RNA–Protein interactions for RNA: ENST00000584042.1

CDK5RAP3-230, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 638 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-230ENST00000584042 TOGARAM2Q6ZUX3 1019 aa17.76■□□□□ 0.43
CDK5RAP3-230ENST00000584042 ANKS3Q6ZW76 656 aa17.76■□□□□ 0.43
CDK5RAP3-230ENST00000584042 PALB2Q86YC2 1186 aa17.76■□□□□ 0.43
CDK5RAP3-230ENST00000584042 GPR65Q8IYL9 337 aa17.76■□□□□ 0.43
CDK5RAP3-230ENST00000584042 OR10T2Q8NGX3 314 aa17.76■□□□□ 0.43
CDK5RAP3-230ENST00000584042 PIK3R5Q8WYR1 880 aa17.76■□□□□ 0.43
CDK5RAP3-230ENST00000584042 PKMYT1Q99640 499 aa17.76■□□□□ 0.43
CDK5RAP3-230ENST00000584042 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.76■□□□□ 0.431e-6■□□□□ 8
CDK5RAP3-230ENST00000584042 PLVAPQ9BX97 442 aa17.76■□□□□ 0.43
CDK5RAP3-230ENST00000584042 LUC7LQ9NQ29 371 aaKnown RBP17.76■□□□□ 0.43
CDK5RAP3-230ENST00000584042 CRTAC1Q9NQ79 661 aa17.76■□□□□ 0.43
CDK5RAP3-230ENST00000584042 SEPT11Q9NVA2 429 aaKnown RBP17.76■□□□□ 0.43
CDK5RAP3-230ENST00000584042 NAGPAQ9UK23 515 aa17.76■□□□□ 0.43
CDK5RAP3-230ENST00000584042 TSPAN16Q9UKR8 245 aa17.76■□□□□ 0.43
CDK5RAP3-230ENST00000584042 CEP83Q9Y592 693 aa17.76■□□□□ 0.43
CDK5RAP3-230ENST00000584042 PATJQ8NI35 1801 aa17.75■□□□□ 0.43
CDK5RAP3-230ENST00000584042 H7C4K7 107 aa17.75■□□□□ 0.43
CDK5RAP3-230ENST00000584042 CAPN15O75808 1086 aa17.75■□□□□ 0.43
CDK5RAP3-230ENST00000584042 PDGFRBP09619 1106 aa17.75■□□□□ 0.43
CDK5RAP3-230ENST00000584042 CCDC175P0C221 793 aa17.75■□□□□ 0.43
CDK5RAP3-230ENST00000584042 PTPN1P18031 435 aaKnown RBP17.75■□□□□ 0.43
CDK5RAP3-230ENST00000584042 GLUD2P49448 558 aa17.75■□□□□ 0.43
CDK5RAP3-230ENST00000584042 NOMO3P69849 1222 aa17.75■□□□□ 0.43
CDK5RAP3-230ENST00000584042 KRT83P78385 493 aa17.75■□□□□ 0.43
CDK5RAP3-230ENST00000584042 CENPCQ03188 943 aa17.75■□□□□ 0.43
CDK5RAP3-230ENST00000584042 MAPRE1Q15691 268 aaKnown RBP17.75■□□□□ 0.43
CDK5RAP3-230ENST00000584042 CNGA2Q16280 664 aa17.75■□□□□ 0.43
CDK5RAP3-230ENST00000584042 CLEC16AQ2KHT3 1053 aa17.75■□□□□ 0.43
CDK5RAP3-230ENST00000584042 C10orf76Q5T2E6 689 aa17.75■□□□□ 0.43
CDK5RAP3-230ENST00000584042 KIAA0319Q5VV43 1072 aa17.75■□□□□ 0.43
CDK5RAP3-230ENST00000584042 FAM109BQ6ICB4 259 aaPredicted RBP17.75■□□□□ 0.43
CDK5RAP3-230ENST00000584042 ACRBPQ8NEB7 543 aa17.75■□□□□ 0.43
CDK5RAP3-230ENST00000584042 MYCBPAPQ8TBZ2 947 aa17.75■□□□□ 0.43
CDK5RAP3-230ENST00000584042 SAMD11Q96NU1 681 aa17.75■□□□□ 0.43
CDK5RAP3-230ENST00000584042 PCDHB18PQ96TA0 734 aa17.75■□□□□ 0.43
CDK5RAP3-230ENST00000584042 DESI2Q9BSY9 194 aa17.75■□□□□ 0.43
CDK5RAP3-230ENST00000584042 ZNF518BQ9C0D4 1074 aa17.75■□□□□ 0.43
CDK5RAP3-230ENST00000584042 LHX5Q9H2C1 402 aa17.75■□□□□ 0.43
CDK5RAP3-230ENST00000584042 PDCL3Q9H2J4 239 aa17.75■□□□□ 0.43
CDK5RAP3-230ENST00000584042 CHST7Q9NS84 486 aa17.75■□□□□ 0.43
CDK5RAP3-230ENST00000584042 FAM49BQ9NUQ9 324 aa17.75■□□□□ 0.43
CDK5RAP3-230ENST00000584042 REXO2Q9Y3B8 237 aaKnown RBP17.75■□□□□ 0.43
CDK5RAP3-230ENST00000584042 ADGRG1Q9Y653 693 aa17.75■□□□□ 0.43
CDK5RAP3-230ENST00000584042 C5orf67F2Z3F1 127 aa17.74■□□□□ 0.43
CDK5RAP3-230ENST00000584042 M0QYV0 167 aa17.74■□□□□ 0.43
CDK5RAP3-230ENST00000584042 ZNF263O14978 683 aa17.74■□□□□ 0.43
CDK5RAP3-230ENST00000584042 TBC1D4O60343 1298 aa17.74■□□□□ 0.43
CDK5RAP3-230ENST00000584042 FGF18O76093 207 aa17.74■□□□□ 0.43
CDK5RAP3-230ENST00000584042 MICAL2O94851 1124 aa17.74■□□□□ 0.43
CDK5RAP3-230ENST00000584042 URODP06132 367 aa17.74■□□□□ 0.43
CDK5RAP3-230ENST00000584042 UNGP13051 313 aaPredicted RBP17.74■□□□□ 0.43
CDK5RAP3-230ENST00000584042 CTNNB1P35222 781 aa17.74■□□□□ 0.43
CDK5RAP3-230ENST00000584042 RABGGTBP53611 331 aa17.74■□□□□ 0.43
CDK5RAP3-230ENST00000584042 DSG1Q02413 1049 aa17.74■□□□□ 0.43
CDK5RAP3-230ENST00000584042 GOLGA7BQ2TAP0 167 aa17.74■□□□□ 0.43
CDK5RAP3-230ENST00000584042 CTXN3Q4LDR2 81 aa17.74■□□□□ 0.43
CDK5RAP3-230ENST00000584042 MDH1BQ5I0G3 518 aa17.74■□□□□ 0.43
CDK5RAP3-230ENST00000584042 PPP1R26Q5T8A7 1209 aaPredicted RBP17.74■□□□□ 0.43
CDK5RAP3-230ENST00000584042 ALKBH5Q6P6C2 394 aaKnown RBP17.74■□□□□ 0.43
CDK5RAP3-230ENST00000584042 FAM171BQ6P995 826 aa17.74■□□□□ 0.43
CDK5RAP3-230ENST00000584042 TXLNBQ8N3L3 684 aa17.74■□□□□ 0.43
CDK5RAP3-230ENST00000584042 C12orf29Q8N999 325 aa17.74■□□□□ 0.43
CDK5RAP3-230ENST00000584042 TMEM35BQ8NCS4 154 aa17.74■□□□□ 0.43
CDK5RAP3-230ENST00000584042 HNRNPABQ99729 332 aaKnown RBP17.74■□□□□ 0.43
CDK5RAP3-230ENST00000584042 ZCWPW1Q9H0M4 648 aa17.74■□□□□ 0.43
CDK5RAP3-230ENST00000584042 MTRRQ9UBK8 725 aa17.74■□□□□ 0.43
CDK5RAP3-230ENST00000584042 LZTS1Q9Y250 596 aa17.74■□□□□ 0.43
CDK5RAP3-230ENST00000584042 BACE2Q9Y5Z0 518 aa17.74■□□□□ 0.43
CDK5RAP3-230ENST00000584042 CCP110O43303 1012 aa17.73■□□□□ 0.43
CDK5RAP3-230ENST00000584042 SETSIPP0DME0 302 aa17.73■□□□□ 0.43
CDK5RAP3-230ENST00000584042 CCDC130P13994 396 aa17.73■□□□□ 0.43
CDK5RAP3-230ENST00000584042 BMPR1AP36894 532 aa17.73■□□□□ 0.43
CDK5RAP3-230ENST00000584042 VAV2P52735 878 aa17.73■□□□□ 0.43
CDK5RAP3-230ENST00000584042 BCAT1P54687 386 aa17.73■□□□□ 0.43
CDK5RAP3-230ENST00000584042 KRT17Q04695 432 aa17.73■□□□□ 0.43
CDK5RAP3-230ENST00000584042 RAB30Q15771 203 aa17.73■□□□□ 0.43
CDK5RAP3-230ENST00000584042 PSMD5Q16401 504 aa17.73■□□□□ 0.43
CDK5RAP3-230ENST00000584042 CCDC122Q5T0U0 273 aa17.73■□□□□ 0.43
CDK5RAP3-230ENST00000584042 CEP57Q86XR8 500 aa17.73■□□□□ 0.43
CDK5RAP3-230ENST00000584042 DCP1BQ8IZD4 617 aaKnown RBP17.73■□□□□ 0.43
CDK5RAP3-230ENST00000584042 FUKQ8N0W3 1084 aa17.73■□□□□ 0.43
CDK5RAP3-230ENST00000584042 SLC2A14Q8TDB8 520 aa17.73■□□□□ 0.43
CDK5RAP3-230ENST00000584042 MYLPFQ96A32 169 aa17.73■□□□□ 0.43
CDK5RAP3-230ENST00000584042 CYFIP2Q96F07 1278 aa17.73■□□□□ 0.43
CDK5RAP3-230ENST00000584042 ZBP1Q9H171 429 aa17.73■□□□□ 0.43
CDK5RAP3-230ENST00000584042 KCND1Q9NSA2 647 aa17.73■□□□□ 0.43
CDK5RAP3-230ENST00000584042 HESX1Q9UBX0 185 aa17.73■□□□□ 0.43
CDK5RAP3-230ENST00000584042 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.72■□□□□ 0.43
CDK5RAP3-230ENST00000584042 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.72■□□□□ 0.43
CDK5RAP3-230ENST00000584042 MYBPHLA2RUH7 354 aa17.72■□□□□ 0.43
CDK5RAP3-230ENST00000584042 GRXCR1A8MXD5 290 aa17.72■□□□□ 0.43
CDK5RAP3-230ENST00000584042 ATP2C2O75185 946 aa17.72■□□□□ 0.43
CDK5RAP3-230ENST00000584042 RTN2O75298 545 aa17.72■□□□□ 0.43
CDK5RAP3-230ENST00000584042 RB1P06400 928 aa17.72■□□□□ 0.43
CDK5RAP3-230ENST00000584042 CA3P07451 260 aa17.72■□□□□ 0.43
CDK5RAP3-230ENST00000584042 CFHP08603 1231 aa17.72■□□□□ 0.43
CDK5RAP3-230ENST00000584042 CYP27A1Q02318 531 aa17.72■□□□□ 0.43
CDK5RAP3-230ENST00000584042 CREMQ03060 361 aa17.72■□□□□ 0.43
CDK5RAP3-230ENST00000584042 UBE3AQ05086 875 aa17.72■□□□□ 0.43
CDK5RAP3-230ENST00000584042 BST2Q10589 180 aaKnown RBP17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms