RNA–Protein interactions for RNA: ENST00000584063.5

CDK5RAP3-231, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,759 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-231ENST00000584063 ZNF317Q96PQ6 595 aaPredicted RBP12.23□□□□□ -0.45
CDK5RAP3-231ENST00000584063 NUP85Q9BW27 656 aa12.23□□□□□ -0.45
CDK5RAP3-231ENST00000584063 KLHL11Q9NVR0 708 aa12.23□□□□□ -0.45
CDK5RAP3-231ENST00000584063 ASIC3Q9UHC3 531 aa12.23□□□□□ -0.45
CDK5RAP3-231ENST00000584063 ENO4A6NNW6 628 aa12.22□□□□□ -0.45
CDK5RAP3-231ENST00000584063 PIP5K1CO60331 668 aa12.22□□□□□ -0.45
CDK5RAP3-231ENST00000584063 KLHL41O60662 606 aa12.22□□□□□ -0.45
CDK5RAP3-231ENST00000584063 UBOX5O94941 541 aa12.22□□□□□ -0.45
CDK5RAP3-231ENST00000584063 RTN3O95197 1032 aaPredicted RBP12.22□□□□□ -0.45
CDK5RAP3-231ENST00000584063 GJB6O95452 261 aa12.22□□□□□ -0.45
CDK5RAP3-231ENST00000584063 CYP2C8P10632 490 aa12.22□□□□□ -0.45
CDK5RAP3-231ENST00000584063 XKR9Q5GH70 373 aa12.22□□□□□ -0.45
CDK5RAP3-231ENST00000584063 FAM47EQ6ZV65 393 aa12.22□□□□□ -0.45
CDK5RAP3-231ENST00000584063 BTN2A1Q7KYR7 527 aa12.22□□□□□ -0.45
CDK5RAP3-231ENST00000584063 JPH3Q8WXH2 748 aaPredicted RBP12.22□□□□□ -0.45
CDK5RAP3-231ENST00000584063 ZNF653Q96CK0 615 aa12.22□□□□□ -0.45
CDK5RAP3-231ENST00000584063 SLC10A4Q96EP9 437 aa12.22□□□□□ -0.45
CDK5RAP3-231ENST00000584063 HERPUD2Q9BSE4 406 aa12.22□□□□□ -0.45
CDK5RAP3-231ENST00000584063 CHST7Q9NS84 486 aa12.22□□□□□ -0.45
CDK5RAP3-231ENST00000584063 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.22□□□□□ -0.45
CDK5RAP3-231ENST00000584063 NCANO14594 1321 aa12.22□□□□□ -0.45
CDK5RAP3-231ENST00000584063 CES2O00748 559 aa12.22□□□□□ -0.45
CDK5RAP3-231ENST00000584063 CCND2P30279 289 aa12.22□□□□□ -0.45
CDK5RAP3-231ENST00000584063 WNT7BP56706 349 aa12.22□□□□□ -0.45
CDK5RAP3-231ENST00000584063 ELF3P78545 371 aaPredicted RBP12.22□□□□□ -0.45
CDK5RAP3-231ENST00000584063 TSPY1Q01534 308 aa12.22□□□□□ -0.45
CDK5RAP3-231ENST00000584063 ZBTB17Q13105 803 aa12.22□□□□□ -0.45
CDK5RAP3-231ENST00000584063 NUGGCQ68CJ6 796 aa12.22□□□□□ -0.45
CDK5RAP3-231ENST00000584063 ERAP2Q6P179 960 aa12.22□□□□□ -0.45
CDK5RAP3-231ENST00000584063 ERO1BQ86YB8 467 aa12.22□□□□□ -0.45
CDK5RAP3-231ENST00000584063 FAM81AQ8TBF8 368 aa12.22□□□□□ -0.45
CDK5RAP3-231ENST00000584063 TAS1R2Q8TE23 839 aa12.22□□□□□ -0.45
CDK5RAP3-231ENST00000584063 TXLNGYQ9BZA5 131 aa12.22□□□□□ -0.45
CDK5RAP3-231ENST00000584063 ASCC2Q9H1I8 757 aaPredicted RBP12.22□□□□□ -0.45
CDK5RAP3-231ENST00000584063 CARD9Q9H257 536 aa12.22□□□□□ -0.45
CDK5RAP3-231ENST00000584063 SYNCQ9H7C4 482 aa12.22□□□□□ -0.45
CDK5RAP3-231ENST00000584063 CUEDC1Q9NWM3 386 aaPredicted RBP12.22□□□□□ -0.45
CDK5RAP3-231ENST00000584063 SAMD15Q9P1V8 674 aa12.22□□□□□ -0.45
CDK5RAP3-231ENST00000584063 SQORQ9Y6N5 450 aa12.22□□□□□ -0.45
CDK5RAP3-231ENST00000584063 P4HBP07237 508 aaKnown RBP12.21□□□□□ -0.45
CDK5RAP3-231ENST00000584063 MYO1EQ12965 1108 aa12.21□□□□□ -0.45
CDK5RAP3-231ENST00000584063 AUHQ13825 339 aaKnown RBP12.21□□□□□ -0.45
CDK5RAP3-231ENST00000584063 SEL1L2Q5TEA6 688 aa12.21□□□□□ -0.45
CDK5RAP3-231ENST00000584063 SWSAP1Q6NVH7 229 aa12.21□□□□□ -0.45
CDK5RAP3-231ENST00000584063 USP50Q70EL3 339 aaPredicted RBP12.21□□□□□ -0.45
CDK5RAP3-231ENST00000584063 EXOC3L1Q86VI1 746 aa12.21□□□□□ -0.45
CDK5RAP3-231ENST00000584063 CCDC63Q8NA47 563 aa12.21□□□□□ -0.45
CDK5RAP3-231ENST00000584063 TEX19Q8NA77 164 aa12.21□□□□□ -0.45
CDK5RAP3-231ENST00000584063 REPS2Q8NFH8 660 aa12.21□□□□□ -0.45
CDK5RAP3-231ENST00000584063 SPATA17Q96L03 361 aa12.21□□□□□ -0.45
CDK5RAP3-231ENST00000584063 RIT2Q99578 217 aa12.21□□□□□ -0.45
CDK5RAP3-231ENST00000584063 ZSWIM1Q9BR11 485 aa12.21□□□□□ -0.45
CDK5RAP3-231ENST00000584063 MKNK1Q9BUB5 465 aa12.21□□□□□ -0.45
CDK5RAP3-231ENST00000584063 ARNT2Q9HBZ2 717 aa12.21□□□□□ -0.45
CDK5RAP3-231ENST00000584063 UBIAD1Q9Y5Z9 338 aa12.21□□□□□ -0.45
CDK5RAP3-231ENST00000584063 ADGRA3Q8IWK6 1321 aa12.21□□□□□ -0.45
CDK5RAP3-231ENST00000584063 DICER1Q9UPY3 1922 aaKnown RBP12.21□□□□□ -0.45
CDK5RAP3-231ENST00000584063 A0A0A6YYK5 440 aaPredicted RBP12.21□□□□□ -0.46
CDK5RAP3-231ENST00000584063 RIPK2O43353 540 aa12.21□□□□□ -0.46
CDK5RAP3-231ENST00000584063 PHF2O75151 1096 aa12.21□□□□□ -0.46
CDK5RAP3-231ENST00000584063 QARSP47897 775 aaKnown RBP12.21□□□□□ -0.46
CDK5RAP3-231ENST00000584063 MXI1P50539 228 aa12.21□□□□□ -0.46
CDK5RAP3-231ENST00000584063 MPP2Q14168 576 aa12.21□□□□□ -0.46
CDK5RAP3-231ENST00000584063 KIF22Q14807 665 aa12.21□□□□□ -0.46
CDK5RAP3-231ENST00000584063 SLC39A4Q6P5W5 647 aa12.21□□□□□ -0.46
CDK5RAP3-231ENST00000584063 CYFIP1Q7L576 1253 aa12.21□□□□□ -0.46
CDK5RAP3-231ENST00000584063 VSIG10LQ86VR7 867 aa12.21□□□□□ -0.46
CDK5RAP3-231ENST00000584063 CYP4X1Q8N118 509 aa12.21□□□□□ -0.46
CDK5RAP3-231ENST00000584063 UBL4BQ8N7F7 174 aa12.21□□□□□ -0.46
CDK5RAP3-231ENST00000584063 EPS8L1Q8TE68 723 aa12.21□□□□□ -0.46
CDK5RAP3-231ENST00000584063 PGBD4Q96DM1 585 aa12.21□□□□□ -0.46
CDK5RAP3-231ENST00000584063 C9orf72Q96LT7 481 aa12.21□□□□□ -0.46
CDK5RAP3-231ENST00000584063 TINF2Q9BSI4 451 aa12.21□□□□□ -0.46
CDK5RAP3-231ENST00000584063 CDC42EP4Q9H3Q1 356 aaKnown RBP12.21□□□□□ -0.46
CDK5RAP3-231ENST00000584063 NOD2Q9HC29 1040 aa12.21□□□□□ -0.46
CDK5RAP3-231ENST00000584063 SEPT10Q9P0V9 454 aa12.21□□□□□ -0.46
CDK5RAP3-231ENST00000584063 RIMKLBQ9ULI2 386 aa12.21□□□□□ -0.46
CDK5RAP3-231ENST00000584063 PRKAB1Q9Y478 270 aa12.21□□□□□ -0.46
CDK5RAP3-231ENST00000584063 PFASO15067 1338 aa12.21□□□□□ -0.46
CDK5RAP3-231ENST00000584063 TMEM120BA0PK00 339 aa12.2□□□□□ -0.46
CDK5RAP3-231ENST00000584063 MYL3P08590 195 aa12.2□□□□□ -0.46
CDK5RAP3-231ENST00000584063 CFHP08603 1231 aa12.2□□□□□ -0.46
CDK5RAP3-231ENST00000584063 KRT10P13645 584 aa12.2□□□□□ -0.46
CDK5RAP3-231ENST00000584063 KRT5P13647 590 aa12.2□□□□□ -0.46
CDK5RAP3-231ENST00000584063 PLS3P13797 630 aa12.2□□□□□ -0.46
CDK5RAP3-231ENST00000584063 RNASELQ05823 741 aaKnown RBP12.2□□□□□ -0.46
CDK5RAP3-231ENST00000584063 ARMC4Q5T2S8 1044 aa12.2□□□□□ -0.46
CDK5RAP3-231ENST00000584063 CYP4F22Q6NT55 531 aa12.2□□□□□ -0.46
CDK5RAP3-231ENST00000584063 ANO5Q75V66 913 aa12.2□□□□□ -0.46
CDK5RAP3-231ENST00000584063 XXYLT1Q8NBI6 393 aa12.2□□□□□ -0.46
CDK5RAP3-231ENST00000584063 ZNF564Q8TBZ8 553 aaPredicted RBP12.2□□□□□ -0.46
CDK5RAP3-231ENST00000584063 SEC14L1Q92503 715 aa12.2□□□□□ -0.46
CDK5RAP3-231ENST00000584063 ARHGEF2Q92974 986 aaKnown RBP12.2□□□□□ -0.46
CDK5RAP3-231ENST00000584063 C12orf42Q96LP6 360 aa12.2□□□□□ -0.46
CDK5RAP3-231ENST00000584063 TXNRD2Q9NNW7 524 aa12.2□□□□□ -0.46
CDK5RAP3-231ENST00000584063 LARSQ9P2J5 1176 aaKnown RBP12.2□□□□□ -0.46
CDK5RAP3-231ENST00000584063 RASAL2Q9UJF2 1139 aa12.2□□□□□ -0.46
CDK5RAP3-231ENST00000584063 RTCAO00442 366 aaKnown RBP12.2□□□□□ -0.46
CDK5RAP3-231ENST00000584063 FDX1P10109 184 aa12.2□□□□□ -0.46
CDK5RAP3-231ENST00000584063 MMP13P45452 471 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms