RNA–Protein interactions for RNA: ENST00000585967.5

MBD3-204, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 4

Gene MBD3, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-204ENST00000585967 STXBP5Q5T5C0 1151 aa18.31■□□□□ 0.52
MBD3-204ENST00000585967 C1orf127Q8N9H9 656 aa18.31■□□□□ 0.52
MBD3-204ENST00000585967 CBWD1Q9BRT8 395 aa18.31■□□□□ 0.52
MBD3-204ENST00000585967 LMAN1LQ9HAT1 526 aa18.31■□□□□ 0.52
MBD3-204ENST00000585967 GDAP2Q9NXN4 497 aa18.31■□□□□ 0.52
MBD3-204ENST00000585967 DDX43Q9NXZ2 648 aaKnown RBP18.31■□□□□ 0.52
MBD3-204ENST00000585967 SNX9Q9Y5X1 595 aa18.31■□□□□ 0.52
MBD3-204ENST00000585967 GOLGA8IPA6NC78 632 aa18.3■□□□□ 0.52
MBD3-204ENST00000585967 GOLGA8JA6NMD2 632 aa18.3■□□□□ 0.52
MBD3-204ENST00000585967 SLC38A8A6NNN8 435 aa18.3■□□□□ 0.52
MBD3-204ENST00000585967 ARNTLO00327 626 aa18.3■□□□□ 0.52
MBD3-204ENST00000585967 PRPF40AO75400 957 aaKnown RBP18.3■□□□□ 0.52
MBD3-204ENST00000585967 PRPF6O94906 941 aaKnown RBP18.3■□□□□ 0.52
MBD3-204ENST00000585967 SDHBP21912 280 aa18.3■□□□□ 0.52
MBD3-204ENST00000585967 SNRPFP62306 86 aaKnown RBP18.3■□□□□ 0.52
MBD3-204ENST00000585967 MAPRE1Q15691 268 aaKnown RBP18.3■□□□□ 0.52
MBD3-204ENST00000585967 INTS6LQ5JSJ4 861 aaKnown RBP18.3■□□□□ 0.52
MBD3-204ENST00000585967 C4orf50Q6ZRC1 276 aa18.3■□□□□ 0.52
MBD3-204ENST00000585967 DPH6Q7L8W6 267 aa18.3■□□□□ 0.52
MBD3-204ENST00000585967 HS2ST1Q7LGA3 356 aa18.3■□□□□ 0.52
MBD3-204ENST00000585967 SPATA2LQ8IUW3 424 aaPredicted RBP18.3■□□□□ 0.52
MBD3-204ENST00000585967 ADGRF2Q8IZF7 708 aa18.3■□□□□ 0.52
MBD3-204ENST00000585967 PDCL2Q8N4E4 241 aa18.3■□□□□ 0.52
MBD3-204ENST00000585967 FUBP3Q96I24 572 aaKnown RBP eCLIP18.3■□□□□ 0.52
MBD3-204ENST00000585967 MTMR12Q9C0I1 747 aa18.3■□□□□ 0.52
MBD3-204ENST00000585967 EPC1Q9H2F5 836 aa18.3■□□□□ 0.52
MBD3-204ENST00000585967 PCIF1Q9H4Z3 704 aa18.3■□□□□ 0.52
MBD3-204ENST00000585967 KBTBD4Q9NVX7 518 aa18.3■□□□□ 0.52
MBD3-204ENST00000585967 FAM13BQ9NYF5 915 aa18.3■□□□□ 0.52
MBD3-204ENST00000585967 GMEB2Q9UKD1 530 aa18.3■□□□□ 0.52
MBD3-204ENST00000585967 SPECC1L-ADORA2AF8WAN1 911 aa18.29■□□□□ 0.52
MBD3-204ENST00000585967 PDE6CP51160 858 aa18.29■□□□□ 0.52
MBD3-204ENST00000585967 CYP4F8P98187 520 aa18.29■□□□□ 0.52
MBD3-204ENST00000585967 DUOXA2Q1HG44 320 aa18.29■□□□□ 0.52
MBD3-204ENST00000585967 ITPRIPL2Q3MIP1 535 aa18.29■□□□□ 0.52
MBD3-204ENST00000585967 FAM26FQ5R3K3 315 aa18.29■□□□□ 0.52
MBD3-204ENST00000585967 CC2D1AQ6P1N0 951 aaPredicted RBP18.29■□□□□ 0.52
MBD3-204ENST00000585967 KIAA2013Q8IYS2 634 aa18.29■□□□□ 0.52
MBD3-204ENST00000585967 CMTM8Q8IZV2 173 aa18.29■□□□□ 0.52
MBD3-204ENST00000585967 SYNPOQ8N3V7 929 aa18.29■□□□□ 0.52
MBD3-204ENST00000585967 SPEM1Q8N4L4 309 aa18.29■□□□□ 0.52
MBD3-204ENST00000585967 FSIP1Q8NA03 581 aa18.29■□□□□ 0.52
MBD3-204ENST00000585967 GIPC2Q8TF65 315 aa18.29■□□□□ 0.52
MBD3-204ENST00000585967 SNX21Q969T3 373 aa18.29■□□□□ 0.52
MBD3-204ENST00000585967 DHX58Q96C10 678 aa18.29■□□□□ 0.52
MBD3-204ENST00000585967 FNBP1Q96RU3 617 aa18.29■□□□□ 0.52
MBD3-204ENST00000585967 TRIM9Q9C026 710 aa18.29■□□□□ 0.52
MBD3-204ENST00000585967 IKZF4Q9H2S9 585 aa18.29■□□□□ 0.52
MBD3-204ENST00000585967 PDE11AQ9HCR9 933 aa18.29■□□□□ 0.52
MBD3-204ENST00000585967 EHD2Q9NZN4 543 aa18.29■□□□□ 0.52
MBD3-204ENST00000585967 L1RE1Q9UN81 338 aa18.29■□□□□ 0.52
MBD3-204ENST00000585967 SMG5Q9UPR3 1016 aaKnown RBP18.29■□□□□ 0.52
MBD3-204ENST00000585967 A0A087X0B3 334 aa18.28■□□□□ 0.52
MBD3-204ENST00000585967 MYBPHLA2RUH7 354 aa18.28■□□□□ 0.52
MBD3-204ENST00000585967 NRG2O14511 850 aaPredicted RBP18.28■□□□□ 0.52
MBD3-204ENST00000585967 LILRB5O75023 590 aa18.28■□□□□ 0.52
MBD3-204ENST00000585967 CTHP32929 405 aa18.28■□□□□ 0.52
MBD3-204ENST00000585967 CXCL12P48061 93 aa18.28■□□□□ 0.52
MBD3-204ENST00000585967 CFAP221Q4G0U5 840 aa18.28■□□□□ 0.52
MBD3-204ENST00000585967 ATL3Q6DD88 541 aa18.28■□□□□ 0.52
MBD3-204ENST00000585967 WDR49Q8IV35 697 aa18.28■□□□□ 0.52
MBD3-204ENST00000585967 SUMF1Q8NBK3 374 aa18.28■□□□□ 0.52
MBD3-204ENST00000585967 NELL1Q92832 810 aa18.28■□□□□ 0.52
MBD3-204ENST00000585967 TRMT2BQ96GJ1 504 aaKnown RBP18.28■□□□□ 0.52
MBD3-204ENST00000585967 PI4K2AQ9BTU6 479 aa18.28■□□□□ 0.52
MBD3-204ENST00000585967 MKNK1Q9BUB5 465 aa18.28■□□□□ 0.52
MBD3-204ENST00000585967 INTS13Q9NVM9 706 aa18.28■□□□□ 0.52
MBD3-204ENST00000585967 HSPBP1Q9NZL4 362 aa18.28■□□□□ 0.52
MBD3-204ENST00000585967 CGNQ9P2M7 1197 aaKnown RBP18.28■□□□□ 0.52
MBD3-204ENST00000585967 CFAP45Q9UL16 551 aa18.28■□□□□ 0.52
MBD3-204ENST00000585967 MAGED2Q9UNF1 606 aaPredicted RBP18.28■□□□□ 0.52
MBD3-204ENST00000585967 PRAMEF12O95522 483 aa18.27■□□□□ 0.52
MBD3-204ENST00000585967 NLRP12P59046 1061 aa18.27■□□□□ 0.52
MBD3-204ENST00000585967 FZD5Q13467 585 aa18.27■□□□□ 0.52
MBD3-204ENST00000585967 E2F4Q16254 413 aa18.27■□□□□ 0.52
MBD3-204ENST00000585967 CNNM4Q6P4Q7 775 aa18.27■□□□□ 0.52
MBD3-204ENST00000585967 LRRTM3Q86VH5 581 aa18.27■□□□□ 0.52
MBD3-204ENST00000585967 ZNF687Q8N1G0 1237 aa18.27■□□□□ 0.52
MBD3-204ENST00000585967 RSPRY1Q96DX4 576 aa18.27■□□□□ 0.52
MBD3-204ENST00000585967 HPDLQ96IR7 371 aa18.27■□□□□ 0.52
MBD3-204ENST00000585967 CEP295NLQ96MC4 621 aa18.27■□□□□ 0.52
MBD3-204ENST00000585967 IL21Q9HBE4 155 aa18.27■□□□□ 0.52
MBD3-204ENST00000585967 GPR179Q6PRD1 2367 aa18.27■□□□□ 0.52
MBD3-204ENST00000585967 ATG2BQ96BY7 2078 aa18.27■□□□□ 0.51
MBD3-204ENST00000585967 NCANO14594 1321 aa18.26■□□□□ 0.51
MBD3-204ENST00000585967 SHISA7A6NL88 538 aa18.26■□□□□ 0.51
MBD3-204ENST00000585967 CHRNB1P11230 501 aa18.26■□□□□ 0.51
MBD3-204ENST00000585967 ANXA13P27216 316 aa18.26■□□□□ 0.51
MBD3-204ENST00000585967 CNR2P34972 360 aa18.26■□□□□ 0.51
MBD3-204ENST00000585967 ME1P48163 572 aa18.26■□□□□ 0.51
MBD3-204ENST00000585967 ZNF268Q14587 947 aaPredicted RBP18.26■□□□□ 0.51
MBD3-204ENST00000585967 SNRNP35Q16560 246 aaKnown RBP18.26■□□□□ 0.51
MBD3-204ENST00000585967 TSSK4Q6SA08 328 aa18.26■□□□□ 0.51
MBD3-204ENST00000585967 UNC13DQ70J99 1090 aa18.26■□□□□ 0.51
MBD3-204ENST00000585967 MAB21L3Q8N8X9 362 aa18.26■□□□□ 0.51
MBD3-204ENST00000585967 GOLGA5Q8TBA6 731 aa18.26■□□□□ 0.51
MBD3-204ENST00000585967 TDP1Q9NUW8 608 aa18.26■□□□□ 0.51
MBD3-204ENST00000585967 GTSE1Q9NYZ3 720 aa18.26■□□□□ 0.51
MBD3-204ENST00000585967 CDH9Q9ULB4 789 aa18.26■□□□□ 0.51
MBD3-204ENST00000585967 MYO16Q9Y6X6 1858 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms