RNA–Protein interactions for RNA: ENST00000588477.5

IFT20-216, Transcript of intraflagellar transport 20, humanhuman

TSL 5 BASIC

Gene IFT20, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-216ENST00000588477 WASF3Q9UPY6 502 aa16.53■□□□□ 0.24
IFT20-216ENST00000588477 MYOFQ9NZM1 2061 aa16.52■□□□□ 0.24
IFT20-216ENST00000588477 NPHP3-ACAD11A0A0J9YXS1 232 aa16.52■□□□□ 0.24
IFT20-216ENST00000588477 PIRO00625 290 aa16.52■□□□□ 0.24
IFT20-216ENST00000588477 FAM189A1O60320 539 aa16.52■□□□□ 0.24
IFT20-216ENST00000588477 APBB3O95704 486 aa16.52■□□□□ 0.24
IFT20-216ENST00000588477 ADRB2P07550 413 aa16.52■□□□□ 0.24
IFT20-216ENST00000588477 HAPLN1P10915 354 aaPredicted RBP16.52■□□□□ 0.24
IFT20-216ENST00000588477 PAX3P23760 479 aa16.52■□□□□ 0.24
IFT20-216ENST00000588477 DDX6P26196 483 aaKnown RBP eCLIP16.52■□□□□ 0.24
IFT20-216ENST00000588477 NCKAP1LP55160 1127 aa16.52■□□□□ 0.24
IFT20-216ENST00000588477 DTHD1Q6ZMT9 781 aa16.52■□□□□ 0.24
IFT20-216ENST00000588477 METTL23Q86XA0 190 aa16.52■□□□□ 0.24
IFT20-216ENST00000588477 THEM5Q8N1Q8 247 aa16.52■□□□□ 0.24
IFT20-216ENST00000588477 STKLD1Q8NE28 680 aa16.52■□□□□ 0.24
IFT20-216ENST00000588477 C2orf15Q8WU43 125 aaKnown RBP16.52■□□□□ 0.24
IFT20-216ENST00000588477 EZH1Q92800 747 aaPredicted RBP16.52■□□□□ 0.24
IFT20-216ENST00000588477 PLIN2Q99541 437 aa16.52■□□□□ 0.24
IFT20-216ENST00000588477 ADAM33Q9BZ11 813 aa16.52■□□□□ 0.24
IFT20-216ENST00000588477 ABI2Q9NYB9 513 aaPredicted RBP16.52■□□□□ 0.24
IFT20-216ENST00000588477 LARSQ9P2J5 1176 aaKnown RBP16.52■□□□□ 0.24
IFT20-216ENST00000588477 EBF1Q9UH73 591 aa16.52■□□□□ 0.24
IFT20-216ENST00000588477 DSEQ9UL01 958 aa16.52■□□□□ 0.24
IFT20-216ENST00000588477 TBX20Q9UMR3 447 aa16.52■□□□□ 0.24
IFT20-216ENST00000588477 MAGED2Q9UNF1 606 aaPredicted RBP16.52■□□□□ 0.24
IFT20-216ENST00000588477 PCNX2A6NKB5 2137 aa16.52■□□□□ 0.23
IFT20-216ENST00000588477 ATRXP46100 2492 aa16.51■□□□□ 0.23
IFT20-216ENST00000588477 ANO9A1A5B4 782 aa16.51■□□□□ 0.23
IFT20-216ENST00000588477 H0YCG3 227 aa16.51■□□□□ 0.23
IFT20-216ENST00000588477 CYB561D2O14569 222 aa16.51■□□□□ 0.23
IFT20-216ENST00000588477 HNRNPDLO14979 420 aaKnown RBP16.51■□□□□ 0.23
IFT20-216ENST00000588477 NFICP08651 508 aa16.51■□□□□ 0.23
IFT20-216ENST00000588477 HMGA1P17096 107 aaKnown RBP16.51■□□□□ 0.23
IFT20-216ENST00000588477 CD302Q8IX05 232 aa16.51■□□□□ 0.23
IFT20-216ENST00000588477 TTC16Q8NEE8 873 aa16.51■□□□□ 0.23
IFT20-216ENST00000588477 MRPS31Q92665 395 aaKnown RBP16.51■□□□□ 0.23
IFT20-216ENST00000588477 CD101Q93033 1021 aa16.51■□□□□ 0.23
IFT20-216ENST00000588477 EXOC4Q96A65 974 aa16.51■□□□□ 0.23
IFT20-216ENST00000588477 PNMA5Q96PV4 448 aa16.51■□□□□ 0.23
IFT20-216ENST00000588477 PYM1Q9BRP8 204 aaKnown RBP16.51■□□□□ 0.23
IFT20-216ENST00000588477 TMEM121BQ9BXQ6 578 aaPredicted RBP16.51■□□□□ 0.23
IFT20-216ENST00000588477 TPSD1Q9BZJ3 242 aa16.51■□□□□ 0.23
IFT20-216ENST00000588477 ECT2Q9H8V3 914 aa16.51■□□□□ 0.23
IFT20-216ENST00000588477 TMEM9BQ9NQ34 198 aa16.51■□□□□ 0.23
IFT20-216ENST00000588477 PATE3B3GLJ2 98 aa16.5■□□□□ 0.23
IFT20-216ENST00000588477 LAD1O00515 517 aa16.5■□□□□ 0.23
IFT20-216ENST00000588477 KHNYNO15037 678 aaKnown RBP16.5■□□□□ 0.23
IFT20-216ENST00000588477 CEACAM1P13688 526 aa16.5■□□□□ 0.23
IFT20-216ENST00000588477 PRPHP41219 470 aa16.5■□□□□ 0.23
IFT20-216ENST00000588477 GPR15P49685 360 aa16.5■□□□□ 0.23
IFT20-216ENST00000588477 SLC12A3P55017 1021 aa16.5■□□□□ 0.23
IFT20-216ENST00000588477 SMARCB1Q12824 385 aa16.5■□□□□ 0.23
IFT20-216ENST00000588477 TMEM132DQ14C87 1099 aa16.5■□□□□ 0.23
IFT20-216ENST00000588477 PDGFRLQ15198 375 aa16.5■□□□□ 0.23
IFT20-216ENST00000588477 CPA6Q8N4T0 437 aa16.5■□□□□ 0.23
IFT20-216ENST00000588477 ACDQ96AP0 544 aa16.5■□□□□ 0.23
IFT20-216ENST00000588477 MSTO1Q9BUK6 570 aa16.5■□□□□ 0.23
IFT20-216ENST00000588477 SCNM1Q9BWG6 230 aa16.5■□□□□ 0.23
IFT20-216ENST00000588477 CPSF3Q9UKF6 684 aaKnown RBP16.5■□□□□ 0.23
IFT20-216ENST00000588477 PLXND1Q9Y4D7 1925 aa16.49■□□□□ 0.23
IFT20-216ENST00000588477 CDX4O14627 284 aaPredicted RBP16.49■□□□□ 0.23
IFT20-216ENST00000588477 PLA2G4BP0C869 781 aa16.49■□□□□ 0.23
IFT20-216ENST00000588477 TAF6P49848 677 aa16.49■□□□□ 0.23
IFT20-216ENST00000588477 ZNF268Q14587 947 aaPredicted RBP16.49■□□□□ 0.23
IFT20-216ENST00000588477 MTF1Q14872 753 aa16.49■□□□□ 0.23
IFT20-216ENST00000588477 USP39Q53GS9 565 aaKnown RBP16.49■□□□□ 0.23
IFT20-216ENST00000588477 ARSHQ5FYA8 562 aa16.49■□□□□ 0.23
IFT20-216ENST00000588477 HYIQ5T013 277 aa16.49■□□□□ 0.23
IFT20-216ENST00000588477 SDHAF4Q5VUM1 108 aa16.49■□□□□ 0.23
IFT20-216ENST00000588477 WSCD1Q658N2 575 aa16.49■□□□□ 0.23
IFT20-216ENST00000588477 PMS2CLQ68D20 193 aa16.49■□□□□ 0.23
IFT20-216ENST00000588477 MON1AQ86VX9 555 aa16.49■□□□□ 0.23
IFT20-216ENST00000588477 DCP1BQ8IZD4 617 aaKnown RBP16.49■□□□□ 0.23
IFT20-216ENST00000588477 FAM184AQ8NB25 1140 aa16.49■□□□□ 0.23
IFT20-216ENST00000588477 TSTD1Q8NFU3 115 aa16.49■□□□□ 0.23
IFT20-216ENST00000588477 LLPHQ9BRT6 129 aaKnown RBP16.49■□□□□ 0.23
IFT20-216ENST00000588477 PI4K2AQ9BTU6 479 aa16.49■□□□□ 0.23
IFT20-216ENST00000588477 TMLHEQ9NVH6 421 aa16.49■□□□□ 0.23
IFT20-216ENST00000588477 DUS2Q9NX74 493 aaKnown RBP16.49■□□□□ 0.23
IFT20-216ENST00000588477 KCND2Q9NZV8 630 aa16.49■□□□□ 0.23
IFT20-216ENST00000588477 PCDHB5Q9Y5E4 795 aa16.49■□□□□ 0.23
IFT20-216ENST00000588477 MYO18AQ92614 2054 aaKnown RBP16.49■□□□□ 0.23
IFT20-216ENST00000588477 A0A0B4J269 797 aa16.48■□□□□ 0.23
IFT20-216ENST00000588477 TMEM8BA6NDV4 472 aa16.48■□□□□ 0.23
IFT20-216ENST00000588477 SRRM3A6NNA2 597 aaPredicted RBP16.48■□□□□ 0.23
IFT20-216ENST00000588477 SOBPA7XYQ1 873 aa16.48■□□□□ 0.23
IFT20-216ENST00000588477 PRPF40AO75400 957 aaKnown RBP16.48■□□□□ 0.23
IFT20-216ENST00000588477 PIGRP01833 764 aa16.48■□□□□ 0.23
IFT20-216ENST00000588477 CSH1P0DML2 217 aa16.48■□□□□ 0.23
IFT20-216ENST00000588477 CSH2P0DML3 217 aa16.48■□□□□ 0.23
IFT20-216ENST00000588477 CSRP1P21291 193 aaKnown RBP16.48■□□□□ 0.23
IFT20-216ENST00000588477 ACOT2P49753 483 aa16.48■□□□□ 0.23
IFT20-216ENST00000588477 IRX4P78413 519 aa16.48■□□□□ 0.23
IFT20-216ENST00000588477 UAP1L1Q3KQV9 507 aa16.48■□□□□ 0.23
IFT20-216ENST00000588477 OSCP1Q8WVF1 389 aa16.48■□□□□ 0.23
IFT20-216ENST00000588477 GATA6Q92908 595 aa16.48■□□□□ 0.23
IFT20-216ENST00000588477 CYP2S1Q96SQ9 504 aa16.48■□□□□ 0.23
IFT20-216ENST00000588477 TRPC7Q9HCX4 862 aa16.48■□□□□ 0.23
IFT20-216ENST00000588477 DPP3Q9NY33 737 aa16.48■□□□□ 0.23
IFT20-216ENST00000588477 LIMCH1Q9UPQ0 1083 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms