RNA–Protein interactions for RNA: ENST00000588652.5

ERCC2-211, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, human

TSL 2

Gene ERCC2, Length 2,405 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ERCC2-211	ENST00000588652	GHR	P10912	638 aa		18.53	■□□□□ 0.56
ERCC2-211	ENST00000588652	RAP1GAP	P47736	663 aa		18.53	■□□□□ 0.56
ERCC2-211	ENST00000588652	LACTB	P83111	547 aa	Predicted RBP	18.53	■□□□□ 0.56
ERCC2-211	ENST00000588652	TNFAIP2	Q03169	654 aa		18.53	■□□□□ 0.56
ERCC2-211	ENST00000588652	PPP1R15B	Q5SWA1	713 aa		18.53	■□□□□ 0.56
ERCC2-211	ENST00000588652	JADE1	Q6IE81	842 aa		18.53	■□□□□ 0.56
ERCC2-211	ENST00000588652	PNMA8A	Q86V59	439 aa	Predicted RBP	18.53	■□□□□ 0.56
ERCC2-211	ENST00000588652	ERICH1	Q86X53	443 aa		18.53	■□□□□ 0.56
ERCC2-211	ENST00000588652	BRI3BP	Q8WY22	251 aa		18.53	■□□□□ 0.56
ERCC2-211	ENST00000588652	CPB2	Q96IY4	423 aa		18.53	■□□□□ 0.56
ERCC2-211	ENST00000588652	SERPINB12	Q96P63	405 aa		18.53	■□□□□ 0.56
ERCC2-211	ENST00000588652	HOMER3	Q9NSC5	361 aa		18.53	■□□□□ 0.56
ERCC2-211	ENST00000588652	MORF4L1	Q9UBU8	362 aa		18.53	■□□□□ 0.56
ERCC2-211	ENST00000588652	CEP83	Q9Y592	693 aa		18.53	■□□□□ 0.56
ERCC2-211	ENST00000588652	KAT6A	Q92794	2004 aa		18.53	■□□□□ 0.56
ERCC2-211	ENST00000588652		H3BRB1	525 aa		18.53	■□□□□ 0.56
ERCC2-211	ENST00000588652	ATF2	P15336	505 aa		18.53	■□□□□ 0.56
ERCC2-211	ENST00000588652	TCF4	P15884	667 aa		18.53	■□□□□ 0.56
ERCC2-211	ENST00000588652	ARF4	P18085	180 aa	Predicted RBP	18.53	■□□□□ 0.56
ERCC2-211	ENST00000588652	GTF2A1	P52655	376 aa	Predicted RBP	18.53	■□□□□ 0.56
ERCC2-211	ENST00000588652	GTF2A2	P52657	109 aa		18.53	■□□□□ 0.56
ERCC2-211	ENST00000588652	CAV1	Q03135	178 aa		18.53	■□□□□ 0.56
ERCC2-211	ENST00000588652	IPO4	Q8TEX9	1081 aa	Known RBP	18.53	■□□□□ 0.56
ERCC2-211	ENST00000588652	TUT1	Q9H6E5	874 aa	Known RBP	18.53	■□□□□ 0.56
ERCC2-211	ENST00000588652	NEU2	Q9Y3R4	380 aa		18.53	■□□□□ 0.56
ERCC2-211	ENST00000588652	PCNT	O95613	3336 aa		18.52	■□□□□ 0.56
ERCC2-211	ENST00000588652	TTC4	O95801	387 aa		18.52	■□□□□ 0.56
ERCC2-211	ENST00000588652	ITGB3	P05106	788 aa		18.52	■□□□□ 0.56
ERCC2-211	ENST00000588652	GCLC	P48506	637 aa	Predicted RBP	18.52	■□□□□ 0.56
ERCC2-211	ENST00000588652	IFNAR2	P48551	515 aa		18.52	■□□□□ 0.56
ERCC2-211	ENST00000588652	CDH8	P55286	799 aa		18.52	■□□□□ 0.56
ERCC2-211	ENST00000588652	OGDH	Q02218	1023 aa		18.52	■□□□□ 0.56
ERCC2-211	ENST00000588652	ITIH4	Q14624	930 aa		18.52	■□□□□ 0.56
ERCC2-211	ENST00000588652	CCNG2	Q16589	344 aa		18.52	■□□□□ 0.56
ERCC2-211	ENST00000588652	ATP13A4	Q4VNC1	1196 aa		18.52	■□□□□ 0.56
ERCC2-211	ENST00000588652	MAP1S	Q66K74	1059 aa	Predicted RBP	18.52	■□□□□ 0.56
ERCC2-211	ENST00000588652	DCUN1D2	Q6PH85	259 aa		18.52	■□□□□ 0.56
ERCC2-211	ENST00000588652	MTHFD1L	Q6UB35	978 aa		18.52	■□□□□ 0.56
ERCC2-211	ENST00000588652	ANKS4B	Q8N8V4	417 aa		18.52	■□□□□ 0.56
ERCC2-211	ENST00000588652	ATL2	Q8NHH9	583 aa		18.52	■□□□□ 0.56
ERCC2-211	ENST00000588652	CXorf38	Q8TB03	319 aa		18.52	■□□□□ 0.56
ERCC2-211	ENST00000588652	KLC4	Q9NSK0	619 aa		18.52	■□□□□ 0.56
ERCC2-211	ENST00000588652	DNAJC17	Q9NVM6	304 aa	Known RBP	18.52	■□□□□ 0.56
ERCC2-211	ENST00000588652	CLEC11A	Q9Y240	323 aa		18.52	■□□□□ 0.56
ERCC2-211	ENST00000588652	CCT8L1P	A6NM43	557 aa		18.52	■□□□□ 0.55
ERCC2-211	ENST00000588652		F8VP50	259 aa		18.52	■□□□□ 0.55
ERCC2-211	ENST00000588652	CD19	P15391	556 aa		18.52	■□□□□ 0.55
ERCC2-211	ENST00000588652	ATP5D	P30049	168 aa		18.52	■□□□□ 0.55
ERCC2-211	ENST00000588652	CYP4A22	Q5TCH4	519 aa		18.52	■□□□□ 0.55
ERCC2-211	ENST00000588652	DENND1B	Q6P3S1	775 aa		18.52	■□□□□ 0.55
ERCC2-211	ENST00000588652	FAXDC2	Q96IV6	333 aa		18.52	■□□□□ 0.55
ERCC2-211	ENST00000588652	SCLT1	Q96NL6	688 aa		18.52	■□□□□ 0.55
ERCC2-211	ENST00000588652	TRAIP	Q9BWF2	469 aa		18.52	■□□□□ 0.55
ERCC2-211	ENST00000588652	SDCBP2	Q9H190	292 aa		18.52	■□□□□ 0.55
ERCC2-211	ENST00000588652	ASB7	Q9H672	318 aa		18.52	■□□□□ 0.55
ERCC2-211	ENST00000588652	ATP2C2	O75185	946 aa		18.51	■□□□□ 0.55
ERCC2-211	ENST00000588652	MNAT1	P51948	309 aa		18.51	■□□□□ 0.55
ERCC2-211	ENST00000588652	RAD23B	P54727	409 aa		18.51	■□□□□ 0.55
ERCC2-211	ENST00000588652	TAP1	Q03518	808 aa		18.51	■□□□□ 0.55
ERCC2-211	ENST00000588652	NFX1	Q12986	1120 aa	Known RBP	18.51	■□□□□ 0.55
ERCC2-211	ENST00000588652	SLC10A6	Q3KNW5	377 aa		18.51	■□□□□ 0.55
ERCC2-211	ENST00000588652	SWT1	Q5T5J6	900 aa	Known RBP	18.51	■□□□□ 0.55
ERCC2-211	ENST00000588652	ARHGEF2	Q92974	986 aa	Known RBP	18.51	■□□□□ 0.55
ERCC2-211	ENST00000588652	LHX5	Q9H2C1	402 aa		18.51	■□□□□ 0.55
ERCC2-211	ENST00000588652	KLHL11	Q9NVR0	708 aa		18.51	■□□□□ 0.55
ERCC2-211	ENST00000588652	ANAPC5	Q9UJX4	755 aa		18.51	■□□□□ 0.55
ERCC2-211	ENST00000588652	VIM	P08670	466 aa	Known RBP	18.51	■□□□□ 0.55
ERCC2-211	ENST00000588652	ADCY8	P40145	1251 aa		18.51	■□□□□ 0.55
ERCC2-211	ENST00000588652	KYNU	Q16719	465 aa		18.51	■□□□□ 0.55
ERCC2-211	ENST00000588652	PTPN20	Q4JDL3	420 aa		18.51	■□□□□ 0.55
ERCC2-211	ENST00000588652	LRRC38	Q5VT99	294 aa		18.51	■□□□□ 0.55
ERCC2-211	ENST00000588652	GPR142	Q7Z601	462 aa		18.51	■□□□□ 0.55
ERCC2-211	ENST00000588652	DPP9	Q86TI2	863 aa		18.51	■□□□□ 0.55
ERCC2-211	ENST00000588652	FAM118B	Q9BPY3	351 aa		18.51	■□□□□ 0.55
ERCC2-211	ENST00000588652	HAUS2	Q9NVX0	235 aa		18.51	■□□□□ 0.55
ERCC2-211	ENST00000588652	NINJ2	Q9NZG7	142 aa		18.51	■□□□□ 0.55
ERCC2-211	ENST00000588652	SAMD15	Q9P1V8	674 aa		18.51	■□□□□ 0.55
ERCC2-211	ENST00000588652	CTNNAL1	Q9UBT7	734 aa		18.51	■□□□□ 0.55
ERCC2-211	ENST00000588652	CIT	O14578	2027 aa		18.51	■□□□□ 0.55
ERCC2-211	ENST00000588652	MED7	O43513	233 aa		18.5	■□□□□ 0.55
ERCC2-211	ENST00000588652	CREB1	P16220	341 aa		18.5	■□□□□ 0.55
ERCC2-211	ENST00000588652	CETN2	P41208	172 aa		18.5	■□□□□ 0.55
ERCC2-211	ENST00000588652	VPS41	P49754	854 aa		18.5	■□□□□ 0.55
ERCC2-211	ENST00000588652	PIGH	Q14442	188 aa	Predicted RBP	18.5	■□□□□ 0.55
ERCC2-211	ENST00000588652	VSTM1	Q6UX27	236 aa		18.5	■□□□□ 0.55
ERCC2-211	ENST00000588652	ANKRD23	Q86SG2	305 aa		18.5	■□□□□ 0.55
ERCC2-211	ENST00000588652	RCOR2	Q8IZ40	523 aa		18.5	■□□□□ 0.55
ERCC2-211	ENST00000588652	BBOF1	Q8ND07	529 aa		18.5	■□□□□ 0.55
ERCC2-211	ENST00000588652	NLRP7	Q8WX94	980 aa		18.5	■□□□□ 0.55
ERCC2-211	ENST00000588652	RBM41	Q96IZ5	413 aa	Known RBP	18.5	■□□□□ 0.55
ERCC2-211	ENST00000588652	PWWP2A	Q96N64	755 aa		18.5	■□□□□ 0.55
ERCC2-211	ENST00000588652	ELAC2	Q9BQ52	826 aa	Known RBP	18.5	■□□□□ 0.55
ERCC2-211	ENST00000588652	NSRP1	Q9H0G5	558 aa	Known RBP	18.5	■□□□□ 0.55
ERCC2-211	ENST00000588652	SMYD3	Q9H7B4	428 aa		18.5	■□□□□ 0.55
ERCC2-211	ENST00000588652	CYTH4	Q9UIA0	394 aa		18.5	■□□□□ 0.55
ERCC2-211	ENST00000588652	STRIP2	Q9ULQ0	834 aa		18.5	■□□□□ 0.55
ERCC2-211	ENST00000588652	PI4K2B	G5E9Z4	385 aa		18.5	■□□□□ 0.55
ERCC2-211	ENST00000588652	SMPD1	P17405	629 aa		18.5	■□□□□ 0.55
ERCC2-211	ENST00000588652	SF3A3	Q12874	501 aa	Known RBP eCLIP	18.5	■□□□□ 0.55
ERCC2-211	ENST00000588652	DUSP28	Q4G0W2	176 aa		18.5	■□□□□ 0.55

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