RNA–Protein interactions for RNA: ENST00000583634.1

TSEN54-210, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 2

Gene TSEN54, Length 282 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-210ENST00000583634 SCARA3Q6AZY7 606 aa12.98□□□□□ -0.33
TSEN54-210ENST00000583634 DCLRE1AQ6PJP8 1040 aa12.98□□□□□ -0.33
TSEN54-210ENST00000583634 CYP26C1Q6V0L0 522 aa12.98□□□□□ -0.33
TSEN54-210ENST00000583634 TMTC1Q8IUR5 882 aa12.98□□□□□ -0.33
TSEN54-210ENST00000583634 SLC39A11Q8N1S5 342 aa12.98□□□□□ -0.33
TSEN54-210ENST00000583634 C12orf76Q8N812 135 aaPredicted RBP12.98□□□□□ -0.33
TSEN54-210ENST00000583634 FEZF2Q8TBJ5 459 aa12.98□□□□□ -0.33
TSEN54-210ENST00000583634 SHC3Q92529 594 aa12.98□□□□□ -0.33
TSEN54-210ENST00000583634 CASP10Q92851 521 aa12.98□□□□□ -0.33
TSEN54-210ENST00000583634 KREMEN1Q96MU8 473 aa12.98□□□□□ -0.33
TSEN54-210ENST00000583634 BCO2Q9BYV7 579 aa12.98□□□□□ -0.33
TSEN54-210ENST00000583634 GOLGA2P5Q9HBQ8 144 aa12.98□□□□□ -0.33
TSEN54-210ENST00000583634 GDAP2Q9NXN4 497 aa12.98□□□□□ -0.33
TSEN54-210ENST00000583634 NXF1Q9UBU9 619 aaKnown RBP12.98□□□□□ -0.33
TSEN54-210ENST00000583634 AJAP1Q9UKB5 411 aaPredicted RBP12.98□□□□□ -0.33
TSEN54-210ENST00000583634 ARHGEF37A1IGU5 675 aa12.97□□□□□ -0.33
TSEN54-210ENST00000583634 CARNS1A5YM72 827 aa12.97□□□□□ -0.33
TSEN54-210ENST00000583634 CASTOR2A6NHX0 329 aa12.97□□□□□ -0.33
TSEN54-210ENST00000583634 KPNA7A9QM74 516 aa12.97□□□□□ -0.33
TSEN54-210ENST00000583634 FOXN3O00409 490 aaPredicted RBP12.97□□□□□ -0.33
TSEN54-210ENST00000583634 CXCL14O95715 111 aa12.97□□□□□ -0.33
TSEN54-210ENST00000583634 SERPING1P05155 500 aa12.97□□□□□ -0.33
TSEN54-210ENST00000583634 FECHP22830 423 aa12.97□□□□□ -0.33
TSEN54-210ENST00000583634 PPM1AP35813 382 aa12.97□□□□□ -0.33
TSEN54-210ENST00000583634 CLCNKBP51801 687 aa12.97□□□□□ -0.33
TSEN54-210ENST00000583634 BPIFB4P59827 614 aa12.97□□□□□ -0.33
TSEN54-210ENST00000583634 LILRA4P59901 499 aa12.97□□□□□ -0.33
TSEN54-210ENST00000583634 SMC1AQ14683 1233 aaKnown RBP12.97□□□□□ -0.33
TSEN54-210ENST00000583634 MEA1Q16626 185 aa12.97□□□□□ -0.33
TSEN54-210ENST00000583634 CES5AQ6NT32 575 aa12.97□□□□□ -0.33
TSEN54-210ENST00000583634 DPH6Q7L8W6 267 aa12.97□□□□□ -0.33
TSEN54-210ENST00000583634 COLGALT2Q8IYK4 626 aa12.97□□□□□ -0.33
TSEN54-210ENST00000583634 FAM71AQ8IYT1 594 aa12.97□□□□□ -0.33
TSEN54-210ENST00000583634 AUTS2Q8WXX7 1259 aa12.97□□□□□ -0.33
TSEN54-210ENST00000583634 KAT5Q92993 513 aa12.97□□□□□ -0.33
TSEN54-210ENST00000583634 MMS19Q96T76 1030 aa12.97□□□□□ -0.33
TSEN54-210ENST00000583634 BAG1Q99933 345 aaPredicted RBP12.97□□□□□ -0.33
TSEN54-210ENST00000583634 TMEM175Q9BSA9 504 aa12.97□□□□□ -0.33
TSEN54-210ENST00000583634 GPR88Q9GZN0 384 aa12.97□□□□□ -0.33
TSEN54-210ENST00000583634 DNAI2Q9GZS0 605 aa12.97□□□□□ -0.33
TSEN54-210ENST00000583634 ADAM7Q9H2U9 754 aa12.97□□□□□ -0.33
TSEN54-210ENST00000583634 NR2E1Q9Y466 385 aa12.97□□□□□ -0.33
TSEN54-210ENST00000583634 PCDHB4Q9Y5E5 795 aa12.97□□□□□ -0.33
TSEN54-210ENST00000583634 SNX9Q9Y5X1 595 aa12.97□□□□□ -0.33
TSEN54-210ENST00000583634 USP34Q70CQ2 3546 aa12.97□□□□□ -0.33
TSEN54-210ENST00000583634 PLXNA3P51805 1871 aa12.96□□□□□ -0.33
TSEN54-210ENST00000583634 TMEM189-UBE2V1I3L0A0 370 aa12.96□□□□□ -0.33
TSEN54-210ENST00000583634 PPEF2O14830 753 aa12.96□□□□□ -0.33
TSEN54-210ENST00000583634 HUS1O60921 280 aa12.96□□□□□ -0.33
TSEN54-210ENST00000583634 GFPT2O94808 682 aa12.96□□□□□ -0.33
TSEN54-210ENST00000583634 DDHD2O94830 711 aa12.96□□□□□ -0.33
TSEN54-210ENST00000583634 ALDH2P05091 517 aa12.96□□□□□ -0.33
TSEN54-210ENST00000583634 ASGR2P07307 311 aa12.96□□□□□ -0.33
TSEN54-210ENST00000583634 USP8P40818 1118 aa12.96□□□□□ -0.33
TSEN54-210ENST00000583634 PRKCIP41743 596 aa12.96□□□□□ -0.33
TSEN54-210ENST00000583634 ASPAP45381 313 aa12.96□□□□□ -0.33
TSEN54-210ENST00000583634 BCAR1P56945 870 aa12.96□□□□□ -0.33
TSEN54-210ENST00000583634 ITIH3Q06033 890 aa12.96□□□□□ -0.33
TSEN54-210ENST00000583634 KLHL30Q0D2K2 578 aa12.96□□□□□ -0.33
TSEN54-210ENST00000583634 MTMR3Q13615 1198 aa12.96□□□□□ -0.33
TSEN54-210ENST00000583634 RARS2Q5T160 578 aaKnown RBP12.96□□□□□ -0.33
TSEN54-210ENST00000583634 WDR59Q6PJI9 974 aa12.96□□□□□ -0.33
TSEN54-210ENST00000583634 IRF2BP2Q7Z5L9 587 aa12.96□□□□□ -0.33
TSEN54-210ENST00000583634 TMEM173Q86WV6 379 aaPredicted RBP12.96□□□□□ -0.33
TSEN54-210ENST00000583634 ZNF280BQ86YH2 543 aa12.96□□□□□ -0.33
TSEN54-210ENST00000583634 TMEM130Q8N3G9 435 aa12.96□□□□□ -0.33
TSEN54-210ENST00000583634 TOP6BLQ8N6T0 577 aa12.96□□□□□ -0.33
TSEN54-210ENST00000583634 TMEM105Q8N8V8 129 aa12.96□□□□□ -0.33
TSEN54-210ENST00000583634 ELMO3Q96BJ8 720 aa12.96□□□□□ -0.33
TSEN54-210ENST00000583634 COLEC11Q9BWP8 271 aa12.96□□□□□ -0.33
TSEN54-210ENST00000583634 NRDE2Q9H7Z3 1164 aa12.96□□□□□ -0.33
TSEN54-210ENST00000583634 POLIQ9UNA4 740 aa12.96□□□□□ -0.33
TSEN54-210ENST00000583634 SORCS3Q9UPU3 1222 aa12.96□□□□□ -0.33
TSEN54-210ENST00000583634 CNTN6Q9UQ52 1028 aa12.96□□□□□ -0.33
TSEN54-210ENST00000583634 ZFHX2Q9C0A1 2572 aaPredicted RBP12.96□□□□□ -0.34
TSEN54-210ENST00000583634 SSU72P8A0A1W2PR75 194 aa12.95□□□□□ -0.34
TSEN54-210ENST00000583634 ARHGAP6O43182 974 aa12.95□□□□□ -0.34
TSEN54-210ENST00000583634 GALR2O43603 387 aaPredicted RBP12.95□□□□□ -0.34
TSEN54-210ENST00000583634 TACC1O75410 805 aa12.95□□□□□ -0.34
TSEN54-210ENST00000583634 B3GAT3O94766 335 aa12.95□□□□□ -0.34
TSEN54-210ENST00000583634 SKILP12757 684 aa12.95□□□□□ -0.34
TSEN54-210ENST00000583634 KRT5P13647 590 aa12.95□□□□□ -0.34
TSEN54-210ENST00000583634 ACO1P21399 889 aaKnown RBP12.95□□□□□ -0.34
TSEN54-210ENST00000583634 ANXA13P27216 316 aa12.95□□□□□ -0.34
TSEN54-210ENST00000583634 OR1G1P47890 313 aa12.95□□□□□ -0.34
TSEN54-210ENST00000583634 ALDH7A1P49419 539 aaKnown RBP12.95□□□□□ -0.34
TSEN54-210ENST00000583634 ARID5AQ03989 594 aa12.95□□□□□ -0.34
TSEN54-210ENST00000583634 TMEM270Q6UE05 265 aa12.95□□□□□ -0.34
TSEN54-210ENST00000583634 DSTYKQ6XUX3 929 aa12.95□□□□□ -0.34
TSEN54-210ENST00000583634 SCARA5Q6ZMJ2 495 aa12.95□□□□□ -0.34
TSEN54-210ENST00000583634 VPS36Q86VN1 386 aa12.95□□□□□ -0.34
TSEN54-210ENST00000583634 CCDC170Q8IYT3 715 aa12.95□□□□□ -0.34
TSEN54-210ENST00000583634 VPS52Q8N1B4 723 aa12.95□□□□□ -0.34
TSEN54-210ENST00000583634 UBR7Q8N806 425 aa12.95□□□□□ -0.34
TSEN54-210ENST00000583634 APPL2Q8NEU8 664 aa12.95□□□□□ -0.34
TSEN54-210ENST00000583634 SPATA18Q8TC71 538 aa12.95□□□□□ -0.34
TSEN54-210ENST00000583634 NECTIN4Q96NY8 510 aa12.95□□□□□ -0.34
TSEN54-210ENST00000583634 ARID3AQ99856 593 aa12.95□□□□□ -0.34
TSEN54-210ENST00000583634 IRF2BPLQ9H1B7 796 aa12.95□□□□□ -0.34
TSEN54-210ENST00000583634 CISHQ9NSE2 258 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms