RNA–Protein interactions for RNA: ENST00000584755.1

UBBP4-202, Transcript of ubiquitin B pseudogene 4, humanhuman

TSL 1 (best) BASIC

Gene UBBP4, Length 1,459 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP4-202ENST00000584755 DPEP3Q9H4B8 488 aa14.83□□□□□ -0.03
UBBP4-202ENST00000584755 CYTH4Q9UIA0 394 aa14.83□□□□□ -0.03
UBBP4-202ENST00000584755 TSPAN16Q9UKR8 245 aa14.83□□□□□ -0.03
UBBP4-202ENST00000584755 SAR1BQ9Y6B6 198 aa14.83□□□□□ -0.03
UBBP4-202ENST00000584755 TSC2P49815 1807 aa14.83□□□□□ -0.04
UBBP4-202ENST00000584755 LTBP2Q14767 1821 aa14.83□□□□□ -0.04
UBBP4-202ENST00000584755 FAM170AA1A519 330 aa14.82□□□□□ -0.04
UBBP4-202ENST00000584755 HCRTO43612 131 aa14.82□□□□□ -0.04
UBBP4-202ENST00000584755 B3GAT3O94766 335 aa14.82□□□□□ -0.04
UBBP4-202ENST00000584755 TIMP1P01033 207 aa14.82□□□□□ -0.04
UBBP4-202ENST00000584755 PFKMP08237 780 aa14.82□□□□□ -0.04
UBBP4-202ENST00000584755 SETSIPP0DME0 302 aa14.82□□□□□ -0.04
UBBP4-202ENST00000584755 GABRB2P47870 512 aa14.82□□□□□ -0.04
UBBP4-202ENST00000584755 LHX1P48742 406 aa14.82□□□□□ -0.04
UBBP4-202ENST00000584755 PTPN20Q4JDL3 420 aa14.82□□□□□ -0.04
UBBP4-202ENST00000584755 DSTYKQ6XUX3 929 aa14.82□□□□□ -0.04
UBBP4-202ENST00000584755 NT5DC3Q86UY8 548 aa14.82□□□□□ -0.04
UBBP4-202ENST00000584755 ZNF280BQ86YH2 543 aa14.82□□□□□ -0.04
UBBP4-202ENST00000584755 SUSD3Q96L08 255 aa14.82□□□□□ -0.04
UBBP4-202ENST00000584755 TRIM43BA6NCK2 446 aa14.82□□□□□ -0.04
UBBP4-202ENST00000584755 M0QYV0 167 aa14.82□□□□□ -0.04
UBBP4-202ENST00000584755 FTCDO95954 541 aa14.82□□□□□ -0.04
UBBP4-202ENST00000584755 ODC1P11926 461 aa14.82□□□□□ -0.04
UBBP4-202ENST00000584755 GTF2F1P35269 517 aaKnown RBP eCLIP14.82□□□□□ -0.04
UBBP4-202ENST00000584755 MAMLD1Q13495 774 aa14.82□□□□□ -0.04
UBBP4-202ENST00000584755 WHAMMP3Q1A5X7 153 aa14.82□□□□□ -0.04
UBBP4-202ENST00000584755 DEFB128Q7Z7B8 93 aa14.82□□□□□ -0.04
UBBP4-202ENST00000584755 DAAM2Q86T65 1068 aa14.82□□□□□ -0.04
UBBP4-202ENST00000584755 TTC30AQ86WT1 665 aa14.82□□□□□ -0.04
UBBP4-202ENST00000584755 ERICH1Q86X53 443 aa14.82□□□□□ -0.04
UBBP4-202ENST00000584755 B3GALNT2Q8NCR0 500 aa14.82□□□□□ -0.04
UBBP4-202ENST00000584755 RABGGTAQ92696 567 aa14.82□□□□□ -0.04
UBBP4-202ENST00000584755 TRIM43Q96BQ3 446 aaPredicted RBP14.82□□□□□ -0.04
UBBP4-202ENST00000584755 MCOLN1Q9GZU1 580 aa14.82□□□□□ -0.04
UBBP4-202ENST00000584755 MRPL47Q9HD33 250 aaKnown RBP14.82□□□□□ -0.04
UBBP4-202ENST00000584755 PARVAQ9NVD7 372 aa14.82□□□□□ -0.04
UBBP4-202ENST00000584755 CHORDC1Q9UHD1 332 aaPredicted RBP14.82□□□□□ -0.04
UBBP4-202ENST00000584755 DSEQ9UL01 958 aa14.82□□□□□ -0.04
UBBP4-202ENST00000584755 STRIP2Q9ULQ0 834 aa14.82□□□□□ -0.04
UBBP4-202ENST00000584755 HYOU1Q9Y4L1 999 aa14.82□□□□□ -0.04
UBBP4-202ENST00000584755 SCINQ9Y6U3 715 aa14.82□□□□□ -0.04
UBBP4-202ENST00000584755 ARHGEF37A1IGU5 675 aa14.81□□□□□ -0.04
UBBP4-202ENST00000584755 NCK2O43639 380 aa14.81□□□□□ -0.04
UBBP4-202ENST00000584755 KIF4AO95239 1232 aa14.81□□□□□ -0.04
UBBP4-202ENST00000584755 SLU7O95391 586 aaKnown RBP14.81□□□□□ -0.04
UBBP4-202ENST00000584755 PDGFRBP09619 1106 aa14.81□□□□□ -0.04
UBBP4-202ENST00000584755 TCP1P17987 556 aaKnown RBP14.81□□□□□ -0.04
UBBP4-202ENST00000584755 TYMPP19971 482 aa14.81□□□□□ -0.04
UBBP4-202ENST00000584755 ITGB8P26012 769 aa14.81□□□□□ -0.04
UBBP4-202ENST00000584755 PDCLQ13371 301 aa14.81□□□□□ -0.04
UBBP4-202ENST00000584755 IKBKEQ14164 716 aa14.81□□□□□ -0.04
UBBP4-202ENST00000584755 GOLGA7BQ2TAP0 167 aa14.81□□□□□ -0.04
UBBP4-202ENST00000584755 C2CD6Q53TS8 623 aa14.81□□□□□ -0.04
UBBP4-202ENST00000584755 PPP1R15BQ5SWA1 713 aa14.81□□□□□ -0.04
UBBP4-202ENST00000584755 LLGL2Q6P1M3 1020 aa14.81□□□□□ -0.04
UBBP4-202ENST00000584755 PEX26Q7Z412 305 aa14.81□□□□□ -0.04
UBBP4-202ENST00000584755 ABI1Q8IZP0 508 aa14.81□□□□□ -0.04
UBBP4-202ENST00000584755 ANKRD52Q8NB46 1076 aa14.81□□□□□ -0.04
UBBP4-202ENST00000584755 MSANTD4Q8NCY6 345 aa14.81□□□□□ -0.04
UBBP4-202ENST00000584755 STK32AQ8WU08 396 aa14.81□□□□□ -0.04
UBBP4-202ENST00000584755 HES6Q96HZ4 224 aa14.81□□□□□ -0.04
UBBP4-202ENST00000584755 CPXM1Q96SM3 734 aa14.81□□□□□ -0.04
UBBP4-202ENST00000584755 OSBPL9Q96SU4 736 aa14.81□□□□□ -0.04
UBBP4-202ENST00000584755 MRPL9Q9BYD2 267 aaKnown RBP14.81□□□□□ -0.04
UBBP4-202ENST00000584755 GOLPH3Q9H4A6 298 aa14.81□□□□□ -0.04
UBBP4-202ENST00000584755 WDR35Q9P2L0 1181 aa14.81□□□□□ -0.04
UBBP4-202ENST00000584755 LRFN2Q9ULH4 789 aa14.81□□□□□ -0.04
UBBP4-202ENST00000584755 CES2O00748 559 aa14.8□□□□□ -0.04
UBBP4-202ENST00000584755 ITGB1P05556 798 aa14.8□□□□□ -0.04
UBBP4-202ENST00000584755 PTPN1P18031 435 aaKnown RBP14.8□□□□□ -0.04
UBBP4-202ENST00000584755 BRCC3P46736 316 aa14.8□□□□□ -0.04
UBBP4-202ENST00000584755 RPL34P49207 117 aaKnown RBP14.8□□□□□ -0.04
UBBP4-202ENST00000584755 RNASELQ05823 741 aaKnown RBP14.8□□□□□ -0.04
UBBP4-202ENST00000584755 KIAA0319Q5VV43 1072 aa14.8□□□□□ -0.04
UBBP4-202ENST00000584755 MFSD5Q6N075 450 aa14.8□□□□□ -0.04
UBBP4-202ENST00000584755 C3orf20Q8ND61 904 aa14.8□□□□□ -0.04
UBBP4-202ENST00000584755 UBA3Q8TBC4 463 aa14.8□□□□□ -0.04
UBBP4-202ENST00000584755 SLC35F5Q8WV83 523 aa14.8□□□□□ -0.04
UBBP4-202ENST00000584755 C18orf8Q96DM3 657 aa14.8□□□□□ -0.04
UBBP4-202ENST00000584755 HNRNPABQ99729 332 aaKnown RBP14.8□□□□□ -0.04
UBBP4-202ENST00000584755 LPIN3Q9BQK8 851 aa14.8□□□□□ -0.04
UBBP4-202ENST00000584755 RTP3Q9BQQ7 232 aa14.8□□□□□ -0.04
UBBP4-202ENST00000584755 SLC4A5Q9BY07 1137 aa14.8□□□□□ -0.04
UBBP4-202ENST00000584755 NRDE2Q9H7Z3 1164 aa14.8□□□□□ -0.04
UBBP4-202ENST00000584755 FAM49BQ9NUQ9 324 aa14.8□□□□□ -0.04
UBBP4-202ENST00000584755 DDX43Q9NXZ2 648 aaKnown RBP14.8□□□□□ -0.04
UBBP4-202ENST00000584755 HESX1Q9UBX0 185 aa14.8□□□□□ -0.04
UBBP4-202ENST00000584755 AMFRQ9UKV5 643 aa14.8□□□□□ -0.04
UBBP4-202ENST00000584755 CDH9Q9ULB4 789 aa14.8□□□□□ -0.04
UBBP4-202ENST00000584755 PCDHB8Q9UN66 801 aa14.8□□□□□ -0.04
UBBP4-202ENST00000584755 ALG6Q9Y672 507 aa14.8□□□□□ -0.04
UBBP4-202ENST00000584755 FNDC1Q4ZHG4 1894 aaPredicted RBP14.79□□□□□ -0.04
UBBP4-202ENST00000584755 COL4A6Q14031 1691 aa14.79□□□□□ -0.04
UBBP4-202ENST00000584755 ABHD14A-ACY1A0A1B0GW23 586 aa14.79□□□□□ -0.04
UBBP4-202ENST00000584755 CTIFO43310 598 aaKnown RBP14.79□□□□□ -0.04
UBBP4-202ENST00000584755 CCDC130P13994 396 aa14.79□□□□□ -0.04
UBBP4-202ENST00000584755 GATMP50440 423 aa14.79□□□□□ -0.04
UBBP4-202ENST00000584755 BCAT1P54687 386 aa14.79□□□□□ -0.04
UBBP4-202ENST00000584755 TAP1Q03518 808 aa14.79□□□□□ -0.04
UBBP4-202ENST00000584755 ZNF268Q14587 947 aaPredicted RBP14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms