RNA–Protein interactions for RNA: ENST00000583294.1

SMARCE1-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-219ENST00000583294 MBD3L3A6NE82 208 aaPredicted RBP6.78□□□□□ -1.32
SMARCE1-219ENST00000583294 MARCH11A6NNE9 402 aa6.78□□□□□ -1.32
SMARCE1-219ENST00000583294 F5H697 171 aa6.78□□□□□ -1.32
SMARCE1-219ENST00000583294 APOL1O14791 398 aa6.78□□□□□ -1.32
SMARCE1-219ENST00000583294 AKAP8O43823 692 aaKnown RBP6.78□□□□□ -1.32
SMARCE1-219ENST00000583294 CDKL5O76039 1030 aa6.78□□□□□ -1.32
SMARCE1-219ENST00000583294 LDHAP00338 332 aaKnown RBP6.78□□□□□ -1.32
SMARCE1-219ENST00000583294 MT-ND5P03915 603 aa6.78□□□□□ -1.32
SMARCE1-219ENST00000583294 IL1R1P14778 569 aa6.78□□□□□ -1.32
SMARCE1-219ENST00000583294 ITGALP20701 1170 aa6.78□□□□□ -1.32
SMARCE1-219ENST00000583294 KLRC1P26715 233 aa6.78□□□□□ -1.32
SMARCE1-219ENST00000583294 VIPR2P41587 438 aa6.78□□□□□ -1.32
SMARCE1-219ENST00000583294 HTR3AP46098 478 aa6.78□□□□□ -1.32
SMARCE1-219ENST00000583294 CARSP49589 748 aaKnown RBP6.78□□□□□ -1.32
SMARCE1-219ENST00000583294 RPS7P62081 194 aaKnown RBP6.78□□□□□ -1.32
SMARCE1-219ENST00000583294 PMS2P11Q13670 270 aa6.78□□□□□ -1.32
SMARCE1-219ENST00000583294 RRAGBQ5VZM2 374 aa6.78□□□□□ -1.32
SMARCE1-219ENST00000583294 HIBCHQ6NVY1 386 aaPredicted RBP6.78□□□□□ -1.32
SMARCE1-219ENST00000583294 TMEM108Q6UXF1 575 aa6.78□□□□□ -1.32
SMARCE1-219ENST00000583294 TOGARAM2Q6ZUX3 1019 aa6.78□□□□□ -1.32
SMARCE1-219ENST00000583294 ZNF280BQ86YH2 543 aa6.78□□□□□ -1.32
SMARCE1-219ENST00000583294 ADGRG5Q8IZF4 528 aa6.78□□□□□ -1.32
SMARCE1-219ENST00000583294 SPICE1Q8N0Z3 855 aa6.78□□□□□ -1.32
SMARCE1-219ENST00000583294 ATP11CQ8NB49 1132 aa6.78□□□□□ -1.32
SMARCE1-219ENST00000583294 SPSB4Q96A44 273 aa6.78□□□□□ -1.32
SMARCE1-219ENST00000583294 KIAA1191Q96A73 305 aa6.78□□□□□ -1.32
SMARCE1-219ENST00000583294 IQCDQ96DY2 449 aa6.78□□□□□ -1.32
SMARCE1-219ENST00000583294 BOD1Q96IK1 185 aa6.78□□□□□ -1.32
SMARCE1-219ENST00000583294 ADAM2Q99965 735 aa6.78□□□□□ -1.32
SMARCE1-219ENST00000583294 NRDE2Q9H7Z3 1164 aa6.78□□□□□ -1.32
SMARCE1-219ENST00000583294 CERS4Q9HA82 394 aa6.78□□□□□ -1.32
SMARCE1-219ENST00000583294 SLC2A4RGQ9NR83 387 aa6.78□□□□□ -1.32
SMARCE1-219ENST00000583294 NEU2Q9Y3R4 380 aa6.78□□□□□ -1.32
SMARCE1-219ENST00000583294 A0A1W2PS29 197 aa6.77□□□□□ -1.33
SMARCE1-219ENST00000583294 MYADML2A6NDP7 307 aa6.77□□□□□ -1.33
SMARCE1-219ENST00000583294 ANXA2P07355 339 aaKnown RBP6.77□□□□□ -1.33
SMARCE1-219ENST00000583294 ATXN1LP0C7T5 689 aaKnown RBP6.77□□□□□ -1.33
SMARCE1-219ENST00000583294 HARSP12081 509 aaKnown RBP6.77□□□□□ -1.33
SMARCE1-219ENST00000583294 XRCC6P12956 609 aaKnown RBP eCLIP6.77□□□□□ -1.33
SMARCE1-219ENST00000583294 ABCB4P21439 1286 aa6.77□□□□□ -1.33
SMARCE1-219ENST00000583294 NPTX2P47972 431 aa6.77□□□□□ -1.33
SMARCE1-219ENST00000583294 NDUFV1P49821 464 aa6.77□□□□□ -1.33
SMARCE1-219ENST00000583294 KRT17Q04695 432 aa6.77□□□□□ -1.33
SMARCE1-219ENST00000583294 TIGD2Q4W5G0 525 aa6.77□□□□□ -1.33
SMARCE1-219ENST00000583294 PLA1AQ53H76 456 aa6.77□□□□□ -1.33
SMARCE1-219ENST00000583294 C10orf62Q5T681 223 aaPredicted RBP6.77□□□□□ -1.33
SMARCE1-219ENST00000583294 IZUMO3Q5VZ72 239 aa6.77□□□□□ -1.33
SMARCE1-219ENST00000583294 C1orf228Q6PIY5 440 aa6.77□□□□□ -1.33
SMARCE1-219ENST00000583294 RNF44Q7L0R7 432 aa6.77□□□□□ -1.33
SMARCE1-219ENST00000583294 DEPTORQ8TB45 409 aa6.77□□□□□ -1.33
SMARCE1-219ENST00000583294 CACTINQ8WUQ7 758 aaKnown RBP6.77□□□□□ -1.33
SMARCE1-219ENST00000583294 SNX19Q92543 992 aa6.77□□□□□ -1.33
SMARCE1-219ENST00000583294 MESP1Q9BRJ9 268 aa6.77□□□□□ -1.33
SMARCE1-219ENST00000583294 UNKLQ9H9P5 680 aaKnown RBP6.77□□□□□ -1.33
SMARCE1-219ENST00000583294 ZSCAN32Q9NX65 697 aa6.77□□□□□ -1.33
SMARCE1-219ENST00000583294 GPRC5BQ9NZH0 403 aa6.77□□□□□ -1.33
SMARCE1-219ENST00000583294 MID2Q9UJV3 735 aa6.77□□□□□ -1.33
SMARCE1-219ENST00000583294 SHOC2Q9UQ13 582 aa6.77□□□□□ -1.33
SMARCE1-219ENST00000583294 PAXBP1Q9Y5B6 917 aa6.77□□□□□ -1.33
SMARCE1-219ENST00000583294 TRGV11A0A075B6L2 103 aa6.76□□□□□ -1.33
SMARCE1-219ENST00000583294 E7ENX8 843 aa6.76□□□□□ -1.33
SMARCE1-219ENST00000583294 hCG_1984214I3L0E3 225 aa6.76□□□□□ -1.33
SMARCE1-219ENST00000583294 RAB27BO00194 218 aa6.76□□□□□ -1.33
SMARCE1-219ENST00000583294 SPDEFO95238 335 aa6.76□□□□□ -1.33
SMARCE1-219ENST00000583294 FSHBP01225 129 aa6.76□□□□□ -1.33
SMARCE1-219ENST00000583294 TXNP10599 105 aaKnown RBP6.76□□□□□ -1.33
SMARCE1-219ENST00000583294 CYP2C9P11712 490 aa6.76□□□□□ -1.33
SMARCE1-219ENST00000583294 FGFR2P21802 821 aa6.76□□□□□ -1.33
SMARCE1-219ENST00000583294 GATA3P23771 443 aa6.76□□□□□ -1.33
SMARCE1-219ENST00000583294 BMPR1AP36894 532 aa6.76□□□□□ -1.33
SMARCE1-219ENST00000583294 PXNP49023 591 aaPredicted RBP6.76□□□□□ -1.33
SMARCE1-219ENST00000583294 VAV2P52735 878 aa6.76□□□□□ -1.33
SMARCE1-219ENST00000583294 WNT3P56703 355 aa6.76□□□□□ -1.33
SMARCE1-219ENST00000583294 TAP2Q03519 686 aa6.76□□□□□ -1.33
SMARCE1-219ENST00000583294 TP53BP2Q13625 1128 aa6.76□□□□□ -1.33
SMARCE1-219ENST00000583294 MORC3Q14149 939 aa6.76□□□□□ -1.33
SMARCE1-219ENST00000583294 ZIK1Q3SY52 487 aaPredicted RBP6.76□□□□□ -1.33
SMARCE1-219ENST00000583294 TMPRSS9Q7Z410 1059 aa6.76□□□□□ -1.33
SMARCE1-219ENST00000583294 FAM9AQ8IZU1 332 aaPredicted RBP6.76□□□□□ -1.33
SMARCE1-219ENST00000583294 SYNE4Q8N205 404 aa6.76□□□□□ -1.33
SMARCE1-219ENST00000583294 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.76□□□□□ -1.33
SMARCE1-219ENST00000583294 MYEOVQ96EZ4 313 aa6.76□□□□□ -1.33
SMARCE1-219ENST00000583294 VPS11Q9H270 941 aa6.76□□□□□ -1.33
SMARCE1-219ENST00000583294 SERHLQ9NQF3 203 aa6.76□□□□□ -1.33
SMARCE1-219ENST00000583294 ANKFY1Q9P2R3 1169 aa6.76□□□□□ -1.33
SMARCE1-219ENST00000583294 ZNF212Q9UDV6 495 aa6.76□□□□□ -1.33
SMARCE1-219ENST00000583294 MRPS17Q9Y2R5 130 aaKnown RBP6.76□□□□□ -1.33
SMARCE1-219ENST00000583294 REXO2Q9Y3B8 237 aaKnown RBP6.76□□□□□ -1.33
SMARCE1-219ENST00000583294 PCDHGB2Q9Y5G2 931 aa6.76□□□□□ -1.33
SMARCE1-219ENST00000583294 A0A0B4J269 797 aa6.75□□□□□ -1.33
SMARCE1-219ENST00000583294 CENPVL1A0A0U1RR11 272 aa6.75□□□□□ -1.33
SMARCE1-219ENST00000583294 H7C4K7 107 aa6.75□□□□□ -1.33
SMARCE1-219ENST00000583294 THAP12O43422 761 aa6.75□□□□□ -1.33
SMARCE1-219ENST00000583294 FOSP01100 380 aaPredicted RBP6.75□□□□□ -1.33
SMARCE1-219ENST00000583294 SETSIPP0DME0 302 aa6.75□□□□□ -1.33
SMARCE1-219ENST00000583294 ITGA8P53708 1063 aa6.75□□□□□ -1.33
SMARCE1-219ENST00000583294 LOXL3P58215 753 aa6.75□□□□□ -1.33
SMARCE1-219ENST00000583294 GUCY1B3Q02153 619 aa6.75□□□□□ -1.33
SMARCE1-219ENST00000583294 FOXE3Q13461 319 aa6.75□□□□□ -1.33
SMARCE1-219ENST00000583294 TUBB3Q13509 450 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms