST00000589788 ADCY1Q08828 1119 aa11.13□□□□□ -0.63
SDF2-208ENST00000589788 TRPC3Q13507 836 aa11.13□□□□□ -0.63
SDF2-208ENST00000589788 ZNF658Q5TYW1 1059 aaPredicted RBP11.13□□□□□ -0.63
SDF2-208ENST00000589788 TRAPPC11Q7Z392 1133 aa11.13□□□□□ -0.63
SDF2-208ENST00000589788 GRASPQ7Z6J2 395 aaPredicted RBP11.13□□□□□ -0.63
SDF2-208ENST00000589788 ELOA2Q8IYF1 753 aaPredicted RBP11.13□□□□□ -0.63
SDF2-208ENST00000589788 SMYD4Q8IYR2 804 aaPredicted RBP11.13□□□□□ -0.63
SDF2-208ENST00000589788 ELMOD1Q8N336 334 aa11.13□□□□□ -0.63
SDF2-208ENST00000589788 FAM200AQ8TCP9 573 aa11.13□□□□□ -0.63
SDF2-208ENST00000589788 TMEM174Q8WUU8 243 aa11.13□□□□□ -0.63
SDF2-208ENST00000589788 ERCC4Q92889 916 aaPredicted RBP11.13□□□□□ -0.63
SDF2-208ENST00000589788 BORCS6Q96GS4 357 aa11.13□□□□□ -0.63
SDF2-208ENST00000589788 HPDLQ96IR7 371 aa11.13□□□□□ -0.63
SDF2-208ENST00000589788 PGLYRP2Q96PD5 576 aa11.13□□□□□ -0.63
SDF2-208ENST00000589788 MUTYHQ9UIF7 546 aa11.13□□□□□ -0.63
SDF2-208ENST00000589788 SNX9Q9Y5X1 595 aa11.13□□□□□ -0.63
SDF2-208ENST00000589788 PI4K2BG5E9Z4 385 aa11.12□□□□□ -0.63
SDF2-208ENST00000589788 SEC24AO95486 1093 aa11.12□□□□□ -0.63
SDF2-208ENST00000589788 POU2F2P09086 479 aa11.12□□□□□ -0.63
SDF2-208ENST00000589788 GBP2P32456 591 aaPredicted RBP11.12□□□□□ -0.63
SDF2-208ENST00000589788 CASP4P49662 377 aa11.12□□□□□ -0.63
SDF2-208ENST00000589788 AP3M2P53677 418 aa11.12□□□□□ -0.63
SDF2-208ENST00000589788 GPR17Q13304 367 aa11.12□□□□□ -0.63
SDF2-208ENST00000589788 BIRC3Q13489 604 aa11.12□□□□□ -0.63
SDF2-208ENST00000589788 STIM1Q13586 685 aa11.12□□□□□ -0.63
SDF2-208ENST00000589788 NFIL3Q16649 462 aa11.12□□□□□ -0.63
SDF2-208ENST00000589788 SKOR2Q2VWA4 1001 aaPredicted RBP11.12□□□□□ -0.63
SDF2-208ENST00000589788 EDRF1Q3B7T1 1238 aa11.12□□□□□ -0.63
SDF2-208ENST00000589788 SLC39A12Q504Y0 691 aa11.12□□□□□ -0.63
SDF2-208ENST00000589788 GET4Q7L5D6 327 aaPredicted RBP11.12□□□□□ -0.63
SDF2-208ENST00000589788 ZDHHC14Q8IZN3 488 aa11.12□□□□□ -0.63
SDF2-208ENST00000589788 TMEM86AQ8N2M4 240 aa11.12□□□□□ -0.63
SDF2-208ENST00000589788 PDCL2Q8N4E4 241 aa11.12□□□□□ -0.63
SDF2-208ENST00000589788 CXorf38Q8TB03 319 aa11.12□□□□□ -0.63
SDF2-208ENST00000589788 SPATA20Q8TB22 786 aa11.12□□□□□ -0.63
SDF2-208ENST00000589788 PARD3BQ8TEW8 1205 aa11.12□□□□□ -0.63
SDF2-208ENST00000589788 TSG101Q99816 390 aa11.12□□□□□ -0.63
SDF2-208ENST00000589788 C1QTNF1Q9BXJ1 281 aa11.12□□□□□ -0.63
SDF2-208ENST00000589788 EPHX3Q9H6B9 360 aa11.12□□□□□ -0.63
SDF2-208ENST00000589788 GDAP2Q9NXN4 497 aa11.12□□□□□ -0.63
SDF2-208ENST00000589788 INSL5Q9Y5Q6 135 aa11.12□□□□□ -0.63
SDF2-208ENST00000589788 XIRP2A4UGR9 3374 aa11.12□□□□□ -0.63
SDF2-208ENST00000589788 MAPK13O15264 365 aa11.11□□□□□ -0.63
SDF2-208ENST00000589788 KRT13P13646 458 aa11.11□□□□□ -0.63
SDF2-208ENST00000589788 PTPN2P17706 415 aa11.11□□□□□ -0.63
SDF2-208ENST00000589788 PRCPP42785 496 aa11.11□□□□□ -0.63
SDF2-208ENST00000589788 NTHL1P78549 312 aa11.11□□□□□ -0.63
SDF2-208ENST00000589788 MYL7Q01449 175 aa11.11□□□□□ -0.63
SDF2-208ENST00000589788 TSPY1Q01534 308 aa11.11□□□□□ -0.63
SDF2-208ENST00000589788 TWF1Q12792 350 aa11.11□□□□□ -0.63
SDF2-208ENST00000589788 DUSP4Q13115 394 aa11.11□□□□□ -0.63
SDF2-208ENST00000589788 PLD1Q13393 1074 aa11.11□□□□□ -0.63
SDF2-208ENST00000589788 ADAM9Q13443 819 aa11.11□□□□□ -0.63
SDF2-208ENST00000589788 KLHL40Q2TBA0 621 aa11.11□□□□□ -0.63
SDF2-208ENST00000589788 PABPC1LQ4VXU2 614 aaKnown RBP11.11□□□□□ -0.63
SDF2-208ENST00000589788 SCARA3Q6AZY7 606 aa11.11□□□□□ -0.63
SDF2-208ENST00000589788 IQCEQ6IPM2 695 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms