RNA–Protein interactions for RNA: ENST00000583463.5

SPECC1-220, Transcript of sperm antigen with calponin homology and coiled-coil domains 1, humanhuman

TSL 4

Gene SPECC1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPECC1-220ENST00000583463 MYO1EQ12965 1108 aa16.64■□□□□ 0.25
SPECC1-220ENST00000583463 PUM1Q14671 1186 aaKnown RBP eCLIP16.64■□□□□ 0.25
SPECC1-220ENST00000583463 UVSSAQ2YD98 709 aa16.64■□□□□ 0.25
SPECC1-220ENST00000583463 SV2CQ496J9 727 aa16.64■□□□□ 0.25
SPECC1-220ENST00000583463 DCLRE1AQ6PJP8 1040 aa16.64■□□□□ 0.25
SPECC1-220ENST00000583463 GBP6Q6ZN66 633 aa16.64■□□□□ 0.25
SPECC1-220ENST00000583463 GLYCTKQ8IVS8 523 aa16.64■□□□□ 0.25
SPECC1-220ENST00000583463 C3orf58Q8NDZ4 430 aa16.64■□□□□ 0.25
SPECC1-220ENST00000583463 RABGGTAQ92696 567 aa16.64■□□□□ 0.25
SPECC1-220ENST00000583463 TAF4BQ92750 862 aa16.64■□□□□ 0.25
SPECC1-220ENST00000583463 COLEC11Q9BWP8 271 aa16.64■□□□□ 0.25
SPECC1-220ENST00000583463 WDR6Q9NNW5 1121 aaKnown RBP16.64■□□□□ 0.25
SPECC1-220ENST00000583463 RAB20Q9NX57 234 aa16.64■□□□□ 0.25
SPECC1-220ENST00000583463 IGSF9Q9P2J2 1179 aa16.64■□□□□ 0.25
SPECC1-220ENST00000583463 CLUHO75153 1309 aa16.64■□□□□ 0.25
SPECC1-220ENST00000583463 TPRP12270 2363 aaKnown RBP16.63■□□□□ 0.25
SPECC1-220ENST00000583463 B3GAT3O94766 335 aa16.63■□□□□ 0.25
SPECC1-220ENST00000583463 CLSTN1O94985 981 aa16.63■□□□□ 0.25
SPECC1-220ENST00000583463 ASS1P00966 412 aaKnown RBP16.63■□□□□ 0.25
SPECC1-220ENST00000583463 BMS1Q14692 1282 aaKnown RBP16.63■□□□□ 0.25
SPECC1-220ENST00000583463 EXOC3L4Q17RC7 722 aa16.63■□□□□ 0.25
SPECC1-220ENST00000583463 SGSM1Q2NKQ1 1148 aa16.63■□□□□ 0.25
SPECC1-220ENST00000583463 ZNF699Q32M78 642 aa16.63■□□□□ 0.25
SPECC1-220ENST00000583463 SARM1Q6SZW1 724 aa16.63■□□□□ 0.25
SPECC1-220ENST00000583463 CCDC150Q8NCX0 1101 aa16.63■□□□□ 0.25
SPECC1-220ENST00000583463 SEMA4DQ92854 862 aa16.63■□□□□ 0.25
SPECC1-220ENST00000583463 HPDLQ96IR7 371 aa16.63■□□□□ 0.25
SPECC1-220ENST00000583463 INTS2Q9H0H0 1204 aaKnown RBP16.63■□□□□ 0.25
SPECC1-220ENST00000583463 XYLT2Q9H1B5 865 aa16.63■□□□□ 0.25
SPECC1-220ENST00000583463 VRTNQ9H8Y1 702 aa16.63■□□□□ 0.25
SPECC1-220ENST00000583463 RTN4Q9NQC3 1192 aaKnown RBP16.63■□□□□ 0.25
SPECC1-220ENST00000583463 ADAM28Q9UKQ2 775 aa16.63■□□□□ 0.25
SPECC1-220ENST00000583463 NUB1Q9Y5A7 615 aa16.63■□□□□ 0.25
SPECC1-220ENST00000583463 SCN1AP35498 2009 aa16.62■□□□□ 0.25
SPECC1-220ENST00000583463 CBFA2T2O43439 604 aa16.62■□□□□ 0.25
SPECC1-220ENST00000583463 CST3P01034 146 aaPredicted RBP16.62■□□□□ 0.25
SPECC1-220ENST00000583463 TPM3P06753 285 aa16.62■□□□□ 0.25
SPECC1-220ENST00000583463 SRFP11831 508 aa16.62■□□□□ 0.25
SPECC1-220ENST00000583463 RFX1P22670 979 aa16.62■□□□□ 0.25
SPECC1-220ENST00000583463 AARSP49588 968 aaKnown RBP eCLIP16.62■□□□□ 0.25
SPECC1-220ENST00000583463 UBASH3AP57075 661 aa16.62■□□□□ 0.25
SPECC1-220ENST00000583463 LILRA4P59901 499 aa16.62■□□□□ 0.25
SPECC1-220ENST00000583463 NOP14P78316 857 aaKnown RBP16.62■□□□□ 0.25
SPECC1-220ENST00000583463 NTHL1P78549 312 aa16.62■□□□□ 0.25
SPECC1-220ENST00000583463 UBXN1Q04323 297 aa16.62■□□□□ 0.25
SPECC1-220ENST00000583463 WDR44Q5JSH3 913 aa16.62■□□□□ 0.25
SPECC1-220ENST00000583463 SCARA3Q6AZY7 606 aa16.62■□□□□ 0.25
SPECC1-220ENST00000583463 GET4Q7L5D6 327 aaPredicted RBP16.62■□□□□ 0.25
SPECC1-220ENST00000583463 PPFIBP1Q86W92 1011 aa16.62■□□□□ 0.25
SPECC1-220ENST00000583463 PALB2Q86YC2 1186 aa16.62■□□□□ 0.25
SPECC1-220ENST00000583463 C1orf210Q8IVY1 113 aa16.62■□□□□ 0.25
SPECC1-220ENST00000583463 HASPINQ8TF76 798 aa16.62■□□□□ 0.25
SPECC1-220ENST00000583463 SMG7Q92540 1137 aaKnown RBP16.62■□□□□ 0.25
SPECC1-220ENST00000583463 RUBCNQ92622 972 aa16.62■□□□□ 0.25
SPECC1-220ENST00000583463 CRACR2AQ9BSW2 395 aa16.62■□□□□ 0.25
SPECC1-220ENST00000583463 EMILIN2Q9BXX0 1053 aa16.62■□□□□ 0.25
SPECC1-220ENST00000583463 ARHGEF3Q9NR81 526 aa16.62■□□□□ 0.25
SPECC1-220ENST00000583463 IFNKQ9P0W0 207 aa16.62■□□□□ 0.25
SPECC1-220ENST00000583463 EPS15L1Q9UBC2 864 aa16.62■□□□□ 0.25
SPECC1-220ENST00000583463 SIT1Q9Y3P8 196 aa16.62■□□□□ 0.25
SPECC1-220ENST00000583463 NUMBLQ9Y6R0 609 aa16.62■□□□□ 0.25
SPECC1-220ENST00000583463 SF3B1O75533 1304 aaKnown RBP eCLIP16.62■□□□□ 0.254e-7■■■■■ 83.5
SPECC1-220ENST00000583463 SPTLC1O15269 473 aa16.61■□□□□ 0.25
SPECC1-220ENST00000583463 TADA2AO75478 443 aa16.61■□□□□ 0.25
SPECC1-220ENST00000583463 RPL17P18621 184 aaKnown RBP16.61■□□□□ 0.25
SPECC1-220ENST00000583463 ELAVL2Q12926 359 aaKnown RBP16.61■□□□□ 0.25
SPECC1-220ENST00000583463 ZNF667Q5HYK9 610 aa16.61■□□□□ 0.25
SPECC1-220ENST00000583463 TRIM65Q6PJ69 517 aa16.61■□□□□ 0.25
SPECC1-220ENST00000583463 CD300LGQ6UXG3 332 aa16.61■□□□□ 0.25
SPECC1-220ENST00000583463 EHBP1Q8NDI1 1231 aa16.61■□□□□ 0.25
SPECC1-220ENST00000583463 LMO3Q8TAP4 145 aa16.61■□□□□ 0.25
SPECC1-220ENST00000583463 NAP1L5Q96NT1 182 aaPredicted RBP16.61■□□□□ 0.25
SPECC1-220ENST00000583463 NT5C1BQ96P26 610 aa16.61■□□□□ 0.25
SPECC1-220ENST00000583463 ERGIC2Q96RQ1 377 aa16.61■□□□□ 0.25
SPECC1-220ENST00000583463 PI4K2AQ9BTU6 479 aa16.61■□□□□ 0.25
SPECC1-220ENST00000583463 MRPL17Q9NRX2 175 aaKnown RBP16.61■□□□□ 0.25
SPECC1-220ENST00000583463 EPG5Q9HCE0 2579 aa16.61■□□□□ 0.25
SPECC1-220ENST00000583463 ARHGEF37A1IGU5 675 aa16.6■□□□□ 0.25
SPECC1-220ENST00000583463 GOLGA6L3A6NEY3 463 aa16.6■□□□□ 0.25
SPECC1-220ENST00000583463 KPNA7A9QM74 516 aa16.6■□□□□ 0.25
SPECC1-220ENST00000583463 TRAPPC3O43617 180 aa16.6■□□□□ 0.25
SPECC1-220ENST00000583463 EFEMP2O95967 443 aa16.6■□□□□ 0.25
SPECC1-220ENST00000583463 P4HA1P13674 534 aa16.6■□□□□ 0.25
SPECC1-220ENST00000583463 CD72P21854 359 aa16.6■□□□□ 0.25
SPECC1-220ENST00000583463 TNNC1P63316 161 aa16.6■□□□□ 0.25
SPECC1-220ENST00000583463 GPC5P78333 572 aa16.6■□□□□ 0.25
SPECC1-220ENST00000583463 PLCB2Q00722 1185 aa16.6■□□□□ 0.25
SPECC1-220ENST00000583463 HTR4Q13639 388 aa16.6■□□□□ 0.25
SPECC1-220ENST00000583463 NR1I3Q14994 352 aa16.6■□□□□ 0.25
SPECC1-220ENST00000583463 SYCP1Q15431 976 aa16.6■□□□□ 0.25
SPECC1-220ENST00000583463 KIAA0319Q5VV43 1072 aa16.6■□□□□ 0.25
SPECC1-220ENST00000583463 FUT10Q6P4F1 479 aa16.6■□□□□ 0.25
SPECC1-220ENST00000583463 CMASQ8NFW8 434 aaPredicted RBP16.6■□□□□ 0.25
SPECC1-220ENST00000583463 PJA1Q8NG27 643 aa16.6■□□□□ 0.25
SPECC1-220ENST00000583463 FGF14Q92915 247 aa16.6■□□□□ 0.25
SPECC1-220ENST00000583463 SUSD3Q96L08 255 aa16.6■□□□□ 0.25
SPECC1-220ENST00000583463 HERC2P3Q9BVR0 1158 aa16.6■□□□□ 0.25
SPECC1-220ENST00000583463 XPO4Q9C0E2 1151 aaKnown RBP16.6■□□□□ 0.25
SPECC1-220ENST00000583463 NIF3L1Q9GZT8 377 aa16.6■□□□□ 0.25
SPECC1-220ENST00000583463 GDAP2Q9NXN4 497 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms