RNA–Protein interactions for RNA: ENST00000588344.2

CIRBP-218, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 370 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-218ENST00000588344 CDH23Q9H251 3354 aa9.66□□□□□ -0.86
CIRBP-218ENST00000588344 CITO14578 2027 aa9.66□□□□□ -0.86
CIRBP-218ENST00000588344 MYBPHLA2RUH7 354 aa9.65□□□□□ -0.86
CIRBP-218ENST00000588344 ADAM12O43184 909 aa9.65□□□□□ -0.86
CIRBP-218ENST00000588344 XYLBO75191 536 aa9.65□□□□□ -0.86
CIRBP-218ENST00000588344 LRRN2O75325 713 aa9.65□□□□□ -0.86
CIRBP-218ENST00000588344 ZMYND10O75800 440 aa9.65□□□□□ -0.86
CIRBP-218ENST00000588344 CCDC172P0C7W6 258 aa9.65□□□□□ -0.86
CIRBP-218ENST00000588344 VDRP11473 427 aa9.65□□□□□ -0.86
CIRBP-218ENST00000588344 UCHL3P15374 230 aa9.65□□□□□ -0.86
CIRBP-218ENST00000588344 CD58P19256 250 aa9.65□□□□□ -0.86
CIRBP-218ENST00000588344 ACAT1P24752 427 aaKnown RBP9.65□□□□□ -0.86
CIRBP-218ENST00000588344 MAGEA11P43364 429 aa9.65□□□□□ -0.86
CIRBP-218ENST00000588344 ALDH1A3P47895 512 aa9.65□□□□□ -0.86
CIRBP-218ENST00000588344 EPHB3P54753 998 aa9.65□□□□□ -0.86
CIRBP-218ENST00000588344 SLC8A3P57103 927 aa9.65□□□□□ -0.86
CIRBP-218ENST00000588344 SYCP1Q15431 976 aa9.65□□□□□ -0.86
CIRBP-218ENST00000588344 CCDC85BQ15834 202 aaPredicted RBP9.65□□□□□ -0.86
CIRBP-218ENST00000588344 PPM1LQ5SGD2 360 aa9.65□□□□□ -0.86
CIRBP-218ENST00000588344 ANKRD54Q6NXT1 300 aa9.65□□□□□ -0.86
CIRBP-218ENST00000588344 RNF19BQ6ZMZ0 732 aa9.65□□□□□ -0.86
CIRBP-218ENST00000588344 RRAGAQ7L523 313 aa9.65□□□□□ -0.86
CIRBP-218ENST00000588344 LRRTM3Q86VH5 581 aa9.65□□□□□ -0.86
CIRBP-218ENST00000588344 OSTM1Q86WC4 334 aa9.65□□□□□ -0.86
CIRBP-218ENST00000588344 GLYCTKQ8IVS8 523 aa9.65□□□□□ -0.86
CIRBP-218ENST00000588344 ELMOD1Q8N336 334 aa9.65□□□□□ -0.86
CIRBP-218ENST00000588344 CYFIP2Q96F07 1278 aa9.65□□□□□ -0.86
CIRBP-218ENST00000588344 STK33Q9BYT3 514 aa9.65□□□□□ -0.86
CIRBP-218ENST00000588344 ELOVL4Q9GZR5 314 aa9.65□□□□□ -0.86
CIRBP-218ENST00000588344 SDCBP2Q9H190 292 aa9.65□□□□□ -0.86
CIRBP-218ENST00000588344 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.65□□□□□ -0.865e-7■■■■■ 31.2
CIRBP-218ENST00000588344 MAN1C1Q9NR34 630 aa9.65□□□□□ -0.86
CIRBP-218ENST00000588344 CEP72Q9P209 647 aa9.65□□□□□ -0.86
CIRBP-218ENST00000588344 DNAJC12Q9UKB3 198 aa9.65□□□□□ -0.86
CIRBP-218ENST00000588344 SIK3Q9Y2K2 1263 aa9.65□□□□□ -0.86
CIRBP-218ENST00000588344 PCDHB4Q9Y5E5 795 aa9.65□□□□□ -0.86
CIRBP-218ENST00000588344 CCDC195A0A1B0GUA6 201 aa9.64□□□□□ -0.87
CIRBP-218ENST00000588344 MTMR11A4FU01 709 aa9.64□□□□□ -0.87
CIRBP-218ENST00000588344 TRIM66O15016 1216 aa9.64□□□□□ -0.87
CIRBP-218ENST00000588344 MED7O43513 233 aa9.64□□□□□ -0.87
CIRBP-218ENST00000588344 FGF19O95750 216 aa9.64□□□□□ -0.87
CIRBP-218ENST00000588344 LRG1P02750 347 aa9.64□□□□□ -0.87
CIRBP-218ENST00000588344 C8AP07357 584 aa9.64□□□□□ -0.87
CIRBP-218ENST00000588344 EPCAMP16422 314 aa9.64□□□□□ -0.87
CIRBP-218ENST00000588344 ACO1P21399 889 aaKnown RBP9.64□□□□□ -0.87
CIRBP-218ENST00000588344 GTF2F1P35269 517 aaKnown RBP eCLIP9.64□□□□□ -0.87
CIRBP-218ENST00000588344 RAP1GAPP47736 663 aa9.64□□□□□ -0.87
CIRBP-218ENST00000588344 RAD23BP54727 409 aa9.64□□□□□ -0.87
CIRBP-218ENST00000588344 CYP27A1Q02318 531 aa9.64□□□□□ -0.87
CIRBP-218ENST00000588344 DUSP4Q13115 394 aa9.64□□□□□ -0.87
CIRBP-218ENST00000588344 VEPH1Q14D04 833 aa9.64□□□□□ -0.87
CIRBP-218ENST00000588344 FIGNQ5HY92 759 aa9.64□□□□□ -0.87
CIRBP-218ENST00000588344 MDH1BQ5I0G3 518 aa9.64□□□□□ -0.87
CIRBP-218ENST00000588344 ATAT1Q5SQI0 421 aa9.64□□□□□ -0.87
CIRBP-218ENST00000588344 ARHGAP17Q68EM7 881 aa9.64□□□□□ -0.87
CIRBP-218ENST00000588344 IQCEQ6IPM2 695 aa9.64□□□□□ -0.87
CIRBP-218ENST00000588344 LLGL2Q6P1M3 1020 aa9.64□□□□□ -0.87
CIRBP-218ENST00000588344 TMEM270Q6UE05 265 aa9.64□□□□□ -0.87
CIRBP-218ENST00000588344 EP400NLQ6ZTU2 488 aa9.64□□□□□ -0.87
CIRBP-218ENST00000588344 ACOT1Q86TX2 421 aa9.64□□□□□ -0.87
CIRBP-218ENST00000588344 ITIH5Q86UX2 942 aa9.64□□□□□ -0.87
CIRBP-218ENST00000588344 ARHGEF19Q8IW93 802 aa9.64□□□□□ -0.87
CIRBP-218ENST00000588344 UBR7Q8N806 425 aa9.64□□□□□ -0.87
CIRBP-218ENST00000588344 ATAD1Q8NBU5 361 aa9.64□□□□□ -0.87
CIRBP-218ENST00000588344 LEMD2Q8NC56 503 aa9.64□□□□□ -0.87
CIRBP-218ENST00000588344 RNF214Q8ND24 703 aa9.64□□□□□ -0.87
CIRBP-218ENST00000588344 ZNF397Q8NF99 534 aaPredicted RBP9.64□□□□□ -0.87
CIRBP-218ENST00000588344 VN1R2Q8NFZ6 395 aa9.64□□□□□ -0.87
CIRBP-218ENST00000588344 WHAMMQ8TF30 809 aa9.64□□□□□ -0.87
CIRBP-218ENST00000588344 PPM1EQ8WY54 764 aa9.64□□□□□ -0.87
CIRBP-218ENST00000588344 SHC3Q92529 594 aa9.64□□□□□ -0.87
CIRBP-218ENST00000588344 ZNF512Q96ME7 567 aaPredicted RBP9.64□□□□□ -0.87
CIRBP-218ENST00000588344 RIPOR3Q96MK2 946 aa9.64□□□□□ -0.87
CIRBP-218ENST00000588344 KREMEN1Q96MU8 473 aa9.64□□□□□ -0.87
CIRBP-218ENST00000588344 NAP1L5Q96NT1 182 aaPredicted RBP9.64□□□□□ -0.87
CIRBP-218ENST00000588344 NECTIN4Q96NY8 510 aa9.64□□□□□ -0.87
CIRBP-218ENST00000588344 PGLYRP2Q96PD5 576 aa9.64□□□□□ -0.87
CIRBP-218ENST00000588344 TMEM209Q96SK2 561 aa9.64□□□□□ -0.87
CIRBP-218ENST00000588344 HNRNPABQ99729 332 aaKnown RBP9.64□□□□□ -0.87
CIRBP-218ENST00000588344 LSM14BQ9BX40 385 aaKnown RBP9.64□□□□□ -0.87
CIRBP-218ENST00000588344 PRKD2Q9BZL6 878 aa9.64□□□□□ -0.87
CIRBP-218ENST00000588344 UBXN6Q9BZV1 441 aa9.64□□□□□ -0.87
CIRBP-218ENST00000588344 NUCKS1Q9H1E3 243 aaKnown RBP9.64□□□□□ -0.87
CIRBP-218ENST00000588344 ADAM7Q9H2U9 754 aa9.64□□□□□ -0.87
CIRBP-218ENST00000588344 UBE2ZQ9H832 354 aaPredicted RBP9.64□□□□□ -0.87
CIRBP-218ENST00000588344 SIX2Q9NPC8 291 aa9.64□□□□□ -0.87
CIRBP-218ENST00000588344 CRTAC1Q9NQ79 661 aa9.64□□□□□ -0.87
CIRBP-218ENST00000588344 ABI2Q9NYB9 513 aaPredicted RBP9.64□□□□□ -0.87
CIRBP-218ENST00000588344 MYO6Q9UM54 1294 aa9.64□□□□□ -0.87
CIRBP-218ENST00000588344 TDRD15B5MCY1 1934 aaKnown RBP9.64□□□□□ -0.87
CIRBP-218ENST00000588344 ZNF197O14709 1029 aa9.63□□□□□ -0.87
CIRBP-218ENST00000588344 TEX33O43247 280 aa9.63□□□□□ -0.87
CIRBP-218ENST00000588344 ATP2C2O75185 946 aa9.63□□□□□ -0.87
CIRBP-218ENST00000588344 GLP2RO95838 553 aa9.63□□□□□ -0.87
CIRBP-218ENST00000588344 OR4Q2P0C623 313 aa9.63□□□□□ -0.87
CIRBP-218ENST00000588344 SPATA31D3P0C874 917 aa9.63□□□□□ -0.87
CIRBP-218ENST00000588344 HAPLN1P10915 354 aaPredicted RBP9.63□□□□□ -0.87
CIRBP-218ENST00000588344 KRT5P13647 590 aa9.63□□□□□ -0.87
CIRBP-218ENST00000588344 ANXA13P27216 316 aa9.63□□□□□ -0.87
CIRBP-218ENST00000588344 MTHFRP42898 656 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms