RNA–Protein interactions for RNA: ENST00000583438.1

PPP4R1-225, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-225ENST00000583438 TSSK4Q6SA08 328 aa8.72□□□□□ -1.01
PPP4R1-225ENST00000583438 PIK3AP1Q6ZUJ8 805 aa8.72□□□□□ -1.01
PPP4R1-225ENST00000583438 LNX1Q8TBB1 728 aaPredicted RBP8.72□□□□□ -1.01
PPP4R1-225ENST00000583438 PIGOQ8TEQ8 1089 aa8.72□□□□□ -1.01
PPP4R1-225ENST00000583438 ING5Q8WYH8 240 aa8.72□□□□□ -1.01
PPP4R1-225ENST00000583438 FGF13Q92913 245 aa8.72□□□□□ -1.01
PPP4R1-225ENST00000583438 EIF2AK1Q9BQI3 630 aaKnown RBP8.72□□□□□ -1.01
PPP4R1-225ENST00000583438 TMEM60Q9H2L4 133 aa8.72□□□□□ -1.01
PPP4R1-225ENST00000583438 PARD6AQ9NPB6 346 aa8.72□□□□□ -1.01
PPP4R1-225ENST00000583438 IGSF5Q9NSI5 407 aa8.72□□□□□ -1.01
PPP4R1-225ENST00000583438 DLL3Q9NYJ7 618 aa8.72□□□□□ -1.01
PPP4R1-225ENST00000583438 ADAM28Q9UKQ2 775 aa8.72□□□□□ -1.01
PPP4R1-225ENST00000583438 TPCN1Q9ULQ1 816 aa8.72□□□□□ -1.01
PPP4R1-225ENST00000583438 CHD6Q8TD26 2715 aa8.71□□□□□ -1.01
PPP4R1-225ENST00000583438 LAMA1P25391 3075 aa8.71□□□□□ -1.01
PPP4R1-225ENST00000583438 SDK1Q7Z5N4 2213 aa8.71□□□□□ -1.02
PPP4R1-225ENST00000583438 FAM181BA6NEQ2 426 aa8.71□□□□□ -1.02
PPP4R1-225ENST00000583438 I3L4J1 428 aa8.71□□□□□ -1.02
PPP4R1-225ENST00000583438 INO80B-WBP1J3KQ70 363 aa8.71□□□□□ -1.02
PPP4R1-225ENST00000583438 CCL16O15467 120 aa8.71□□□□□ -1.02
PPP4R1-225ENST00000583438 GAS2O43903 313 aaKnown RBP8.71□□□□□ -1.02
PPP4R1-225ENST00000583438 CCNT1O60563 726 aaKnown RBP8.71□□□□□ -1.02
PPP4R1-225ENST00000583438 TDGF1P13385 188 aa8.71□□□□□ -1.02
PPP4R1-225ENST00000583438 BMP6P22004 513 aa8.71□□□□□ -1.02
PPP4R1-225ENST00000583438 FCARP24071 287 aa8.71□□□□□ -1.02
PPP4R1-225ENST00000583438 CCR2P41597 374 aa8.71□□□□□ -1.02
PPP4R1-225ENST00000583438 RARRES1P49788 294 aa8.71□□□□□ -1.02
PPP4R1-225ENST00000583438 NLRP12P59046 1061 aa8.71□□□□□ -1.02
PPP4R1-225ENST00000583438 AKAP17AQ02040 695 aaKnown RBP8.71□□□□□ -1.02
PPP4R1-225ENST00000583438 SOX4Q06945 474 aaPredicted RBP8.71□□□□□ -1.02
PPP4R1-225ENST00000583438 CDCA2Q69YH5 1023 aaPredicted RBP8.71□□□□□ -1.02
PPP4R1-225ENST00000583438 PPP4R3AQ6IN85 833 aa8.71□□□□□ -1.02
PPP4R1-225ENST00000583438 NOTUMQ6P988 496 aa8.71□□□□□ -1.02
PPP4R1-225ENST00000583438 DCLRE1AQ6PJP8 1040 aa8.71□□□□□ -1.02
PPP4R1-225ENST00000583438 CENPQQ7L2Z9 268 aaPredicted RBP8.71□□□□□ -1.02
PPP4R1-225ENST00000583438 MAEAQ7L5Y9 396 aa8.71□□□□□ -1.02
PPP4R1-225ENST00000583438 NEK8Q86SG6 692 aa8.71□□□□□ -1.02
PPP4R1-225ENST00000583438 C1orf210Q8IVY1 113 aa8.71□□□□□ -1.02
PPP4R1-225ENST00000583438 NELL1Q92832 810 aa8.71□□□□□ -1.02
PPP4R1-225ENST00000583438 KIFC3Q9BVG8 833 aa8.71□□□□□ -1.02
PPP4R1-225ENST00000583438 INO80BQ9C086 356 aaPredicted RBP8.71□□□□□ -1.02
PPP4R1-225ENST00000583438 CCDC113Q9H0I3 377 aa8.71□□□□□ -1.02
PPP4R1-225ENST00000583438 POLR3FQ9H1D9 316 aaPredicted RBP8.71□□□□□ -1.02
PPP4R1-225ENST00000583438 PDZD7Q9H5P4 517 aa8.71□□□□□ -1.02
PPP4R1-225ENST00000583438 GOLGA2P5Q9HBQ8 144 aa8.71□□□□□ -1.02
PPP4R1-225ENST00000583438 C2orf42Q9NWW7 574 aa8.71□□□□□ -1.02
PPP4R1-225ENST00000583438 FNIP2Q9P278 1114 aa8.71□□□□□ -1.02
PPP4R1-225ENST00000583438 DNMT3BQ9UBC3 853 aaKnown RBP8.71□□□□□ -1.02
PPP4R1-225ENST00000583438 STK17AQ9UEE5 414 aa8.71□□□□□ -1.02
PPP4R1-225ENST00000583438 GIT1Q9Y2X7 761 aa8.71□□□□□ -1.02
PPP4R1-225ENST00000583438 SIT1Q9Y3P8 196 aa8.71□□□□□ -1.02
PPP4R1-225ENST00000583438 SCN1AP35498 2009 aa8.71□□□□□ -1.02
PPP4R1-225ENST00000583438 PTPRDP23468 1912 aa8.7□□□□□ -1.02
PPP4R1-225ENST00000583438 WDFY3Q8IZQ1 3526 aa8.7□□□□□ -1.02
PPP4R1-225ENST00000583438 A0A1B0GUA9 196 aa8.7□□□□□ -1.02
PPP4R1-225ENST00000583438 USO1O60763 962 aaKnown RBP8.7□□□□□ -1.02
PPP4R1-225ENST00000583438 MED24O75448 989 aa8.7□□□□□ -1.02
PPP4R1-225ENST00000583438 RECQL4O94761 1208 aa8.7□□□□□ -1.02
PPP4R1-225ENST00000583438 ERLIN2O94905 339 aa8.7□□□□□ -1.02
PPP4R1-225ENST00000583438 LYPLA2O95372 231 aa8.7□□□□□ -1.02
PPP4R1-225ENST00000583438 ECEL1O95672 775 aa8.7□□□□□ -1.02
PPP4R1-225ENST00000583438 C8AP07357 584 aa8.7□□□□□ -1.02
PPP4R1-225ENST00000583438 CTSBP07858 339 aa8.7□□□□□ -1.02
PPP4R1-225ENST00000583438 CDC42EP1Q00587 391 aa8.7□□□□□ -1.02
PPP4R1-225ENST00000583438 GRIK3Q13003 919 aa8.7□□□□□ -1.02
PPP4R1-225ENST00000583438 HSP90AA2PQ14568 343 aaPredicted RBP8.7□□□□□ -1.02
PPP4R1-225ENST00000583438 PRRT3Q5FWE3 981 aa8.7□□□□□ -1.02
PPP4R1-225ENST00000583438 GLRA4Q5JXX5 417 aa8.7□□□□□ -1.02
PPP4R1-225ENST00000583438 TPH2Q8IWU9 490 aa8.7□□□□□ -1.02
PPP4R1-225ENST00000583438 NECAB1Q8N987 351 aa8.7□□□□□ -1.02
PPP4R1-225ENST00000583438 RSPH1Q8WYR4 309 aa8.7□□□□□ -1.02
PPP4R1-225ENST00000583438 TCEAL4Q96EI5 215 aa8.7□□□□□ -1.02
PPP4R1-225ENST00000583438 ZNF274Q96GC6 653 aaPredicted RBP8.7□□□□□ -1.02
PPP4R1-225ENST00000583438 FAM20AQ96MK3 541 aa8.7□□□□□ -1.02
PPP4R1-225ENST00000583438 FAM193BQ96PV7 902 aaPredicted RBP8.7□□□□□ -1.02
PPP4R1-225ENST00000583438 MTMR9Q96QG7 549 aa8.7□□□□□ -1.02
PPP4R1-225ENST00000583438 METTL5Q9NRN9 209 aaKnown RBP8.7□□□□□ -1.02
PPP4R1-225ENST00000583438 ZDHHC7Q9NXF8 308 aa8.7□□□□□ -1.02
PPP4R1-225ENST00000583438 SNTG2Q9NY99 539 aa8.7□□□□□ -1.02
PPP4R1-225ENST00000583438 CDH7Q9ULB5 785 aa8.7□□□□□ -1.02
PPP4R1-225ENST00000583438 CNOT1A5YKK6 2376 aaKnown RBP8.7□□□□□ -1.02
PPP4R1-225ENST00000583438 TCHHQ07283 1943 aa8.7□□□□□ -1.02
PPP4R1-225ENST00000583438 ZNF638Q14966 1978 aaKnown RBP8.7□□□□□ -1.02
PPP4R1-225ENST00000583438 ASPMQ8IZT6 3477 aa8.69□□□□□ -1.02
PPP4R1-225ENST00000583438 JAK2O60674 1132 aa8.69□□□□□ -1.02
PPP4R1-225ENST00000583438 MOSPD3O75425 235 aa8.69□□□□□ -1.02
PPP4R1-225ENST00000583438 WISP1O95388 367 aa8.69□□□□□ -1.02
PPP4R1-225ENST00000583438 VNN2O95498 520 aa8.69□□□□□ -1.02
PPP4R1-225ENST00000583438 TCF3P15923 654 aa8.69□□□□□ -1.02
PPP4R1-225ENST00000583438 CEBPBP17676 345 aa8.69□□□□□ -1.02
PPP4R1-225ENST00000583438 NME2P22392 152 aa8.69□□□□□ -1.02
PPP4R1-225ENST00000583438 TKTP29401 623 aaKnown RBP8.69□□□□□ -1.02
PPP4R1-225ENST00000583438 BRCC3P46736 316 aa8.69□□□□□ -1.02
PPP4R1-225ENST00000583438 DMWDQ09019 674 aa8.69□□□□□ -1.02
PPP4R1-225ENST00000583438 MLF2Q15773 248 aaPredicted RBP8.69□□□□□ -1.02
PPP4R1-225ENST00000583438 PSMD5Q16401 504 aa8.69□□□□□ -1.02
PPP4R1-225ENST00000583438 RSPO4Q2I0M5 234 aaPredicted RBP8.69□□□□□ -1.02
PPP4R1-225ENST00000583438 USP41Q3LFD5 358 aa8.69□□□□□ -1.02
PPP4R1-225ENST00000583438 FAM171A1Q5VUB5 890 aa8.69□□□□□ -1.02
PPP4R1-225ENST00000583438 SLC27A1Q6PCB7 646 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms