RNA–Protein interactions for RNA: ENST00000588131.1

VMP1-207, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-207ENST00000588131 LZTFL1Q9NQ48 299 aa12.01□□□□□ -0.49
VMP1-207ENST00000588131 CRTAC1Q9NQ79 661 aa12.01□□□□□ -0.49
VMP1-207ENST00000588131 TSPAN16Q9UKR8 245 aa12.01□□□□□ -0.49
VMP1-207ENST00000588131 DSEQ9UL01 958 aa12.01□□□□□ -0.49
VMP1-207ENST00000588131 KIAA1257Q9ULG3 409 aa12.01□□□□□ -0.49
VMP1-207ENST00000588131 M0QYV0 167 aa12□□□□□ -0.49
VMP1-207ENST00000588131 PJA2O43164 708 aa12□□□□□ -0.49
VMP1-207ENST00000588131 TRAPPC3O43617 180 aa12□□□□□ -0.49
VMP1-207ENST00000588131 EFEMP2O95967 443 aa12□□□□□ -0.49
VMP1-207ENST00000588131 FTLP02792 175 aaPredicted RBP12□□□□□ -0.49
VMP1-207ENST00000588131 H2AFZP0C0S5 128 aa12□□□□□ -0.49
VMP1-207ENST00000588131 GZMAP12544 262 aa12□□□□□ -0.49
VMP1-207ENST00000588131 PTPN1P18031 435 aaKnown RBP12□□□□□ -0.49
VMP1-207ENST00000588131 CDH5P33151 784 aaPredicted RBP12□□□□□ -0.49
VMP1-207ENST00000588131 CDR1P51861 262 aa12□□□□□ -0.49
VMP1-207ENST00000588131 GALCP54803 685 aa12□□□□□ -0.49
VMP1-207ENST00000588131 CENPCQ03188 943 aa12□□□□□ -0.49
VMP1-207ENST00000588131 CNGA2Q16280 664 aa12□□□□□ -0.49
VMP1-207ENST00000588131 MDH1BQ5I0G3 518 aa12□□□□□ -0.49
VMP1-207ENST00000588131 C9orf50Q5SZB4 431 aa12□□□□□ -0.49
VMP1-207ENST00000588131 SPOUT1Q5T280 376 aaKnown RBP12□□□□□ -0.49
VMP1-207ENST00000588131 C10orf76Q5T2E6 689 aa12□□□□□ -0.49
VMP1-207ENST00000588131 RASIP1Q5U651 963 aa12□□□□□ -0.49
VMP1-207ENST00000588131 FAM171A1Q5VUB5 890 aa12□□□□□ -0.49
VMP1-207ENST00000588131 ARHGAP17Q68EM7 881 aa12□□□□□ -0.49
VMP1-207ENST00000588131 KCNT2Q6UVM3 1135 aa12□□□□□ -0.49
VMP1-207ENST00000588131 LCLAT1Q6UWP7 414 aa12□□□□□ -0.49
VMP1-207ENST00000588131 ZNF662Q6ZS27 426 aa12□□□□□ -0.49
VMP1-207ENST00000588131 H2AFVQ71UI9 128 aa12□□□□□ -0.49
VMP1-207ENST00000588131 TAS1R1Q7RTX1 841 aa12□□□□□ -0.49
VMP1-207ENST00000588131 HERC6Q8IVU3 1022 aa12□□□□□ -0.49
VMP1-207ENST00000588131 SLC39A11Q8N1S5 342 aa12□□□□□ -0.49
VMP1-207ENST00000588131 COLGALT1Q8NBJ5 622 aa12□□□□□ -0.49
VMP1-207ENST00000588131 OR10T2Q8NGX3 314 aa12□□□□□ -0.49
VMP1-207ENST00000588131 UBA3Q8TBC4 463 aa12□□□□□ -0.49
VMP1-207ENST00000588131 ARHGEF26Q96DR7 871 aa12□□□□□ -0.49
VMP1-207ENST00000588131 TNIP3Q96KP6 325 aa12□□□□□ -0.49
VMP1-207ENST00000588131 ZNF558Q96NG5 402 aa12□□□□□ -0.49
VMP1-207ENST00000588131 TMEM209Q96SK2 561 aa12□□□□□ -0.49
VMP1-207ENST00000588131 SLC9A7Q96T83 725 aa12□□□□□ -0.49
VMP1-207ENST00000588131 VN1R3Q9BXE9 311 aa12□□□□□ -0.49
VMP1-207ENST00000588131 CYTH4Q9UIA0 394 aa12□□□□□ -0.49
VMP1-207ENST00000588131 SLC4A7Q9Y6M7 1214 aa12□□□□□ -0.49
VMP1-207ENST00000588131 DUSP10Q9Y6W6 482 aa12□□□□□ -0.49
VMP1-207ENST00000588131 ATP8B3O60423 1300 aa12□□□□□ -0.49
VMP1-207ENST00000588131 SF3B1O75533 1304 aaKnown RBP eCLIP12□□□□□ -0.491e-7■■■■■ 172.3
VMP1-207ENST00000588131 MKI67P46013 3256 aaKnown RBP12□□□□□ -0.49
VMP1-207ENST00000588131 ARHGEF37A1IGU5 675 aa11.99□□□□□ -0.49
VMP1-207ENST00000588131 MYBPHLA2RUH7 354 aa11.99□□□□□ -0.49
VMP1-207ENST00000588131 SYN3O14994 580 aa11.99□□□□□ -0.49
VMP1-207ENST00000588131 LSM8O95777 96 aaKnown RBP11.99□□□□□ -0.49
VMP1-207ENST00000588131 TMEM253P0C7T8 217 aa11.99□□□□□ -0.49
VMP1-207ENST00000588131 LINC00271P0C7V0 271 aa11.99□□□□□ -0.49
VMP1-207ENST00000588131 LAG3P18627 525 aa11.99□□□□□ -0.49
VMP1-207ENST00000588131 ABCB4P21439 1286 aa11.99□□□□□ -0.49
VMP1-207ENST00000588131 FGFR3P22607 806 aa11.99□□□□□ -0.49
VMP1-207ENST00000588131 ADORA2BP29275 332 aa11.99□□□□□ -0.49
VMP1-207ENST00000588131 MAGEA10P43363 369 aaPredicted RBP11.99□□□□□ -0.49
VMP1-207ENST00000588131 ALDH7A1P49419 539 aaKnown RBP11.99□□□□□ -0.49
VMP1-207ENST00000588131 YWHAHQ04917 246 aaPredicted RBP11.99□□□□□ -0.49
VMP1-207ENST00000588131 KIF5AQ12840 1032 aa11.99□□□□□ -0.49
VMP1-207ENST00000588131 ARHGAP29Q52LW3 1261 aa11.99□□□□□ -0.49
VMP1-207ENST00000588131 C2CD6Q53TS8 623 aa11.99□□□□□ -0.49
VMP1-207ENST00000588131 INTS6LQ5JSJ4 861 aaKnown RBP11.99□□□□□ -0.49
VMP1-207ENST00000588131 RTP2Q5QGT7 225 aa11.99□□□□□ -0.49
VMP1-207ENST00000588131 VARS2Q5ST30 1063 aaKnown RBP11.99□□□□□ -0.49
VMP1-207ENST00000588131 PAQR9Q6ZVX9 377 aa11.99□□□□□ -0.49
VMP1-207ENST00000588131 TTC30AQ86WT1 665 aa11.99□□□□□ -0.49
VMP1-207ENST00000588131 RNF168Q8IYW5 571 aaPredicted RBP11.99□□□□□ -0.49
VMP1-207ENST00000588131 TMEM35BQ8NCS4 154 aa11.99□□□□□ -0.49
VMP1-207ENST00000588131 PHOSPHO2Q8TCD6 241 aa11.99□□□□□ -0.49
VMP1-207ENST00000588131 SLC2A14Q8TDB8 520 aa11.99□□□□□ -0.49
VMP1-207ENST00000588131 SECISBP2LQ93073 1101 aaKnown RBP11.99□□□□□ -0.49
VMP1-207ENST00000588131 IGSF21Q96ID5 467 aa11.99□□□□□ -0.49
VMP1-207ENST00000588131 PKMYT1Q99640 499 aa11.99□□□□□ -0.49
VMP1-207ENST00000588131 ACBD6Q9BR61 282 aa11.99□□□□□ -0.49
VMP1-207ENST00000588131 ZBED2Q9BTP6 218 aa11.99□□□□□ -0.49
VMP1-207ENST00000588131 IRX2Q9BZI1 471 aaPredicted RBP11.99□□□□□ -0.49
VMP1-207ENST00000588131 THAP2Q9H0W7 228 aa11.99□□□□□ -0.49
VMP1-207ENST00000588131 LHX5Q9H2C1 402 aa11.99□□□□□ -0.49
VMP1-207ENST00000588131 LUC7LQ9NQ29 371 aaKnown RBP11.99□□□□□ -0.49
VMP1-207ENST00000588131 TMLHEQ9NVH6 421 aa11.99□□□□□ -0.49
VMP1-207ENST00000588131 SALL4Q9UJQ4 1053 aa11.99□□□□□ -0.49
VMP1-207ENST00000588131 CDH9Q9ULB4 789 aa11.99□□□□□ -0.49
VMP1-207ENST00000588131 INTUQ9ULD6 942 aa11.99□□□□□ -0.49
VMP1-207ENST00000588131 NCANO14594 1321 aa11.98□□□□□ -0.49
VMP1-207ENST00000588131 LCHNA4D1U4 455 aa11.98□□□□□ -0.49
VMP1-207ENST00000588131 ANKRD62A6NC57 917 aa11.98□□□□□ -0.49
VMP1-207ENST00000588131 GOLGA6L9A6NEM1 432 aa11.98□□□□□ -0.49
VMP1-207ENST00000588131 CLDN5O00501 218 aa11.98□□□□□ -0.49
VMP1-207ENST00000588131 ATMINO43313 823 aaPredicted RBP11.98□□□□□ -0.49
VMP1-207ENST00000588131 OAZ2O95190 189 aa11.98□□□□□ -0.49
VMP1-207ENST00000588131 OR4Q2P0C623 313 aa11.98□□□□□ -0.49
VMP1-207ENST00000588131 ATP2A2P16615 1042 aaKnown RBP11.98□□□□□ -0.49
VMP1-207ENST00000588131 PCSK1P29120 753 aa11.98□□□□□ -0.49
VMP1-207ENST00000588131 GPD2P43304 727 aa11.98□□□□□ -0.49
VMP1-207ENST00000588131 NSFP46459 744 aaKnown RBP11.98□□□□□ -0.49
VMP1-207ENST00000588131 ELAVL2Q12926 359 aaKnown RBP11.98□□□□□ -0.49
VMP1-207ENST00000588131 PTP4A2Q12974 167 aa11.98□□□□□ -0.49
VMP1-207ENST00000588131 MRPL58Q14197 206 aaKnown RBP11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms