RNA–Protein interactions for RNA: ENST00000583902.1

CASC3-209, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 557 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-209ENST00000583902 TCTN1Q2MV58 587 aa9.78□□□□□ -0.84
CASC3-209ENST00000583902 USP41Q3LFD5 358 aa9.78□□□□□ -0.84
CASC3-209ENST00000583902 ARHGAP29Q52LW3 1261 aa9.78□□□□□ -0.84
CASC3-209ENST00000583902 E4F1Q66K89 784 aaPredicted RBP9.78□□□□□ -0.84
CASC3-209ENST00000583902 ACAD10Q6JQN1 1059 aa9.78□□□□□ -0.84
CASC3-209ENST00000583902 ZNF280DQ6N043 979 aa9.78□□□□□ -0.84
CASC3-209ENST00000583902 FUT10Q6P4F1 479 aa9.78□□□□□ -0.84
CASC3-209ENST00000583902 KCNT2Q6UVM3 1135 aa9.78□□□□□ -0.84
CASC3-209ENST00000583902 CD300LGQ6UXG3 332 aa9.78□□□□□ -0.84
CASC3-209ENST00000583902 RAD9BQ6WBX8 426 aa9.78□□□□□ -0.84
CASC3-209ENST00000583902 RTL10Q7L3V2 364 aa9.78□□□□□ -0.84
CASC3-209ENST00000583902 KIAA1328Q86T90 577 aa9.78□□□□□ -0.84
CASC3-209ENST00000583902 DDX53Q86TM3 631 aaKnown RBP9.78□□□□□ -0.84
CASC3-209ENST00000583902 NOP9Q86U38 636 aaKnown RBP9.78□□□□□ -0.84
CASC3-209ENST00000583902 PHF13Q86YI8 300 aaPredicted RBP9.78□□□□□ -0.84
CASC3-209ENST00000583902 HERC6Q8IVU3 1022 aa9.78□□□□□ -0.84
CASC3-209ENST00000583902 RHOT2Q8IXI1 618 aa9.78□□□□□ -0.84
CASC3-209ENST00000583902 CCAR2Q8N163 923 aaKnown RBP9.78□□□□□ -0.84
CASC3-209ENST00000583902 ANKRD52Q8NB46 1076 aa9.78□□□□□ -0.84
CASC3-209ENST00000583902 B3GALNT2Q8NCR0 500 aa9.78□□□□□ -0.84
CASC3-209ENST00000583902 MYCBPAPQ8TBZ2 947 aa9.78□□□□□ -0.84
CASC3-209ENST00000583902 WHAMMQ8TF30 809 aa9.78□□□□□ -0.84
CASC3-209ENST00000583902 KBTBD7Q8WVZ9 684 aa9.78□□□□□ -0.84
CASC3-209ENST00000583902 IGSF21Q96ID5 467 aa9.78□□□□□ -0.84
CASC3-209ENST00000583902 HSFY1Q96LI6 401 aa9.78□□□□□ -0.84
CASC3-209ENST00000583902 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.78□□□□□ -0.845e-9■□□□□ 9.8
CASC3-209ENST00000583902 ZBED2Q9BTP6 218 aa9.78□□□□□ -0.84
CASC3-209ENST00000583902 TTPALQ9BTX7 342 aa9.78□□□□□ -0.84
CASC3-209ENST00000583902 CXCL16Q9H2A7 254 aa9.78□□□□□ -0.84
CASC3-209ENST00000583902 ABCB6Q9NP58 842 aa9.78□□□□□ -0.84
CASC3-209ENST00000583902 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.78□□□□□ -0.84
CASC3-209ENST00000583902 DDX43Q9NXZ2 648 aaKnown RBP9.78□□□□□ -0.84
CASC3-209ENST00000583902 PUF60Q9UHX1 559 aaKnown RBP9.78□□□□□ -0.84
CASC3-209ENST00000583902 AJAP1Q9UKB5 411 aaPredicted RBP9.78□□□□□ -0.84
CASC3-209ENST00000583902 NENFQ9UMX5 172 aa9.78□□□□□ -0.84
CASC3-209ENST00000583902 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.78□□□□□ -0.84
CASC3-209ENST00000583902 PCDHA13Q9Y5I0 950 aa9.78□□□□□ -0.84
CASC3-209ENST00000583902 BACE2Q9Y5Z0 518 aa9.78□□□□□ -0.84
CASC3-209ENST00000583902 MYH10P35580 1976 aa9.77□□□□□ -0.84
CASC3-209ENST00000583902 TSC2P49815 1807 aa9.77□□□□□ -0.84
CASC3-209ENST00000583902 A0A087X0T9 212 aa9.77□□□□□ -0.85
CASC3-209ENST00000583902 ESPNB1AK53 854 aa9.77□□□□□ -0.85
CASC3-209ENST00000583902 O00370 1275 aa9.77□□□□□ -0.85
CASC3-209ENST00000583902 DDX3XO00571 662 aaKnown RBP eCLIP9.77□□□□□ -0.85
CASC3-209ENST00000583902 PPEF2O14830 753 aa9.77□□□□□ -0.85
CASC3-209ENST00000583902 ZNF500O60304 480 aaPredicted RBP9.77□□□□□ -0.85
CASC3-209ENST00000583902 UPP2O95045 317 aa9.77□□□□□ -0.85
CASC3-209ENST00000583902 EFEMP2O95967 443 aa9.77□□□□□ -0.85
CASC3-209ENST00000583902 SOD2P04179 222 aa9.77□□□□□ -0.85
CASC3-209ENST00000583902 FAM228BP0C875 321 aa9.77□□□□□ -0.85
CASC3-209ENST00000583902 UNGP13051 313 aaPredicted RBP9.77□□□□□ -0.85
CASC3-209ENST00000583902 CD19P15391 556 aa9.77□□□□□ -0.85
CASC3-209ENST00000583902 PTPN1P18031 435 aaKnown RBP9.77□□□□□ -0.85
CASC3-209ENST00000583902 SCNN1AP37088 669 aa9.77□□□□□ -0.85
CASC3-209ENST00000583902 SLC11A1P49279 550 aa9.77□□□□□ -0.85
CASC3-209ENST00000583902 BCAT1P54687 386 aa9.77□□□□□ -0.85
CASC3-209ENST00000583902 CDH8P55286 799 aa9.77□□□□□ -0.85
CASC3-209ENST00000583902 DEFB103AP81534 67 aa9.77□□□□□ -0.85
CASC3-209ENST00000583902 GOLGA8FQ08AF8 430 aa9.77□□□□□ -0.85
CASC3-209ENST00000583902 GOLGA8DPQ0D2H9 430 aa9.77□□□□□ -0.85
CASC3-209ENST00000583902 MRPL58Q14197 206 aaKnown RBP9.77□□□□□ -0.85
CASC3-209ENST00000583902 CLEC16AQ2KHT3 1053 aa9.77□□□□□ -0.85
CASC3-209ENST00000583902 INTS6LQ5JSJ4 861 aaKnown RBP9.77□□□□□ -0.85
CASC3-209ENST00000583902 CCDC122Q5T0U0 273 aa9.77□□□□□ -0.85
CASC3-209ENST00000583902 SPOUT1Q5T280 376 aaKnown RBP9.77□□□□□ -0.85
CASC3-209ENST00000583902 LIN9Q5TKA1 542 aa9.77□□□□□ -0.85
CASC3-209ENST00000583902 WSCD1Q658N2 575 aa9.77□□□□□ -0.85
CASC3-209ENST00000583902 PDE12Q6L8Q7 609 aaKnown RBP9.77□□□□□ -0.85
CASC3-209ENST00000583902 FAM171BQ6P995 826 aa9.77□□□□□ -0.85
CASC3-209ENST00000583902 SCARA5Q6ZMJ2 495 aa9.77□□□□□ -0.85
CASC3-209ENST00000583902 GLYCTKQ8IVS8 523 aa9.77□□□□□ -0.85
CASC3-209ENST00000583902 RNF168Q8IYW5 571 aaPredicted RBP9.77□□□□□ -0.85
CASC3-209ENST00000583902 SLC39A11Q8N1S5 342 aa9.77□□□□□ -0.85
CASC3-209ENST00000583902 C3orf58Q8NDZ4 430 aa9.77□□□□□ -0.85
CASC3-209ENST00000583902 CTNNBL1Q8WYA6 563 aaPredicted RBP9.77□□□□□ -0.85
CASC3-209ENST00000583902 CYFIP2Q96F07 1278 aa9.77□□□□□ -0.85
CASC3-209ENST00000583902 NCAPGQ9BPX3 1015 aa9.77□□□□□ -0.85
CASC3-209ENST00000583902 SYT15Q9BQS2 421 aa9.77□□□□□ -0.85
CASC3-209ENST00000583902 MRPL45Q9BRJ2 306 aaKnown RBP9.77□□□□□ -0.85
CASC3-209ENST00000583902 HERC2P3Q9BVR0 1158 aa9.77□□□□□ -0.85
CASC3-209ENST00000583902 ELOVL4Q9GZR5 314 aa9.77□□□□□ -0.85
CASC3-209ENST00000583902 SDCBP2Q9H190 292 aa9.77□□□□□ -0.85
CASC3-209ENST00000583902 MRPL47Q9HD33 250 aaKnown RBP9.77□□□□□ -0.85
CASC3-209ENST00000583902 AVENQ9NQS1 362 aaPredicted RBP9.77□□□□□ -0.85
CASC3-209ENST00000583902 UVRAGQ9P2Y5 699 aa9.77□□□□□ -0.85
CASC3-209ENST00000583902 SCINQ9Y6U3 715 aa9.77□□□□□ -0.85
CASC3-209ENST00000583902 PTPRSQ13332 1948 aa9.76□□□□□ -0.85
CASC3-209ENST00000583902 C5orf67F2Z3F1 127 aa9.76□□□□□ -0.85
CASC3-209ENST00000583902 SART1O43290 800 aaKnown RBP9.76□□□□□ -0.85
CASC3-209ENST00000583902 TLL1O43897 1013 aa9.76□□□□□ -0.85
CASC3-209ENST00000583902 FTLP02792 175 aaPredicted RBP9.76□□□□□ -0.85
CASC3-209ENST00000583902 PLEKP08567 350 aaPredicted RBP9.76□□□□□ -0.85
CASC3-209ENST00000583902 DESP17661 470 aa9.76□□□□□ -0.85
CASC3-209ENST00000583902 CHRNB2P17787 502 aa9.76□□□□□ -0.85
CASC3-209ENST00000583902 MAGEA11P43364 429 aa9.76□□□□□ -0.85
CASC3-209ENST00000583902 RPL34P49207 117 aaKnown RBP9.76□□□□□ -0.85
CASC3-209ENST00000583902 HADHBP55084 474 aaKnown RBP9.76□□□□□ -0.85
CASC3-209ENST00000583902 GPC5P78333 572 aa9.76□□□□□ -0.85
CASC3-209ENST00000583902 GFPT1Q06210 699 aaPredicted RBP9.76□□□□□ -0.85
CASC3-209ENST00000583902 BST2Q10589 180 aaKnown RBP9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms