RNA–Protein interactions for RNA: ENST00000583344.1

SMCHD1-208, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 738 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-208ENST00000583344 PROSER3Q2NL68 480 aa5.26□□□□□ -1.57
SMCHD1-208ENST00000583344 CEP85Q6P2H3 762 aa5.26□□□□□ -1.57
SMCHD1-208ENST00000583344 TMEM108Q6UXF1 575 aa5.26□□□□□ -1.57
SMCHD1-208ENST00000583344 MAVSQ7Z434 540 aa5.26□□□□□ -1.57
SMCHD1-208ENST00000583344 MIER2Q8N344 545 aa5.26□□□□□ -1.57
SMCHD1-208ENST00000583344 PRPF38AQ8NAV1 312 aaKnown RBP5.26□□□□□ -1.57
SMCHD1-208ENST00000583344 FAM46DQ8NEK8 389 aa5.26□□□□□ -1.57
SMCHD1-208ENST00000583344 RGMAQ96B86 450 aa5.26□□□□□ -1.57
SMCHD1-208ENST00000583344 SMAD5Q99717 465 aaKnown RBP5.26□□□□□ -1.57
SMCHD1-208ENST00000583344 SH2D3AQ9BRG2 576 aa5.26□□□□□ -1.57
SMCHD1-208ENST00000583344 FEZ2Q9UHY8 353 aaPredicted RBP5.26□□□□□ -1.57
SMCHD1-208ENST00000583344 POLHQ9Y253 713 aa5.26□□□□□ -1.57
SMCHD1-208ENST00000583344 SMARCA4P51532 1647 aa5.26□□□□□ -1.57
SMCHD1-208ENST00000583344 TISP43B9A030 160 aa5.25□□□□□ -1.57
SMCHD1-208ENST00000583344 FTH1P19P0C7X4 201 aa5.25□□□□□ -1.57
SMCHD1-208ENST00000583344 LIPAP38571 399 aa5.25□□□□□ -1.57
SMCHD1-208ENST00000583344 SP2Q02086 613 aa5.25□□□□□ -1.57
SMCHD1-208ENST00000583344 ZNF618Q5T7W0 954 aa5.25□□□□□ -1.57
SMCHD1-208ENST00000583344 SLC29A4Q7RTT9 530 aa5.25□□□□□ -1.57
SMCHD1-208ENST00000583344 YTHDF3Q7Z739 585 aaKnown RBP5.25□□□□□ -1.57
SMCHD1-208ENST00000583344 PPP1R3BQ86XI6 285 aa5.25□□□□□ -1.57
SMCHD1-208ENST00000583344 SLC13A1Q9BZW2 595 aa5.25□□□□□ -1.57
SMCHD1-208ENST00000583344 SIK2Q9H0K1 926 aa5.25□□□□□ -1.57
SMCHD1-208ENST00000583344 MRPL46Q9H2W6 279 aaKnown RBP5.25□□□□□ -1.57
SMCHD1-208ENST00000583344 WDCPQ9H6R7 721 aa5.25□□□□□ -1.57
SMCHD1-208ENST00000583344 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.25□□□□□ -1.57
SMCHD1-208ENST00000583344 ZDHHC8Q9ULC8 765 aa5.25□□□□□ -1.57
SMCHD1-208ENST00000583344 SOGA1O94964 1423 aa5.24□□□□□ -1.57
SMCHD1-208ENST00000583344 JTBO76095 146 aa5.24□□□□□ -1.57
SMCHD1-208ENST00000583344 ARIH2O95376 493 aa5.24□□□□□ -1.57
SMCHD1-208ENST00000583344 FTLP02792 175 aaPredicted RBP5.24□□□□□ -1.57
SMCHD1-208ENST00000583344 GNAI2P04899 355 aa5.24□□□□□ -1.57
SMCHD1-208ENST00000583344 FAM163BP0C2L3 166 aa5.24□□□□□ -1.57
SMCHD1-208ENST00000583344 CYP2D6P10635 497 aa5.24□□□□□ -1.57
SMCHD1-208ENST00000583344 HK3P52790 923 aa5.24□□□□□ -1.57
SMCHD1-208ENST00000583344 AMPD3Q01432 767 aa5.24□□□□□ -1.57
SMCHD1-208ENST00000583344 SUPT20HL1Q3ZLR7 823 aa5.24□□□□□ -1.57
SMCHD1-208ENST00000583344 TEDDM1Q5T9Z0 273 aa5.24□□□□□ -1.57
SMCHD1-208ENST00000583344 PRAMEF17Q5VTA0 474 aa5.24□□□□□ -1.57
SMCHD1-208ENST00000583344 C11orf87Q6NUJ2 197 aa5.24□□□□□ -1.57
SMCHD1-208ENST00000583344 NEK8Q86SG6 692 aa5.24□□□□□ -1.57
SMCHD1-208ENST00000583344 FAM177A1Q8N128 213 aaPredicted RBP5.24□□□□□ -1.57
SMCHD1-208ENST00000583344 CPA6Q8N4T0 437 aa5.24□□□□□ -1.57
SMCHD1-208ENST00000583344 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.24□□□□□ -1.57
SMCHD1-208ENST00000583344 FANCBQ8NB91 859 aa5.24□□□□□ -1.57
SMCHD1-208ENST00000583344 SLC46A1Q96NT5 459 aa5.24□□□□□ -1.57
SMCHD1-208ENST00000583344 QTRT1Q9BXR0 403 aaKnown RBP5.24□□□□□ -1.57
SMCHD1-208ENST00000583344 TTYH3Q9C0H2 523 aa5.24□□□□□ -1.57
SMCHD1-208ENST00000583344 DLL3Q9NYJ7 618 aa5.24□□□□□ -1.57
SMCHD1-208ENST00000583344 SERTAD3Q9UJW9 196 aa5.24□□□□□ -1.57
SMCHD1-208ENST00000583344 CLSPNQ9HAW4 1339 aa5.23□□□□□ -1.57
SMCHD1-208ENST00000583344 PROB1E7EW31 1015 aa5.23□□□□□ -1.57
SMCHD1-208ENST00000583344 DCLK1O15075 740 aa5.23□□□□□ -1.57
SMCHD1-208ENST00000583344 PIM1P11309 404 aaPredicted RBP5.23□□□□□ -1.57
SMCHD1-208ENST00000583344 PDCP20941 246 aa5.23□□□□□ -1.57
SMCHD1-208ENST00000583344 CCND1P24385 295 aa5.23□□□□□ -1.57
SMCHD1-208ENST00000583344 CYP2C18P33260 490 aa5.23□□□□□ -1.57
SMCHD1-208ENST00000583344 ALDH9A1P49189 494 aa5.23□□□□□ -1.57
SMCHD1-208ENST00000583344 MAP2K6P52564 334 aa5.23□□□□□ -1.57
SMCHD1-208ENST00000583344 SLC44A4Q53GD3 710 aa5.23□□□□□ -1.57
SMCHD1-208ENST00000583344 CEP78Q5JTW2 689 aa5.23□□□□□ -1.57
SMCHD1-208ENST00000583344 TREML2Q5T2D2 321 aa5.23□□□□□ -1.57
SMCHD1-208ENST00000583344 RNF187Q5TA31 235 aaPredicted RBP5.23□□□□□ -1.57
SMCHD1-208ENST00000583344 FAM160B1Q5W0V3 765 aa5.23□□□□□ -1.57
SMCHD1-208ENST00000583344 ANKRD16Q6P6B7 361 aa5.23□□□□□ -1.57
SMCHD1-208ENST00000583344 TBC1D5Q92609 795 aa5.23□□□□□ -1.57
SMCHD1-208ENST00000583344 RPL36ALQ969Q0 106 aaKnown RBP5.23□□□□□ -1.57
SMCHD1-208ENST00000583344 MACROD1Q9BQ69 325 aa5.23□□□□□ -1.57
SMCHD1-208ENST00000583344 NRIP3Q9NQ35 241 aa5.23□□□□□ -1.57
SMCHD1-208ENST00000583344 LMBRD1Q9NUN5 540 aa5.23□□□□□ -1.57
SMCHD1-208ENST00000583344 HESX1Q9UBX0 185 aa5.23□□□□□ -1.57
SMCHD1-208ENST00000583344 PCDHA1Q9Y5I3 950 aa5.23□□□□□ -1.57
SMCHD1-208ENST00000583344 GOLGA3Q08378 1498 aa5.23□□□□□ -1.57
SMCHD1-208ENST00000583344 ABCC8Q09428 1581 aa5.22□□□□□ -1.57
SMCHD1-208ENST00000583344 QSOX1O00391 747 aa5.22□□□□□ -1.57
SMCHD1-208ENST00000583344 SLC16A6O15403 523 aa5.22□□□□□ -1.57
SMCHD1-208ENST00000583344 IL6RP08887 468 aaPredicted RBP5.22□□□□□ -1.57
SMCHD1-208ENST00000583344 TYRP14679 529 aa5.22□□□□□ -1.57
SMCHD1-208ENST00000583344 ENGP17813 658 aa5.22□□□□□ -1.57
SMCHD1-208ENST00000583344 EEFSECP57772 596 aaKnown RBP5.22□□□□□ -1.57
SMCHD1-208ENST00000583344 TUBA4AP68366 448 aa5.22□□□□□ -1.57
SMCHD1-208ENST00000583344 EXOSC9Q06265 439 aaKnown RBP5.22□□□□□ -1.57
SMCHD1-208ENST00000583344 AARS2Q5JTZ9 985 aaKnown RBP5.22□□□□□ -1.57
SMCHD1-208ENST00000583344 THEMIS2Q5TEJ8 643 aa5.22□□□□□ -1.57
SMCHD1-208ENST00000583344 SLC18B1Q6NT16 456 aa5.22□□□□□ -1.57
SMCHD1-208ENST00000583344 SLC2A7Q6PXP3 512 aa5.22□□□□□ -1.57
SMCHD1-208ENST00000583344 CATIPQ7Z7H3 387 aa5.22□□□□□ -1.57
SMCHD1-208ENST00000583344 DTX2Q86UW9 622 aa5.22□□□□□ -1.57
SMCHD1-208ENST00000583344 PCSK9Q8NBP7 692 aaKnown RBP5.22□□□□□ -1.57
SMCHD1-208ENST00000583344 ZNF48Q96MX3 618 aaPredicted RBP5.22□□□□□ -1.57
SMCHD1-208ENST00000583344 SEMA4CQ9C0C4 833 aa5.22□□□□□ -1.57
SMCHD1-208ENST00000583344 BTBD3Q9Y2F9 522 aa5.22□□□□□ -1.57
SMCHD1-208ENST00000583344 PEG3Q9GZU2 1588 aa5.21□□□□□ -1.57
SMCHD1-208ENST00000583344 SLC16A3O15427 465 aaKnown RBP5.21□□□□□ -1.58
SMCHD1-208ENST00000583344 DTNBO60941 627 aa5.21□□□□□ -1.58
SMCHD1-208ENST00000583344 CERS1P27544 350 aa5.21□□□□□ -1.58
SMCHD1-208ENST00000583344 CYP4F2P78329 520 aa5.21□□□□□ -1.58
SMCHD1-208ENST00000583344 PCID2Q5JVF3 399 aa5.21□□□□□ -1.58
SMCHD1-208ENST00000583344 MORN5Q5VZ52 161 aa5.21□□□□□ -1.58
SMCHD1-208ENST00000583344 ICE2Q659A1 982 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms