RNA–Protein interactions for RNA: ENST00000584472.5

CSNK1D-223, Transcript of casein kinase 1 delta, humanhuman

TSL 4

Gene CSNK1D, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-223ENST00000584472 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.09■□□□□ 0.335e-7■■■■■ 34.9
CSNK1D-223ENST00000584472 SIK3Q9Y2K2 1263 aa17.09■□□□□ 0.33
CSNK1D-223ENST00000584472 NR2E1Q9Y466 385 aa17.09■□□□□ 0.33
CSNK1D-223ENST00000584472 A0A1W2PQC6 194 aa17.08■□□□□ 0.32
CSNK1D-223ENST00000584472 WDR27A2RRH5 827 aa17.08■□□□□ 0.32
CSNK1D-223ENST00000584472 HUS1O60921 280 aa17.08■□□□□ 0.32
CSNK1D-223ENST00000584472 ZMYND10O75800 440 aa17.08■□□□□ 0.32
CSNK1D-223ENST00000584472 TPM3P06753 285 aa17.08■□□□□ 0.32
CSNK1D-223ENST00000584472 HNRNPA1P09651 372 aaKnown RBP eCLIP17.08■□□□□ 0.32
CSNK1D-223ENST00000584472 PLA2G5P39877 138 aa17.08■□□□□ 0.32
CSNK1D-223ENST00000584472 PBX1P40424 430 aa17.08■□□□□ 0.32
CSNK1D-223ENST00000584472 KLK7P49862 253 aa17.08■□□□□ 0.32
CSNK1D-223ENST00000584472 NOP14P78316 857 aaKnown RBP17.08■□□□□ 0.32
CSNK1D-223ENST00000584472 PTPN21Q16825 1174 aa17.08■□□□□ 0.32
CSNK1D-223ENST00000584472 WDR72Q3MJ13 1102 aa17.08■□□□□ 0.32
CSNK1D-223ENST00000584472 ZNF667Q5HYK9 610 aa17.08■□□□□ 0.32
CSNK1D-223ENST00000584472 WDR44Q5JSH3 913 aa17.08■□□□□ 0.32
CSNK1D-223ENST00000584472 TMC5Q6UXY8 1006 aa17.08■□□□□ 0.32
CSNK1D-223ENST00000584472 CCDC149Q6ZUS6 474 aa17.08■□□□□ 0.32
CSNK1D-223ENST00000584472 TMEM86AQ8N2M4 240 aa17.08■□□□□ 0.32
CSNK1D-223ENST00000584472 TOP6BLQ8N6T0 577 aa17.08■□□□□ 0.32
CSNK1D-223ENST00000584472 C12orf76Q8N812 135 aaPredicted RBP17.08■□□□□ 0.32
CSNK1D-223ENST00000584472 TATDN2Q93075 761 aa17.08■□□□□ 0.32
CSNK1D-223ENST00000584472 NT5C1BQ96P26 610 aa17.08■□□□□ 0.32
CSNK1D-223ENST00000584472 APOL5Q9BWW9 433 aa17.08■□□□□ 0.32
CSNK1D-223ENST00000584472 TRIM5Q9C035 493 aa17.08■□□□□ 0.32
CSNK1D-223ENST00000584472 SIX2Q9NPC8 291 aa17.08■□□□□ 0.32
CSNK1D-223ENST00000584472 MUTYHQ9UIF7 546 aa17.08■□□□□ 0.32
CSNK1D-223ENST00000584472 USTQ9Y2C2 406 aa17.08■□□□□ 0.32
CSNK1D-223ENST00000584472 CLSTN1O94985 981 aa17.07■□□□□ 0.32
CSNK1D-223ENST00000584472 POU2F2P09086 479 aa17.07■□□□□ 0.32
CSNK1D-223ENST00000584472 CPB1P15086 417 aa17.07■□□□□ 0.32
CSNK1D-223ENST00000584472 ATF2P15336 505 aa17.07■□□□□ 0.32
CSNK1D-223ENST00000584472 LRMPQ12912 555 aa17.07■□□□□ 0.32
CSNK1D-223ENST00000584472 ATAT1Q5SQI0 421 aa17.07■□□□□ 0.32
CSNK1D-223ENST00000584472 WSCD1Q658N2 575 aa17.07■□□□□ 0.32
CSNK1D-223ENST00000584472 PHLDB3Q6NSJ2 640 aa17.07■□□□□ 0.32
CSNK1D-223ENST00000584472 DPH6Q7L8W6 267 aa17.07■□□□□ 0.32
CSNK1D-223ENST00000584472 LIMS2Q7Z4I7 341 aa17.07■□□□□ 0.32
CSNK1D-223ENST00000584472 TCEAL8Q8IYN2 117 aa17.07■□□□□ 0.32
CSNK1D-223ENST00000584472 THEM5Q8N1Q8 247 aa17.07■□□□□ 0.32
CSNK1D-223ENST00000584472 PDCL2Q8N4E4 241 aa17.07■□□□□ 0.32
CSNK1D-223ENST00000584472 FAXDC2Q96IV6 333 aa17.07■□□□□ 0.32
CSNK1D-223ENST00000584472 LSM14BQ9BX40 385 aaKnown RBP17.07■□□□□ 0.32
CSNK1D-223ENST00000584472 PLCB1Q9NQ66 1216 aa17.07■□□□□ 0.32
CSNK1D-223ENST00000584472 NXF1Q9UBU9 619 aaKnown RBP17.07■□□□□ 0.32
CSNK1D-223ENST00000584472 APEX2Q9UBZ4 518 aa17.07■□□□□ 0.32
CSNK1D-223ENST00000584472 AFF4Q9UHB7 1163 aaKnown RBP17.07■□□□□ 0.32
CSNK1D-223ENST00000584472 POLIQ9UNA4 740 aa17.07■□□□□ 0.32
CSNK1D-223ENST00000584472 SNX9Q9Y5X1 595 aa17.07■□□□□ 0.32
CSNK1D-223ENST00000584472 C2orf16Q68DN1 1984 aa17.06■□□□□ 0.32
CSNK1D-223ENST00000584472 DENND4AQ7Z401 1863 aa17.06■□□□□ 0.32
CSNK1D-223ENST00000584472 CCDC195A0A1B0GUA6 201 aa17.06■□□□□ 0.32
CSNK1D-223ENST00000584472 FAM86C2PA6NEL3 165 aa17.06■□□□□ 0.32
CSNK1D-223ENST00000584472 RFPL2O75678 378 aa17.06■□□□□ 0.32
CSNK1D-223ENST00000584472 C8AP07357 584 aa17.06■□□□□ 0.32
CSNK1D-223ENST00000584472 ZNF75DP51815 510 aa17.06■□□□□ 0.32
CSNK1D-223ENST00000584472 TNNC1P63316 161 aa17.06■□□□□ 0.32
CSNK1D-223ENST00000584472 APBA1Q02410 837 aa17.06■□□□□ 0.32
CSNK1D-223ENST00000584472 GPR17Q13304 367 aa17.06■□□□□ 0.32
CSNK1D-223ENST00000584472 ARHGEF19Q8IW93 802 aa17.06■□□□□ 0.32
CSNK1D-223ENST00000584472 SLC7A14Q8TBB6 771 aa17.06■□□□□ 0.32
CSNK1D-223ENST00000584472 ZNF707Q96C28 371 aaPredicted RBP17.06■□□□□ 0.32
CSNK1D-223ENST00000584472 PCMTD1Q96MG8 357 aaPredicted RBP17.06■□□□□ 0.32
CSNK1D-223ENST00000584472 PRKD2Q9BZL6 878 aa17.06■□□□□ 0.32
CSNK1D-223ENST00000584472 NIF3L1Q9GZT8 377 aa17.06■□□□□ 0.32
CSNK1D-223ENST00000584472 L1RE1Q9UN81 338 aa17.06■□□□□ 0.32
CSNK1D-223ENST00000584472 PRRG1O14668 218 aa17.05■□□□□ 0.32
CSNK1D-223ENST00000584472 NOL4O94818 638 aa17.05■□□□□ 0.32
CSNK1D-223ENST00000584472 FAM163BP0C2L3 166 aa17.05■□□□□ 0.32
CSNK1D-223ENST00000584472 P4HA1P13674 534 aa17.05■□□□□ 0.32
CSNK1D-223ENST00000584472 ELF1P32519 619 aa17.05■□□□□ 0.32
CSNK1D-223ENST00000584472 ASPAP45381 313 aa17.05■□□□□ 0.32
CSNK1D-223ENST00000584472 LHX1P48742 406 aa17.05■□□□□ 0.32
CSNK1D-223ENST00000584472 ARPP19P56211 112 aa17.05■□□□□ 0.32
CSNK1D-223ENST00000584472 SOWAHAQ2M3V2 549 aa17.05■□□□□ 0.32
CSNK1D-223ENST00000584472 PPM1LQ5SGD2 360 aa17.05■□□□□ 0.32
CSNK1D-223ENST00000584472 KLHDC7AQ5VTJ3 777 aa17.05■□□□□ 0.32
CSNK1D-223ENST00000584472 GJB7Q6PEY0 223 aa17.05■□□□□ 0.32
CSNK1D-223ENST00000584472 ADGRF2Q8IZF7 708 aa17.05■□□□□ 0.32
CSNK1D-223ENST00000584472 PPM1KQ8N3J5 372 aa17.05■□□□□ 0.32
CSNK1D-223ENST00000584472 OR10T2Q8NGX3 314 aa17.05■□□□□ 0.32
CSNK1D-223ENST00000584472 SMG7Q92540 1137 aaKnown RBP17.05■□□□□ 0.32
CSNK1D-223ENST00000584472 MRFAP1L1Q96HT8 127 aa17.05■□□□□ 0.32
CSNK1D-223ENST00000584472 RPGRIP1Q96KN7 1286 aa17.05■□□□□ 0.32
CSNK1D-223ENST00000584472 MMS19Q96T76 1030 aa17.05■□□□□ 0.32
CSNK1D-223ENST00000584472 RTP3Q9BQQ7 232 aa17.05■□□□□ 0.32
CSNK1D-223ENST00000584472 BCO2Q9BYV7 579 aa17.05■□□□□ 0.32
CSNK1D-223ENST00000584472 ZCWPW1Q9H0M4 648 aa17.05■□□□□ 0.32
CSNK1D-223ENST00000584472 HSFX1Q9UBD0 423 aa17.05■□□□□ 0.32
CSNK1D-223ENST00000584472 TECTAO75443 2155 aa17.05■□□□□ 0.32
CSNK1D-223ENST00000584472 ITIH6Q6UXX5 1313 aa17.04■□□□□ 0.32
CSNK1D-223ENST00000584472 GABRDO14764 452 aa17.04■□□□□ 0.32
CSNK1D-223ENST00000584472 XYLBO75191 536 aa17.04■□□□□ 0.32
CSNK1D-223ENST00000584472 TBXAS1P24557 533 aaPredicted RBP17.04■□□□□ 0.32
CSNK1D-223ENST00000584472 PCSK1P29120 753 aa17.04■□□□□ 0.32
CSNK1D-223ENST00000584472 MRE11P49959 708 aa17.04■□□□□ 0.32
CSNK1D-223ENST00000584472 ZXDAP98168 799 aa17.04■□□□□ 0.32
CSNK1D-223ENST00000584472 GCNT1Q02742 428 aa17.04■□□□□ 0.32
CSNK1D-223ENST00000584472 ADCY1Q08828 1119 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms