RNA–Protein interactions for RNA: ENST00000587537.5

CLPTM1-207, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2

Gene CLPTM1, Length 737 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-207ENST00000587537 UBXN6Q9BZV1 441 aa10.99□□□□□ -0.65
CLPTM1-207ENST00000587537 ELOVL4Q9GZR5 314 aa10.99□□□□□ -0.65
CLPTM1-207ENST00000587537 PRO3102Q9H379 93 aa10.99□□□□□ -0.65
CLPTM1-207ENST00000587537 HAUS4Q9H6D7 363 aa10.99□□□□□ -0.65
CLPTM1-207ENST00000587537 NHEJ1Q9H9Q4 299 aaPredicted RBP10.99□□□□□ -0.65
CLPTM1-207ENST00000587537 SLC28A3Q9HAS3 691 aa10.99□□□□□ -0.65
CLPTM1-207ENST00000587537 PNPLA8Q9NP80 782 aa10.99□□□□□ -0.65
CLPTM1-207ENST00000587537 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.99□□□□□ -0.65
CLPTM1-207ENST00000587537 NOCTQ9UK39 431 aaKnown RBP10.99□□□□□ -0.65
CLPTM1-207ENST00000587537 VWA8A3KMH1 1905 aa10.99□□□□□ -0.65
CLPTM1-207ENST00000587537 EIF3CLB5ME19 914 aaKnown RBP10.98□□□□□ -0.65
CLPTM1-207ENST00000587537 NT5C1B-RDH14C9J2C7 533 aa10.98□□□□□ -0.65
CLPTM1-207ENST00000587537 RBAK-RBAKDNI3L0D1 243 aa10.98□□□□□ -0.65
CLPTM1-207ENST00000587537 O00370 1275 aa10.98□□□□□ -0.65
CLPTM1-207ENST00000587537 TBC1D4O60343 1298 aa10.98□□□□□ -0.65
CLPTM1-207ENST00000587537 LCA5LO95447 670 aa10.98□□□□□ -0.65
CLPTM1-207ENST00000587537 CA3P07451 260 aa10.98□□□□□ -0.65
CLPTM1-207ENST00000587537 SKILP12757 684 aa10.98□□□□□ -0.65
CLPTM1-207ENST00000587537 CDH5P33151 784 aaPredicted RBP10.98□□□□□ -0.65
CLPTM1-207ENST00000587537 MAGEA11P43364 429 aa10.98□□□□□ -0.65
CLPTM1-207ENST00000587537 NDUFV1P49821 464 aa10.98□□□□□ -0.65
CLPTM1-207ENST00000587537 BCAT1P54687 386 aa10.98□□□□□ -0.65
CLPTM1-207ENST00000587537 GPR17Q13304 367 aa10.98□□□□□ -0.65
CLPTM1-207ENST00000587537 SMC1AQ14683 1233 aaKnown RBP10.98□□□□□ -0.65
CLPTM1-207ENST00000587537 LRIT3Q3SXY7 679 aa10.98□□□□□ -0.65
CLPTM1-207ENST00000587537 CFAP221Q4G0U5 840 aa10.98□□□□□ -0.65
CLPTM1-207ENST00000587537 KIAA0319Q5VV43 1072 aa10.98□□□□□ -0.65
CLPTM1-207ENST00000587537 SCARA3Q6AZY7 606 aa10.98□□□□□ -0.65
CLPTM1-207ENST00000587537 VSTM1Q6UX27 236 aa10.98□□□□□ -0.65
CLPTM1-207ENST00000587537 ACOT1Q86TX2 421 aa10.98□□□□□ -0.65
CLPTM1-207ENST00000587537 SLC47A2Q86VL8 602 aa10.98□□□□□ -0.65
CLPTM1-207ENST00000587537 CEP57Q86XR8 500 aa10.98□□□□□ -0.65
CLPTM1-207ENST00000587537 VPS52Q8N1B4 723 aa10.98□□□□□ -0.65
CLPTM1-207ENST00000587537 ANKRD52Q8NB46 1076 aa10.98□□□□□ -0.65
CLPTM1-207ENST00000587537 KLHL23Q8NBE8 558 aa10.98□□□□□ -0.65
CLPTM1-207ENST00000587537 FBXO22Q8NEZ5 403 aa10.98□□□□□ -0.65
CLPTM1-207ENST00000587537 SPPL2BQ8TCT7 592 aa10.98□□□□□ -0.65
CLPTM1-207ENST00000587537 DDX1Q92499 740 aaKnown RBP10.98□□□□□ -0.65
CLPTM1-207ENST00000587537 RABGGTAQ92696 567 aa10.98□□□□□ -0.65
CLPTM1-207ENST00000587537 PPP2R3CQ969Q6 453 aa10.98□□□□□ -0.65
CLPTM1-207ENST00000587537 CYFIP2Q96F07 1278 aa10.98□□□□□ -0.65
CLPTM1-207ENST00000587537 SMARCD1Q96GM5 515 aa10.98□□□□□ -0.65
CLPTM1-207ENST00000587537 EIF3CQ99613 913 aaKnown RBP10.98□□□□□ -0.65
CLPTM1-207ENST00000587537 SYT11Q9BT88 431 aa10.98□□□□□ -0.65
CLPTM1-207ENST00000587537 EMILIN2Q9BXX0 1053 aa10.98□□□□□ -0.65
CLPTM1-207ENST00000587537 PBX4Q9BYU1 374 aa10.98□□□□□ -0.65
CLPTM1-207ENST00000587537 ZCWPW1Q9H0M4 648 aa10.98□□□□□ -0.65
CLPTM1-207ENST00000587537 ZBP1Q9H171 429 aa10.98□□□□□ -0.65
CLPTM1-207ENST00000587537 RXFP1Q9HBX9 757 aa10.98□□□□□ -0.65
CLPTM1-207ENST00000587537 ARHGAP20Q9P2F6 1191 aa10.98□□□□□ -0.65
CLPTM1-207ENST00000587537 CACNG4Q9UBN1 327 aa10.98□□□□□ -0.65
CLPTM1-207ENST00000587537 INTUQ9ULD6 942 aa10.98□□□□□ -0.65
CLPTM1-207ENST00000587537 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.98□□□□□ -0.65
CLPTM1-207ENST00000587537 H3BNC9 293 aa10.97□□□□□ -0.65
CLPTM1-207ENST00000587537 NDUFA10O95299 355 aa10.97□□□□□ -0.65
CLPTM1-207ENST00000587537 ADH1AP07327 375 aa10.97□□□□□ -0.65
CLPTM1-207ENST00000587537 PDGFRBP09619 1106 aa10.97□□□□□ -0.65
CLPTM1-207ENST00000587537 MYBL1P10243 752 aa10.97□□□□□ -0.65
CLPTM1-207ENST00000587537 EIF4A3P38919 411 aaKnown RBP10.97□□□□□ -0.65
CLPTM1-207ENST00000587537 ACADSBP45954 432 aa10.97□□□□□ -0.65
CLPTM1-207ENST00000587537 NSFP46459 744 aaKnown RBP10.97□□□□□ -0.65
CLPTM1-207ENST00000587537 KIF11P52732 1056 aa10.97□□□□□ -0.65
CLPTM1-207ENST00000587537 TAP1Q03518 808 aa10.97□□□□□ -0.65
CLPTM1-207ENST00000587537 BST2Q10589 180 aaKnown RBP10.97□□□□□ -0.65
CLPTM1-207ENST00000587537 PTPROQ16827 1216 aa10.97□□□□□ -0.65
CLPTM1-207ENST00000587537 ASTE1Q2TB18 679 aaPredicted RBP10.97□□□□□ -0.65
CLPTM1-207ENST00000587537 ZNF394Q53GI3 561 aa10.97□□□□□ -0.65
CLPTM1-207ENST00000587537 PPP2R2DQ66LE6 453 aa10.97□□□□□ -0.65
CLPTM1-207ENST00000587537 ZNF571Q7Z3V5 609 aaPredicted RBP10.97□□□□□ -0.65
CLPTM1-207ENST00000587537 NOP9Q86U38 636 aaKnown RBP10.97□□□□□ -0.65
CLPTM1-207ENST00000587537 OSTM1Q86WC4 334 aa10.97□□□□□ -0.65
CLPTM1-207ENST00000587537 TMEM173Q86WV6 379 aaPredicted RBP10.97□□□□□ -0.65
CLPTM1-207ENST00000587537 SPATA2LQ8IUW3 424 aaPredicted RBP10.97□□□□□ -0.65
CLPTM1-207ENST00000587537 TMEM139Q8IV31 216 aa10.97□□□□□ -0.65
CLPTM1-207ENST00000587537 LNX1Q8TBB1 728 aaPredicted RBP10.97□□□□□ -0.65
CLPTM1-207ENST00000587537 BCL7CQ8WUZ0 217 aaPredicted RBP10.97□□□□□ -0.65
CLPTM1-207ENST00000587537 UBE2Q2Q8WVN8 375 aa10.97□□□□□ -0.65
CLPTM1-207ENST00000587537 RIN2Q8WYP3 895 aaPredicted RBP10.97□□□□□ -0.65
CLPTM1-207ENST00000587537 TLR9Q9NR96 1032 aa10.97□□□□□ -0.65
CLPTM1-207ENST00000587537 EHD2Q9NZN4 543 aa10.97□□□□□ -0.65
CLPTM1-207ENST00000587537 HCSTQ9UBK5 93 aa10.97□□□□□ -0.65
CLPTM1-207ENST00000587537 LCMT1Q9UIC8 334 aa10.97□□□□□ -0.65
CLPTM1-207ENST00000587537 STRIP2Q9ULQ0 834 aa10.97□□□□□ -0.65
CLPTM1-207ENST00000587537 PCDHB5Q9Y5E4 795 aa10.97□□□□□ -0.65
CLPTM1-207ENST00000587537 EPN1Q9Y6I3 576 aaPredicted RBP10.97□□□□□ -0.65
CLPTM1-207ENST00000587537 LCHNA4D1U4 455 aa10.96□□□□□ -0.65
CLPTM1-207ENST00000587537 GOLGA6L9A6NEM1 432 aa10.96□□□□□ -0.65
CLPTM1-207ENST00000587537 F8W810 466 aa10.96□□□□□ -0.65
CLPTM1-207ENST00000587537 I3L4J1 428 aa10.96□□□□□ -0.65
CLPTM1-207ENST00000587537 TRIM66O15016 1216 aa10.96□□□□□ -0.65
CLPTM1-207ENST00000587537 ZSCAN12O43309 604 aa10.96□□□□□ -0.65
CLPTM1-207ENST00000587537 RTN2O75298 545 aa10.96□□□□□ -0.65
CLPTM1-207ENST00000587537 CYP1A1P04798 512 aaPredicted RBP10.96□□□□□ -0.65
CLPTM1-207ENST00000587537 CALB1P05937 261 aa10.96□□□□□ -0.65
CLPTM1-207ENST00000587537 CCDC175P0C221 793 aa10.96□□□□□ -0.65
CLPTM1-207ENST00000587537 FAM200BP0CF97 657 aa10.96□□□□□ -0.65
CLPTM1-207ENST00000587537 CPB1P15086 417 aa10.96□□□□□ -0.65
CLPTM1-207ENST00000587537 DNAJB2P25686 324 aa10.96□□□□□ -0.65
CLPTM1-207ENST00000587537 LMO2P25791 158 aa10.96□□□□□ -0.65
CLPTM1-207ENST00000587537 PBX3P40426 434 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms