RNA–Protein interactions for RNA: ENST00000587697.1

TNFRSF11A-203, Transcript of TNF receptor superfamily member 11a, humanhuman

TSL 3

Gene TNFRSF11A, Length 528 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-203ENST00000587697 PLXNA3P51805 1871 aa12.65□□□□□ -0.38
TNFRSF11A-203ENST00000587697 COL4A4P53420 1690 aaPredicted RBP12.65□□□□□ -0.38
TNFRSF11A-203ENST00000587697 FAM170AA1A519 330 aa12.65□□□□□ -0.38
TNFRSF11A-203ENST00000587697 ARHGEF37A1IGU5 675 aa12.65□□□□□ -0.38
TNFRSF11A-203ENST00000587697 GRID2IPA4D2P6 1211 aa12.65□□□□□ -0.38
TNFRSF11A-203ENST00000587697 TBKBP1A7MCY6 615 aa12.65□□□□□ -0.38
TNFRSF11A-203ENST00000587697 I3L4J1 428 aa12.65□□□□□ -0.38
TNFRSF11A-203ENST00000587697 M0QYV0 167 aa12.65□□□□□ -0.38
TNFRSF11A-203ENST00000587697 DGKIO75912 1065 aa12.65□□□□□ -0.38
TNFRSF11A-203ENST00000587697 AMHP03971 560 aa12.65□□□□□ -0.38
TNFRSF11A-203ENST00000587697 SETSIPP0DME0 302 aa12.65□□□□□ -0.38
TNFRSF11A-203ENST00000587697 CASQ1P31415 396 aa12.65□□□□□ -0.38
TNFRSF11A-203ENST00000587697 LHX1P48742 406 aa12.65□□□□□ -0.38
TNFRSF11A-203ENST00000587697 WDR5P61964 334 aaKnown RBP12.65□□□□□ -0.38
TNFRSF11A-203ENST00000587697 IFI16Q16666 785 aaKnown RBP12.65□□□□□ -0.38
TNFRSF11A-203ENST00000587697 GOLGA7BQ2TAP0 167 aa12.65□□□□□ -0.38
TNFRSF11A-203ENST00000587697 PPP1R26Q5T8A7 1209 aaPredicted RBP12.65□□□□□ -0.38
TNFRSF11A-203ENST00000587697 KIAA0319Q5VV43 1072 aa12.65□□□□□ -0.38
TNFRSF11A-203ENST00000587697 C12orf29Q8N999 325 aa12.65□□□□□ -0.38
TNFRSF11A-203ENST00000587697 LRRC57Q8N9N7 239 aa12.65□□□□□ -0.38
TNFRSF11A-203ENST00000587697 B3GALNT2Q8NCR0 500 aa12.65□□□□□ -0.38
TNFRSF11A-203ENST00000587697 TPCN2Q8NHX9 752 aa12.65□□□□□ -0.38
TNFRSF11A-203ENST00000587697 SLC35G2Q8TBE7 412 aa12.65□□□□□ -0.38
TNFRSF11A-203ENST00000587697 TOP1MTQ969P6 601 aa12.65□□□□□ -0.38
TNFRSF11A-203ENST00000587697 TNIP3Q96KP6 325 aa12.65□□□□□ -0.38
TNFRSF11A-203ENST00000587697 FAM193BQ96PV7 902 aaPredicted RBP12.65□□□□□ -0.38
TNFRSF11A-203ENST00000587697 ALS2CR12Q96Q35 445 aa12.65□□□□□ -0.38
TNFRSF11A-203ENST00000587697 RTP3Q9BQQ7 232 aa12.65□□□□□ -0.38
TNFRSF11A-203ENST00000587697 C11orf70Q9BRQ4 267 aa12.65□□□□□ -0.38
TNFRSF11A-203ENST00000587697 MARCH5Q9NX47 278 aa12.65□□□□□ -0.38
TNFRSF11A-203ENST00000587697 DDX43Q9NXZ2 648 aaKnown RBP12.65□□□□□ -0.38
TNFRSF11A-203ENST00000587697 HCSTQ9UBK5 93 aa12.65□□□□□ -0.38
TNFRSF11A-203ENST00000587697 CNOT8Q9UFF9 292 aaKnown RBP12.65□□□□□ -0.38
TNFRSF11A-203ENST00000587697 TSPAN16Q9UKR8 245 aa12.65□□□□□ -0.38
TNFRSF11A-203ENST00000587697 DSEQ9UL01 958 aa12.65□□□□□ -0.38
TNFRSF11A-203ENST00000587697 COG5Q9UP83 839 aa12.65□□□□□ -0.38
TNFRSF11A-203ENST00000587697 CEP83Q9Y592 693 aa12.65□□□□□ -0.38
TNFRSF11A-203ENST00000587697 ZNF638Q14966 1978 aaKnown RBP12.65□□□□□ -0.38
TNFRSF11A-203ENST00000587697 TCRBV5S1A1TA0A578 114 aa12.64□□□□□ -0.39
TNFRSF11A-203ENST00000587697 ATMINO43313 823 aaPredicted RBP12.64□□□□□ -0.39
TNFRSF11A-203ENST00000587697 CALB1P05937 261 aa12.64□□□□□ -0.39
TNFRSF11A-203ENST00000587697 PDGFRBP09619 1106 aa12.64□□□□□ -0.39
TNFRSF11A-203ENST00000587697 RRM1P23921 792 aa12.64□□□□□ -0.39
TNFRSF11A-203ENST00000587697 GPD2P43304 727 aa12.64□□□□□ -0.39
TNFRSF11A-203ENST00000587697 OR1G1P47890 313 aa12.64□□□□□ -0.39
TNFRSF11A-203ENST00000587697 SLC11A1P49279 550 aa12.64□□□□□ -0.39
TNFRSF11A-203ENST00000587697 GSCP56915 257 aaPredicted RBP12.64□□□□□ -0.39
TNFRSF11A-203ENST00000587697 DEFB103AP81534 67 aa12.64□□□□□ -0.39
TNFRSF11A-203ENST00000587697 PTPN20Q4JDL3 420 aa12.64□□□□□ -0.39
TNFRSF11A-203ENST00000587697 MMS22LQ6ZRQ5 1243 aa12.64□□□□□ -0.39
TNFRSF11A-203ENST00000587697 SLFN11Q7Z7L1 901 aa12.64□□□□□ -0.39
TNFRSF11A-203ENST00000587697 TTC30AQ86WT1 665 aa12.64□□□□□ -0.39
TNFRSF11A-203ENST00000587697 HASPINQ8TF76 798 aa12.64□□□□□ -0.39
TNFRSF11A-203ENST00000587697 ZNF592Q92610 1267 aa12.64□□□□□ -0.39
TNFRSF11A-203ENST00000587697 ZNF689Q96CS4 500 aaPredicted RBP12.64□□□□□ -0.39
TNFRSF11A-203ENST00000587697 NAPGQ99747 312 aaPredicted RBP12.64□□□□□ -0.39
TNFRSF11A-203ENST00000587697 LPIN3Q9BQK8 851 aa12.64□□□□□ -0.39
TNFRSF11A-203ENST00000587697 SYT15Q9BQS2 421 aa12.64□□□□□ -0.39
TNFRSF11A-203ENST00000587697 OSGEPQ9NPF4 335 aa12.64□□□□□ -0.39
TNFRSF11A-203ENST00000587697 CRTAC1Q9NQ79 661 aa12.64□□□□□ -0.39
TNFRSF11A-203ENST00000587697 FAM49BQ9NUQ9 324 aa12.64□□□□□ -0.39
TNFRSF11A-203ENST00000587697 ADAM22Q9P0K1 906 aa12.64□□□□□ -0.39
TNFRSF11A-203ENST00000587697 UVRAGQ9P2Y5 699 aa12.64□□□□□ -0.39
TNFRSF11A-203ENST00000587697 CDH9Q9ULB4 789 aa12.64□□□□□ -0.39
TNFRSF11A-203ENST00000587697 CTAGE9A4FU28 777 aa12.63□□□□□ -0.39
TNFRSF11A-203ENST00000587697 NRP1O14786 923 aa12.63□□□□□ -0.39
TNFRSF11A-203ENST00000587697 ATP2C2O75185 946 aa12.63□□□□□ -0.39
TNFRSF11A-203ENST00000587697 PALMO75781 387 aa12.63□□□□□ -0.39
TNFRSF11A-203ENST00000587697 CAPN15O75808 1086 aa12.63□□□□□ -0.39
TNFRSF11A-203ENST00000587697 ACRP10323 421 aa12.63□□□□□ -0.39
TNFRSF11A-203ENST00000587697 CCDC130P13994 396 aa12.63□□□□□ -0.39
TNFRSF11A-203ENST00000587697 PTPN1P18031 435 aaKnown RBP12.63□□□□□ -0.39
TNFRSF11A-203ENST00000587697 ACAT1P24752 427 aaKnown RBP12.63□□□□□ -0.39
TNFRSF11A-203ENST00000587697 TKTP29401 623 aaKnown RBP12.63□□□□□ -0.39
TNFRSF11A-203ENST00000587697 NOP2P46087 812 aaKnown RBP12.63□□□□□ -0.39
TNFRSF11A-203ENST00000587697 PSMC1P62191 440 aaKnown RBP12.63□□□□□ -0.39
TNFRSF11A-203ENST00000587697 AMPD2Q01433 879 aa12.63□□□□□ -0.39
TNFRSF11A-203ENST00000587697 FPGSQ05932 587 aa12.63□□□□□ -0.39
TNFRSF11A-203ENST00000587697 PDCLQ13371 301 aa12.63□□□□□ -0.39
TNFRSF11A-203ENST00000587697 PPIGQ13427 754 aaKnown RBP eCLIP12.63□□□□□ -0.39
TNFRSF11A-203ENST00000587697 LIN9Q5TKA1 542 aa12.63□□□□□ -0.39
TNFRSF11A-203ENST00000587697 PLEKHA7Q6IQ23 1121 aa12.63□□□□□ -0.39
TNFRSF11A-203ENST00000587697 C11orf63Q6NUN7 778 aa12.63□□□□□ -0.39
TNFRSF11A-203ENST00000587697 C16orf59Q7L2K0 433 aa12.63□□□□□ -0.39
TNFRSF11A-203ENST00000587697 METTL23Q86XA0 190 aa12.63□□□□□ -0.39
TNFRSF11A-203ENST00000587697 FUKQ8N0W3 1084 aa12.63□□□□□ -0.39
TNFRSF11A-203ENST00000587697 PKMYT1Q99640 499 aa12.63□□□□□ -0.39
TNFRSF11A-203ENST00000587697 HNRNPABQ99729 332 aaKnown RBP12.63□□□□□ -0.39
TNFRSF11A-203ENST00000587697 NUP85Q9BW27 656 aa12.63□□□□□ -0.39
TNFRSF11A-203ENST00000587697 COLEC11Q9BWP8 271 aa12.63□□□□□ -0.39
TNFRSF11A-203ENST00000587697 CWH43Q9H720 699 aa12.63□□□□□ -0.39
TNFRSF11A-203ENST00000587697 CTTNBP2NLQ9P2B4 639 aa12.63□□□□□ -0.39
TNFRSF11A-203ENST00000587697 ADAM28Q9UKQ2 775 aa12.63□□□□□ -0.39
TNFRSF11A-203ENST00000587697 PRG3Q9Y2Y8 225 aaPredicted RBP12.63□□□□□ -0.39
TNFRSF11A-203ENST00000587697 JRKLQ9Y4A0 524 aa12.63□□□□□ -0.39
TNFRSF11A-203ENST00000587697 TIMM13Q9Y5L4 95 aaPredicted RBP12.63□□□□□ -0.39
TNFRSF11A-203ENST00000587697 SYN3O14994 580 aa12.62□□□□□ -0.39
TNFRSF11A-203ENST00000587697 BUB1BO60566 1050 aaPredicted RBP12.62□□□□□ -0.39
TNFRSF11A-203ENST00000587697 UPP2O95045 317 aa12.62□□□□□ -0.39
TNFRSF11A-203ENST00000587697 EFEMP2O95967 443 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms