RNA–Protein interactions for RNA: ENST00000588687.5

CCDC43-204, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 721 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-204ENST00000588687 SFR1Q86XK3 245 aa19.87■□□□□ 0.77
CCDC43-204ENST00000588687 ZSWIM2Q8NEG5 633 aa19.87■□□□□ 0.77
CCDC43-204ENST00000588687 LEO1Q8WVC0 666 aaPredicted RBP19.87■□□□□ 0.77
CCDC43-204ENST00000588687 ZHX3Q9H4I2 956 aa19.87■□□□□ 0.77
CCDC43-204ENST00000588687 GKN1Q9NS71 199 aa19.87■□□□□ 0.77
CCDC43-204ENST00000588687 CCDC163A0A0D9SF12 145 aa19.86■□□□□ 0.77
CCDC43-204ENST00000588687 TRDMT1O14717 391 aaKnown RBP19.86■□□□□ 0.77
CCDC43-204ENST00000588687 KRT18P05783 430 aaKnown RBP19.86■□□□□ 0.77
CCDC43-204ENST00000588687 RAP1GAPP47736 663 aa19.86■□□□□ 0.77
CCDC43-204ENST00000588687 RUNX3Q13761 415 aa19.86■□□□□ 0.77
CCDC43-204ENST00000588687 CCDC142Q17RM4 750 aa19.86■□□□□ 0.77
CCDC43-204ENST00000588687 SV2CQ496J9 727 aa19.86■□□□□ 0.77
CCDC43-204ENST00000588687 NAIF1Q69YI7 327 aaPredicted RBP19.86■□□□□ 0.77
CCDC43-204ENST00000588687 SLFN12LQ6IEE8 588 aa19.86■□□□□ 0.77
CCDC43-204ENST00000588687 METTL23Q86XA0 190 aa19.86■□□□□ 0.77
CCDC43-204ENST00000588687 THEM5Q8N1Q8 247 aa19.86■□□□□ 0.77
CCDC43-204ENST00000588687 MAB21L3Q8N8X9 362 aa19.86■□□□□ 0.77
CCDC43-204ENST00000588687 GAB3Q8WWW8 586 aa19.86■□□□□ 0.77
CCDC43-204ENST00000588687 HVCN1Q96D96 273 aa19.86■□□□□ 0.77
CCDC43-204ENST00000588687 EBF3Q9H4W6 596 aa19.86■□□□□ 0.77
CCDC43-204ENST00000588687 FBRSL1Q9HCM7 1045 aaKnown RBP19.86■□□□□ 0.77
CCDC43-204ENST00000588687 RXFP3Q9NSD7 469 aa19.86■□□□□ 0.77
CCDC43-204ENST00000588687 THG1LQ9NWX6 298 aaKnown RBP19.86■□□□□ 0.77
CCDC43-204ENST00000588687 EPN2O95208 641 aa19.85■□□□□ 0.77
CCDC43-204ENST00000588687 BMP15O95972 392 aa19.85■□□□□ 0.77
CCDC43-204ENST00000588687 ARSAP15289 507 aa19.85■□□□□ 0.77
CCDC43-204ENST00000588687 DDX6P26196 483 aaKnown RBP eCLIP19.85■□□□□ 0.77
CCDC43-204ENST00000588687 PXNP49023 591 aaPredicted RBP19.85■□□□□ 0.77
CCDC43-204ENST00000588687 SF3A1Q15459 793 aaKnown RBP19.85■□□□□ 0.77
CCDC43-204ENST00000588687 TXNDC8Q6A555 127 aa19.85■□□□□ 0.77
CCDC43-204ENST00000588687 NT5DC4Q86YG4 428 aa19.85■□□□□ 0.77
CCDC43-204ENST00000588687 PDCL2Q8N4E4 241 aa19.85■□□□□ 0.77
CCDC43-204ENST00000588687 C1orf127Q8N9H9 656 aa19.85■□□□□ 0.77
CCDC43-204ENST00000588687 EZH1Q92800 747 aaPredicted RBP19.85■□□□□ 0.77
CCDC43-204ENST00000588687 FAM84AQ96KN4 292 aa19.85■□□□□ 0.77
CCDC43-204ENST00000588687 KIF9Q9HAQ2 790 aa19.85■□□□□ 0.77
CCDC43-204ENST00000588687 TDP1Q9NUW8 608 aa19.85■□□□□ 0.77
CCDC43-204ENST00000588687 POLR3BQ9NW08 1133 aaPredicted RBP19.85■□□□□ 0.77
CCDC43-204ENST00000588687 L1RE1Q9UN81 338 aa19.85■□□□□ 0.77
CCDC43-204ENST00000588687 PCDHB5Q9Y5E4 795 aa19.85■□□□□ 0.77
CCDC43-204ENST00000588687 ZZEF1O43149 2961 aa19.85■□□□□ 0.77
CCDC43-204ENST00000588687 PTPRDP23468 1912 aa19.84■□□□□ 0.77
CCDC43-204ENST00000588687 SOBPA7XYQ1 873 aa19.84■□□□□ 0.77
CCDC43-204ENST00000588687 TM4SF5O14894 197 aa19.84■□□□□ 0.77
CCDC43-204ENST00000588687 FOXD2O60548 495 aaPredicted RBP19.84■□□□□ 0.77
CCDC43-204ENST00000588687 IL18RAPO95256 599 aa19.84■□□□□ 0.77
CCDC43-204ENST00000588687 EGFP01133 1207 aa19.84■□□□□ 0.77
CCDC43-204ENST00000588687 DDIT3P35638 169 aa19.84■□□□□ 0.77
CCDC43-204ENST00000588687 AVPR1AP37288 418 aa19.84■□□□□ 0.77
CCDC43-204ENST00000588687 LIMK1P53667 647 aa19.84■□□□□ 0.77
CCDC43-204ENST00000588687 ZNF268Q14587 947 aaPredicted RBP19.84■□□□□ 0.77
CCDC43-204ENST00000588687 SF3A2Q15428 464 aaKnown RBP19.84■□□□□ 0.77
CCDC43-204ENST00000588687 SDHAF4Q5VUM1 108 aa19.84■□□□□ 0.77
CCDC43-204ENST00000588687 CEP68Q76N32 757 aa19.84■□□□□ 0.77
CCDC43-204ENST00000588687 BRAPQ7Z569 592 aa19.84■□□□□ 0.77
CCDC43-204ENST00000588687 KBTBD6Q86V97 674 aa19.84■□□□□ 0.77
CCDC43-204ENST00000588687 BRSK2Q8IWQ3 736 aa19.84■□□□□ 0.77
CCDC43-204ENST00000588687 DCP1BQ8IZD4 617 aaKnown RBP19.84■□□□□ 0.77
CCDC43-204ENST00000588687 POMGNT1Q8WZA1 660 aa19.84■□□□□ 0.77
CCDC43-204ENST00000588687 DNAJC19Q96DA6 116 aa19.84■□□□□ 0.77
CCDC43-204ENST00000588687 EPSTI1Q96J88 318 aa19.84■□□□□ 0.77
CCDC43-204ENST00000588687 LOXL4Q96JB6 756 aa19.84■□□□□ 0.77
CCDC43-204ENST00000588687 ZNF560Q96MR9 790 aa19.84■□□□□ 0.77
CCDC43-204ENST00000588687 RNF40O75150 1001 aa19.83■□□□□ 0.77
CCDC43-204ENST00000588687 RPP40O75818 363 aaKnown RBP19.83■□□□□ 0.77
CCDC43-204ENST00000588687 NOL4O94818 638 aa19.83■□□□□ 0.77
CCDC43-204ENST00000588687 POLR2BP30876 1174 aaKnown RBP19.83■□□□□ 0.77
CCDC43-204ENST00000588687 CASP5P51878 434 aa19.83■□□□□ 0.77
CCDC43-204ENST00000588687 USP4Q13107 963 aa19.83■□□□□ 0.77
CCDC43-204ENST00000588687 PTPAQ15257 358 aa19.83■□□□□ 0.77
CCDC43-204ENST00000588687 ZNF77Q15935 545 aa19.83■□□□□ 0.77
CCDC43-204ENST00000588687 PLA2G2CQ5R387 149 aa19.83■□□□□ 0.77
CCDC43-204ENST00000588687 MON1AQ86VX9 555 aa19.83■□□□□ 0.77
CCDC43-204ENST00000588687 TRMT2BQ96GJ1 504 aaKnown RBP19.83■□□□□ 0.77
CCDC43-204ENST00000588687 MYRFLQ96LU7 910 aa19.83■□□□□ 0.77
CCDC43-204ENST00000588687 PI4K2AQ9BTU6 479 aa19.83■□□□□ 0.77
CCDC43-204ENST00000588687 FGFBP2Q9BYJ0 223 aa19.83■□□□□ 0.77
CCDC43-204ENST00000588687 ABCB6Q9NP58 842 aa19.83■□□□□ 0.77
CCDC43-204ENST00000588687 SPEGQ15772 3267 aa19.82■□□□□ 0.76
CCDC43-204ENST00000588687 MYMKA6NI61 221 aa19.82■□□□□ 0.76
CCDC43-204ENST00000588687 ITGB3P05106 788 aa19.82■□□□□ 0.76
CCDC43-204ENST00000588687 ZNF806P0C7X5 589 aa19.82■□□□□ 0.76
CCDC43-204ENST00000588687 PNPLA4P41247 253 aa19.82■□□□□ 0.76
CCDC43-204ENST00000588687 GRSF1Q12849 480 aaKnown RBP eCLIP19.82■□□□□ 0.76
CCDC43-204ENST00000588687 BFSP1Q12934 665 aa19.82■□□□□ 0.76
CCDC43-204ENST00000588687 CCDC6Q16204 474 aa19.82■□□□□ 0.76
CCDC43-204ENST00000588687 TAF12Q16514 161 aa19.82■□□□□ 0.76
CCDC43-204ENST00000588687 NFE2Q16621 373 aaPredicted RBP19.82■□□□□ 0.76
CCDC43-204ENST00000588687 INTS6LQ5JSJ4 861 aaKnown RBP19.82■□□□□ 0.76
CCDC43-204ENST00000588687 DYMQ7RTS9 669 aa19.82■□□□□ 0.76
CCDC43-204ENST00000588687 OSTM1Q86WC4 334 aa19.82■□□□□ 0.76
CCDC43-204ENST00000588687 KRI1Q8N9T8 703 aaKnown RBP19.82■□□□□ 0.76
CCDC43-204ENST00000588687 RASSF8Q8NHQ8 419 aa19.82■□□□□ 0.76
CCDC43-204ENST00000588687 SLC22A12Q96S37 553 aa19.82■□□□□ 0.76
CCDC43-204ENST00000588687 ACBD6Q9BR61 282 aa19.82■□□□□ 0.76
CCDC43-204ENST00000588687 ARRDC1-AS1Q9H2J1 176 aa19.82■□□□□ 0.76
CCDC43-204ENST00000588687 SEL1LQ9UBV2 794 aa19.82■□□□□ 0.76
CCDC43-204ENST00000588687 STK17AQ9UEE5 414 aa19.82■□□□□ 0.76
CCDC43-204ENST00000588687 SIX4Q9UIU6 781 aa19.82■□□□□ 0.76
CCDC43-204ENST00000588687 FBXO2Q9UK22 296 aaPredicted RBP19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms