RNA–Protein interactions for RNA: ENST00000588300.1

ERCC1-206, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 2

Gene ERCC1, Length 1,055 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-206ENST00000588300 PRPF40AO75400 957 aaKnown RBP17.13■□□□□ 0.33
ERCC1-206ENST00000588300 CSH1P0DML2 217 aa17.13■□□□□ 0.33
ERCC1-206ENST00000588300 CSH2P0DML3 217 aa17.13■□□□□ 0.33
ERCC1-206ENST00000588300 HMGA1P17096 107 aaKnown RBP17.13■□□□□ 0.33
ERCC1-206ENST00000588300 NLRP12P59046 1061 aa17.13■□□□□ 0.33
ERCC1-206ENST00000588300 MYL7Q01449 175 aa17.13■□□□□ 0.33
ERCC1-206ENST00000588300 TNK2Q07912 1038 aa17.13■□□□□ 0.33
ERCC1-206ENST00000588300 BFSP1Q12934 665 aa17.13■□□□□ 0.33
ERCC1-206ENST00000588300 CCINQ13939 588 aa17.13■□□□□ 0.33
ERCC1-206ENST00000588300 LPAL2Q16609 132 aa17.13■□□□□ 0.33
ERCC1-206ENST00000588300 WDR44Q5JSH3 913 aa17.13■□□□□ 0.33
ERCC1-206ENST00000588300 PRR23BQ6ZRT6 265 aa17.13■□□□□ 0.33
ERCC1-206ENST00000588300 TMEM86AQ8N2M4 240 aa17.13■□□□□ 0.33
ERCC1-206ENST00000588300 SYNPOQ8N3V7 929 aa17.13■□□□□ 0.33
ERCC1-206ENST00000588300 MAB21L3Q8N8X9 362 aa17.13■□□□□ 0.33
ERCC1-206ENST00000588300 NOC3LQ8WTT2 800 aaKnown RBP17.13■□□□□ 0.33
ERCC1-206ENST00000588300 ACBD6Q9BR61 282 aa17.13■□□□□ 0.33
ERCC1-206ENST00000588300 PI4K2AQ9BTU6 479 aa17.13■□□□□ 0.33
ERCC1-206ENST00000588300 TMEM206Q9H813 350 aa17.13■□□□□ 0.33
ERCC1-206ENST00000588300 KIF9Q9HAQ2 790 aa17.13■□□□□ 0.33
ERCC1-206ENST00000588300 PANK4Q9NVE7 773 aa17.13■□□□□ 0.33
ERCC1-206ENST00000588300 TMLHEQ9NVH6 421 aa17.13■□□□□ 0.33
ERCC1-206ENST00000588300 DDX43Q9NXZ2 648 aaKnown RBP17.13■□□□□ 0.33
ERCC1-206ENST00000588300 L1RE1Q9UN81 338 aa17.13■□□□□ 0.33
ERCC1-206ENST00000588300 GOLGA8IPA6NC78 632 aa17.12■□□□□ 0.33
ERCC1-206ENST00000588300 GOLGA8JA6NMD2 632 aa17.12■□□□□ 0.33
ERCC1-206ENST00000588300 SOBPA7XYQ1 873 aa17.12■□□□□ 0.33
ERCC1-206ENST00000588300 CHURC1-FNTBB4DL54 471 aa17.12■□□□□ 0.33
ERCC1-206ENST00000588300 F11P03951 625 aa17.12■□□□□ 0.33
ERCC1-206ENST00000588300 KRT19P08727 400 aa17.12■□□□□ 0.33
ERCC1-206ENST00000588300 TMEM191BP0C7N4 346 aa17.12■□□□□ 0.33
ERCC1-206ENST00000588300 CNR2P34972 360 aa17.12■□□□□ 0.33
ERCC1-206ENST00000588300 FNTBP49356 437 aa17.12■□□□□ 0.33
ERCC1-206ENST00000588300 SLC39A14Q15043 492 aa17.12■□□□□ 0.33
ERCC1-206ENST00000588300 INTS6LQ5JSJ4 861 aaKnown RBP17.12■□□□□ 0.33
ERCC1-206ENST00000588300 TMEM150AQ86TG1 271 aa17.12■□□□□ 0.33
ERCC1-206ENST00000588300 LONP2Q86WA8 852 aa17.12■□□□□ 0.33
ERCC1-206ENST00000588300 CSGALNACT2Q8N6G5 542 aa17.12■□□□□ 0.33
ERCC1-206ENST00000588300 SPATA18Q8TC71 538 aa17.12■□□□□ 0.33
ERCC1-206ENST00000588300 MRPS31Q92665 395 aaKnown RBP17.12■□□□□ 0.33
ERCC1-206ENST00000588300 USP28Q96RU2 1077 aa17.12■□□□□ 0.33
ERCC1-206ENST00000588300 CBWD1Q9BRT8 395 aa17.12■□□□□ 0.33
ERCC1-206ENST00000588300 FGFBP2Q9BYJ0 223 aa17.12■□□□□ 0.33
ERCC1-206ENST00000588300 PANK2Q9BZ23 570 aa17.12■□□□□ 0.33
ERCC1-206ENST00000588300 PCIF1Q9H4Z3 704 aa17.12■□□□□ 0.33
ERCC1-206ENST00000588300 ABCB6Q9NP58 842 aa17.12■□□□□ 0.33
ERCC1-206ENST00000588300 UXTQ9UBK9 157 aaPredicted RBP17.12■□□□□ 0.33
ERCC1-206ENST00000588300 CDV3Q9UKY7 258 aaKnown RBP17.12■□□□□ 0.33
ERCC1-206ENST00000588300 MAGED2Q9UNF1 606 aaPredicted RBP17.12■□□□□ 0.33
ERCC1-206ENST00000588300 A0A087X0B3 334 aa17.11■□□□□ 0.33
ERCC1-206ENST00000588300 K7ESF4 209 aa17.11■□□□□ 0.33
ERCC1-206ENST00000588300 KIAA0391O15091 583 aaKnown RBP17.11■□□□□ 0.33
ERCC1-206ENST00000588300 RETP07949 1114 aa17.11■□□□□ 0.33
ERCC1-206ENST00000588300 TGM1P22735 817 aa17.11■□□□□ 0.33
ERCC1-206ENST00000588300 GPR15P49685 360 aa17.11■□□□□ 0.33
ERCC1-206ENST00000588300 RPL10AP62906 217 aaKnown RBP17.11■□□□□ 0.33
ERCC1-206ENST00000588300 RBP5P82980 135 aa17.11■□□□□ 0.33
ERCC1-206ENST00000588300 DMWDQ09019 674 aa17.11■□□□□ 0.33
ERCC1-206ENST00000588300 SIM2Q14190 667 aaPredicted RBP17.11■□□□□ 0.33
ERCC1-206ENST00000588300 CCDC65Q8IXS2 484 aa17.11■□□□□ 0.33
ERCC1-206ENST00000588300 GPD1LQ8N335 351 aa17.11■□□□□ 0.33
ERCC1-206ENST00000588300 TOP6BLQ8N6T0 577 aa17.11■□□□□ 0.33
ERCC1-206ENST00000588300 CXorf38Q8TB03 319 aa17.11■□□□□ 0.33
ERCC1-206ENST00000588300 USP13Q92995 863 aaPredicted RBP17.11■□□□□ 0.33
ERCC1-206ENST00000588300 INTS4Q96HW7 963 aaKnown RBP17.11■□□□□ 0.33
ERCC1-206ENST00000588300 FAM83CQ9BQN1 747 aa17.11■□□□□ 0.33
ERCC1-206ENST00000588300 ZSCAN16Q9H4T2 348 aaPredicted RBP17.11■□□□□ 0.33
ERCC1-206ENST00000588300 PDE11AQ9HCR9 933 aa17.11■□□□□ 0.33
ERCC1-206ENST00000588300 PARD6AQ9NPB6 346 aa17.11■□□□□ 0.33
ERCC1-206ENST00000588300 GKN1Q9NS71 199 aa17.11■□□□□ 0.33
ERCC1-206ENST00000588300 TDP1Q9NUW8 608 aa17.11■□□□□ 0.33
ERCC1-206ENST00000588300 GDAP2Q9NXN4 497 aa17.11■□□□□ 0.33
ERCC1-206ENST00000588300 MTMR6Q9Y217 621 aa17.11■□□□□ 0.33
ERCC1-206ENST00000588300 CCL26Q9Y258 94 aa17.11■□□□□ 0.33
ERCC1-206ENST00000588300 R3HCC1Q9Y3T6 440 aaKnown RBP17.11■□□□□ 0.33
ERCC1-206ENST00000588300 SNX9Q9Y5X1 595 aa17.11■□□□□ 0.33
ERCC1-206ENST00000588300 LRP3O75074 770 aa17.1■□□□□ 0.33
ERCC1-206ENST00000588300 PRPF6O94906 941 aaKnown RBP17.1■□□□□ 0.33
ERCC1-206ENST00000588300 ACAT1P24752 427 aaKnown RBP17.1■□□□□ 0.33
ERCC1-206ENST00000588300 PCSK1P29120 753 aa17.1■□□□□ 0.33
ERCC1-206ENST00000588300 LHX1P48742 406 aa17.1■□□□□ 0.33
ERCC1-206ENST00000588300 SPEM2Q0P670 501 aa17.1■□□□□ 0.33
ERCC1-206ENST00000588300 RUNX3Q13761 415 aa17.1■□□□□ 0.33
ERCC1-206ENST00000588300 SDHAF4Q5VUM1 108 aa17.1■□□□□ 0.33
ERCC1-206ENST00000588300 TXNDC8Q6A555 127 aa17.1■□□□□ 0.33
ERCC1-206ENST00000588300 HEATR6Q6AI08 1181 aaKnown RBP17.1■□□□□ 0.33
ERCC1-206ENST00000588300 CC2D1AQ6P1N0 951 aaPredicted RBP17.1■□□□□ 0.33
ERCC1-206ENST00000588300 STXBP4Q6ZWJ1 553 aa17.1■□□□□ 0.33
ERCC1-206ENST00000588300 MON1AQ86VX9 555 aa17.1■□□□□ 0.33
ERCC1-206ENST00000588300 ADGRF2Q8IZF7 708 aa17.1■□□□□ 0.33
ERCC1-206ENST00000588300 PDILTQ8N807 584 aa17.1■□□□□ 0.33
ERCC1-206ENST00000588300 STKLD1Q8NE28 680 aa17.1■□□□□ 0.33
ERCC1-206ENST00000588300 ANKRD36BP1Q96IX9 119 aa17.1■□□□□ 0.33
ERCC1-206ENST00000588300 FAM84AQ96KN4 292 aa17.1■□□□□ 0.33
ERCC1-206ENST00000588300 MTMR12Q9C0I1 747 aa17.1■□□□□ 0.33
ERCC1-206ENST00000588300 HPS4Q9NQG7 708 aa17.1■□□□□ 0.33
ERCC1-206ENST00000588300 HRO43593 1189 aa17.09■□□□□ 0.33
ERCC1-206ENST00000588300 NOL4O94818 638 aa17.09■□□□□ 0.33
ERCC1-206ENST00000588300 CYP2F1P24903 491 aa17.09■□□□□ 0.33
ERCC1-206ENST00000588300 HOXA6P31267 233 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms