RNA–Protein interactions for RNA: ENST00000587730.5

DDX39A-206, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,813 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-206ENST00000587730 RPA3P35244 121 aaPredicted RBP19.54■□□□□ 0.72
DDX39A-206ENST00000587730 EFNA5P52803 228 aa19.54■□□□□ 0.72
DDX39A-206ENST00000587730 PLCB3Q01970 1234 aa19.54■□□□□ 0.72
DDX39A-206ENST00000587730 TMEM132AQ24JP5 1023 aa19.54■□□□□ 0.72
DDX39A-206ENST00000587730 SGSM1Q2NKQ1 1148 aa19.54■□□□□ 0.72
DDX39A-206ENST00000587730 ADGRD1Q6QNK2 874 aa19.54■□□□□ 0.72
DDX39A-206ENST00000587730 NIM1KQ8IY84 436 aa19.54■□□□□ 0.72
DDX39A-206ENST00000587730 TTLL6Q8N841 843 aa19.54■□□□□ 0.72
DDX39A-206ENST00000587730 ANKLE1Q8NAG6 615 aa19.54■□□□□ 0.72
DDX39A-206ENST00000587730 MCEEQ96PE7 176 aa19.54■□□□□ 0.72
DDX39A-206ENST00000587730 FAM118BQ9BPY3 351 aa19.54■□□□□ 0.72
DDX39A-206ENST00000587730 NIFKQ9BYG3 293 aaKnown RBP19.54■□□□□ 0.72
DDX39A-206ENST00000587730 NIF3L1Q9GZT8 377 aa19.54■□□□□ 0.72
DDX39A-206ENST00000587730 TLE6Q9H808 572 aa19.54■□□□□ 0.72
DDX39A-206ENST00000587730 CYLDQ9NQC7 956 aa19.54■□□□□ 0.72
DDX39A-206ENST00000587730 AGTPBP1Q9UPW5 1226 aa19.54■□□□□ 0.72
DDX39A-206ENST00000587730 MAFBQ9Y5Q3 323 aaPredicted RBP19.54■□□□□ 0.72
DDX39A-206ENST00000587730 PTPRJQ12913 1337 aa19.54■□□□□ 0.72
DDX39A-206ENST00000587730 LRRIQ4A6NIV6 560 aa19.53■□□□□ 0.72
DDX39A-206ENST00000587730 PI4K2BG5E9Z4 385 aa19.53■□□□□ 0.72
DDX39A-206ENST00000587730 IBSPP21815 317 aaPredicted RBP19.53■□□□□ 0.72
DDX39A-206ENST00000587730 RPL7AP62424 266 aaKnown RBP19.53■□□□□ 0.72
DDX39A-206ENST00000587730 ANKRD20A2Q5SQ80 823 aa19.53■□□□□ 0.72
DDX39A-206ENST00000587730 ANKRD20A1Q5TYW2 823 aa19.53■□□□□ 0.72
DDX39A-206ENST00000587730 ANKRD20A3Q5VUR7 823 aa19.53■□□□□ 0.72
DDX39A-206ENST00000587730 DAB2IPQ5VWQ8 1189 aa19.53■□□□□ 0.72
DDX39A-206ENST00000587730 BBS12Q6ZW61 710 aa19.53■□□□□ 0.72
DDX39A-206ENST00000587730 ERICH1Q86X53 443 aa19.53■□□□□ 0.72
DDX39A-206ENST00000587730 ENDOVQ8N8Q3 282 aaKnown RBP19.53■□□□□ 0.72
DDX39A-206ENST00000587730 ZNF75CPQ92670 426 aaPredicted RBP19.53■□□□□ 0.72
DDX39A-206ENST00000587730 ELMO3Q96BJ8 720 aa19.53■□□□□ 0.72
DDX39A-206ENST00000587730 THOC1Q96FV9 657 aaKnown RBP19.53■□□□□ 0.72
DDX39A-206ENST00000587730 FAXDC2Q96IV6 333 aa19.53■□□□□ 0.72
DDX39A-206ENST00000587730 WDR35Q9P2L0 1181 aa19.53■□□□□ 0.72
DDX39A-206ENST00000587730 ZMYND8Q9ULU4 1186 aaPredicted RBP19.53■□□□□ 0.72
DDX39A-206ENST00000587730 WNT10BO00744 389 aa19.53■□□□□ 0.72
DDX39A-206ENST00000587730 MED7O43513 233 aa19.53■□□□□ 0.72
DDX39A-206ENST00000587730 ATG7O95352 703 aa19.53■□□□□ 0.72
DDX39A-206ENST00000587730 CFHP08603 1231 aa19.53■□□□□ 0.72
DDX39A-206ENST00000587730 DPEP1P16444 411 aa19.53■□□□□ 0.72
DDX39A-206ENST00000587730 GLRA2P23416 452 aa19.53■□□□□ 0.72
DDX39A-206ENST00000587730 PTPN4P29074 926 aa19.53■□□□□ 0.72
DDX39A-206ENST00000587730 TGFB2P61812 414 aa19.53■□□□□ 0.72
DDX39A-206ENST00000587730 MTMR2Q13614 643 aa19.53■□□□□ 0.72
DDX39A-206ENST00000587730 ACAP1Q15027 740 aa19.53■□□□□ 0.72
DDX39A-206ENST00000587730 TAZQ16635 292 aa19.53■□□□□ 0.72
DDX39A-206ENST00000587730 CIAPIN1Q6FI81 312 aa19.53■□□□□ 0.72
DDX39A-206ENST00000587730 APLFQ8IW19 511 aaPredicted RBP19.53■□□□□ 0.72
DDX39A-206ENST00000587730 PDIK1LQ8N165 341 aa19.53■□□□□ 0.72
DDX39A-206ENST00000587730 STK32AQ8WU08 396 aa19.53■□□□□ 0.72
DDX39A-206ENST00000587730 TRIM6Q9C030 488 aaPredicted RBP19.53■□□□□ 0.72
DDX39A-206ENST00000587730 ZNF302Q9NR11 478 aa19.53■□□□□ 0.72
DDX39A-206ENST00000587730 CYP39A1Q9NYL5 469 aa19.53■□□□□ 0.72
DDX39A-206ENST00000587730 RABGEF1Q9UJ41 708 aa19.53■□□□□ 0.72
DDX39A-206ENST00000587730 ZFP69BQ9UJL9 534 aa19.53■□□□□ 0.72
DDX39A-206ENST00000587730 ZBTB12Q9Y330 459 aaPredicted RBP19.53■□□□□ 0.72
DDX39A-206ENST00000587730 ABLIM1O14639 778 aa19.52■□□□□ 0.72
DDX39A-206ENST00000587730 WEE2P0C1S8 567 aa19.52■□□□□ 0.72
DDX39A-206ENST00000587730 KRT4P19013 534 aa19.52■□□□□ 0.72
DDX39A-206ENST00000587730 ICAM3P32942 547 aa19.52■□□□□ 0.72
DDX39A-206ENST00000587730 ADCY1Q08828 1119 aa19.52■□□□□ 0.72
DDX39A-206ENST00000587730 ZNF252P-AS1Q0IIN9 211 aa19.52■□□□□ 0.72
DDX39A-206ENST00000587730 CBLBQ13191 982 aa19.52■□□□□ 0.72
DDX39A-206ENST00000587730 WDR72Q3MJ13 1102 aa19.52■□□□□ 0.72
DDX39A-206ENST00000587730 LVRNQ6Q4G3 990 aa19.52■□□□□ 0.72
DDX39A-206ENST00000587730 BZW1Q7L1Q6 419 aaKnown RBP19.52■□□□□ 0.72
DDX39A-206ENST00000587730 C4orf33Q8N1A6 199 aa19.52■□□□□ 0.72
DDX39A-206ENST00000587730 NLGN2Q8NFZ4 835 aa19.52■□□□□ 0.72
DDX39A-206ENST00000587730 APBB2Q92870 758 aa19.52■□□□□ 0.72
DDX39A-206ENST00000587730 SYT17Q9BSW7 474 aa19.52■□□□□ 0.72
DDX39A-206ENST00000587730 FRMD8Q9BZ67 464 aaPredicted RBP19.52■□□□□ 0.72
DDX39A-206ENST00000587730 LHX5Q9H2C1 402 aa19.52■□□□□ 0.72
DDX39A-206ENST00000587730 ZNF541Q9H0D2 1346 aa19.52■□□□□ 0.71
DDX39A-206ENST00000587730 TGDSO95455 350 aa19.51■□□□□ 0.71
DDX39A-206ENST00000587730 IL1BP01584 269 aa19.51■□□□□ 0.71
DDX39A-206ENST00000587730 ZSCAN5DPP0CG00 497 aa19.51■□□□□ 0.71
DDX39A-206ENST00000587730 CTCFP49711 727 aaPredicted RBP19.51■□□□□ 0.71
DDX39A-206ENST00000587730 RSAD2Q8WXG1 361 aa19.51■□□□□ 0.71
DDX39A-206ENST00000587730 ATG4CQ96DT6 458 aa19.51■□□□□ 0.71
DDX39A-206ENST00000587730 TARS2Q9BW92 718 aaKnown RBP19.51■□□□□ 0.71
DDX39A-206ENST00000587730 KLHL11Q9NVR0 708 aa19.51■□□□□ 0.71
DDX39A-206ENST00000587730 FBXO40Q9UH90 709 aa19.51■□□□□ 0.71
DDX39A-206ENST00000587730 TRIM33Q9UPN9 1127 aa19.51■□□□□ 0.71
DDX39A-206ENST00000587730 LRRC42Q9Y546 428 aa19.51■□□□□ 0.71
DDX39A-206ENST00000587730 SIP14410 1827 aa19.51■□□□□ 0.71
DDX39A-206ENST00000587730 IQANK1A0A1B0GTG1 560 aa19.51■□□□□ 0.71
DDX39A-206ENST00000587730 SIGLEC16A6NMB1 481 aa19.51■□□□□ 0.71
DDX39A-206ENST00000587730 F8VP50 259 aa19.51■□□□□ 0.71
DDX39A-206ENST00000587730 RGS20O76081 388 aa19.51■□□□□ 0.71
DDX39A-206ENST00000587730 IFNB1P01574 187 aa19.51■□□□□ 0.71
DDX39A-206ENST00000587730 KCNA3P22001 575 aa19.51■□□□□ 0.71
DDX39A-206ENST00000587730 WNT7BP56706 349 aa19.51■□□□□ 0.71
DDX39A-206ENST00000587730 FASTKD3Q14CZ7 662 aaKnown RBP19.51■□□□□ 0.71
DDX39A-206ENST00000587730 SLC1A5Q15758 541 aa19.51■□□□□ 0.71
DDX39A-206ENST00000587730 DUOXA2Q1HG44 320 aa19.51■□□□□ 0.71
DDX39A-206ENST00000587730 SNRNP48Q6IEG0 339 aaKnown RBP19.51■□□□□ 0.71
DDX39A-206ENST00000587730 NLRP9Q7RTR0 991 aa19.51■□□□□ 0.71
DDX39A-206ENST00000587730 OTOAQ7RTW8 1153 aa19.51■□□□□ 0.71
DDX39A-206ENST00000587730 CHSY1Q86X52 802 aa19.51■□□□□ 0.71
DDX39A-206ENST00000587730 EXOC8Q8IYI6 725 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms