RNA–Protein interactions for RNA: ENST00000582955.5

SMARCE1-218, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-218ENST00000582955 ST13P5Q8NFI4 369 aaPredicted RBP13.48□□□□□ -0.25
SMARCE1-218ENST00000582955 TAF4BQ92750 862 aa13.48□□□□□ -0.25
SMARCE1-218ENST00000582955 EDAQ92838 391 aa13.48□□□□□ -0.25
SMARCE1-218ENST00000582955 PI4K2AQ9BTU6 479 aa13.48□□□□□ -0.25
SMARCE1-218ENST00000582955 IMPG2Q9BZV3 1241 aa13.48□□□□□ -0.25
SMARCE1-218ENST00000582955 DNAJC25Q9H1X3 360 aa13.48□□□□□ -0.25
SMARCE1-218ENST00000582955 SMYD3Q9H7B4 428 aa13.48□□□□□ -0.25
SMARCE1-218ENST00000582955 VRTNQ9H8Y1 702 aa13.48□□□□□ -0.25
SMARCE1-218ENST00000582955 KCNK12Q9HB15 430 aa13.48□□□□□ -0.25
SMARCE1-218ENST00000582955 TMEM8AQ9HCN3 771 aa13.48□□□□□ -0.25
SMARCE1-218ENST00000582955 AVENQ9NQS1 362 aaPredicted RBP13.48□□□□□ -0.25
SMARCE1-218ENST00000582955 LMBRD1Q9NUN5 540 aa13.48□□□□□ -0.25
SMARCE1-218ENST00000582955 CDH9Q9ULB4 789 aa13.48□□□□□ -0.25
SMARCE1-218ENST00000582955 ZFP37Q9Y6Q3 630 aaPredicted RBP13.48□□□□□ -0.25
SMARCE1-218ENST00000582955 MYBPHLA2RUH7 354 aa13.47□□□□□ -0.25
SMARCE1-218ENST00000582955 A8MXQ7 604 aa13.47□□□□□ -0.25
SMARCE1-218ENST00000582955 STX10O60499 249 aa13.47□□□□□ -0.25
SMARCE1-218ENST00000582955 HAPLN1P10915 354 aaPredicted RBP13.47□□□□□ -0.25
SMARCE1-218ENST00000582955 CEBPBP17676 345 aa13.47□□□□□ -0.25
SMARCE1-218ENST00000582955 ATF6P18850 670 aa13.47□□□□□ -0.25
SMARCE1-218ENST00000582955 MXI1P50539 228 aa13.47□□□□□ -0.25
SMARCE1-218ENST00000582955 CDH8P55286 799 aa13.47□□□□□ -0.25
SMARCE1-218ENST00000582955 STX17P56962 302 aa13.47□□□□□ -0.25
SMARCE1-218ENST00000582955 PAK1Q13153 545 aa13.47□□□□□ -0.25
SMARCE1-218ENST00000582955 TAF12Q16514 161 aa13.47□□□□□ -0.25
SMARCE1-218ENST00000582955 TMEM31Q5JXX7 168 aa13.47□□□□□ -0.25
SMARCE1-218ENST00000582955 PRSS36Q5K4E3 855 aa13.47□□□□□ -0.25
SMARCE1-218ENST00000582955 SPOPLQ6IQ16 392 aa13.47□□□□□ -0.25
SMARCE1-218ENST00000582955 TTI2Q6NXR4 508 aa13.47□□□□□ -0.25
SMARCE1-218ENST00000582955 ZC3H3Q8IXZ2 948 aaKnown RBP13.47□□□□□ -0.25
SMARCE1-218ENST00000582955 LEMD2Q8NC56 503 aa13.47□□□□□ -0.25
SMARCE1-218ENST00000582955 CCDC150Q8NCX0 1101 aa13.47□□□□□ -0.25
SMARCE1-218ENST00000582955 TAS1R2Q8TE23 839 aa13.47□□□□□ -0.25
SMARCE1-218ENST00000582955 GIPC2Q8TF65 315 aa13.47□□□□□ -0.25
SMARCE1-218ENST00000582955 RSAD2Q8WXG1 361 aa13.47□□□□□ -0.25
SMARCE1-218ENST00000582955 PSMG2Q969U7 264 aa13.47□□□□□ -0.25
SMARCE1-218ENST00000582955 MYLPFQ96A32 169 aa13.47□□□□□ -0.25
SMARCE1-218ENST00000582955 TCEAL4Q96EI5 215 aa13.47□□□□□ -0.25
SMARCE1-218ENST00000582955 MCRS1Q96EZ8 462 aa13.47□□□□□ -0.25
SMARCE1-218ENST00000582955 PKMYT1Q99640 499 aa13.47□□□□□ -0.25
SMARCE1-218ENST00000582955 LPIN3Q9BQK8 851 aa13.47□□□□□ -0.25
SMARCE1-218ENST00000582955 NUP62CLQ9H1M0 184 aa13.47□□□□□ -0.25
SMARCE1-218ENST00000582955 SMOC2Q9H3U7 446 aa13.47□□□□□ -0.25
SMARCE1-218ENST00000582955 IGSF9Q9P2J2 1179 aa13.47□□□□□ -0.25
SMARCE1-218ENST00000582955 ARMCX3Q9UH62 379 aaPredicted RBP13.47□□□□□ -0.25
SMARCE1-218ENST00000582955 ASB3Q9Y575 518 aa13.47□□□□□ -0.25
SMARCE1-218ENST00000582955 DOCK8Q8NF50 2099 aa13.46□□□□□ -0.25
SMARCE1-218ENST00000582955 NOTCH4Q99466 2003 aa13.46□□□□□ -0.25
SMARCE1-218ENST00000582955 ASS1P00966 412 aaKnown RBP13.46□□□□□ -0.25
SMARCE1-218ENST00000582955 FAM163BP0C2L3 166 aa13.46□□□□□ -0.25
SMARCE1-218ENST00000582955 GJA1P17302 382 aa13.46□□□□□ -0.25
SMARCE1-218ENST00000582955 CYP2F1P24903 491 aa13.46□□□□□ -0.25
SMARCE1-218ENST00000582955 GTF2H1P32780 548 aa13.46□□□□□ -0.25
SMARCE1-218ENST00000582955 CCR2P41597 374 aa13.46□□□□□ -0.25
SMARCE1-218ENST00000582955 CYP27A1Q02318 531 aa13.46□□□□□ -0.25
SMARCE1-218ENST00000582955 TDGQ13569 410 aa13.46□□□□□ -0.25
SMARCE1-218ENST00000582955 MAPRE1Q15691 268 aaKnown RBP13.46□□□□□ -0.25
SMARCE1-218ENST00000582955 CCDC40Q4G0X9 1142 aa13.46□□□□□ -0.25
SMARCE1-218ENST00000582955 MDH1BQ5I0G3 518 aa13.46□□□□□ -0.25
SMARCE1-218ENST00000582955 KRT39Q6A163 491 aa13.46□□□□□ -0.25
SMARCE1-218ENST00000582955 C4orf50Q6ZRC1 276 aa13.46□□□□□ -0.25
SMARCE1-218ENST00000582955 DNAJB7Q7Z6W7 309 aaPredicted RBP13.46□□□□□ -0.25
SMARCE1-218ENST00000582955 UBALD2Q8IYN6 164 aa13.46□□□□□ -0.25
SMARCE1-218ENST00000582955 GPR152Q8TDT2 470 aa13.46□□□□□ -0.25
SMARCE1-218ENST00000582955 CEP63Q96MT8 703 aa13.46□□□□□ -0.25
SMARCE1-218ENST00000582955 DUSP9Q99956 384 aaKnown RBP13.46□□□□□ -0.25
SMARCE1-218ENST00000582955 ABCB6Q9NP58 842 aa13.46□□□□□ -0.25
SMARCE1-218ENST00000582955 CRTAC1Q9NQ79 661 aa13.46□□□□□ -0.25
SMARCE1-218ENST00000582955 MAGEC2Q9UBF1 373 aaPredicted RBP13.46□□□□□ -0.25
SMARCE1-218ENST00000582955 NME7Q9Y5B8 376 aa13.46□□□□□ -0.25
SMARCE1-218ENST00000582955 NUMBLQ9Y6R0 609 aa13.46□□□□□ -0.25
SMARCE1-218ENST00000582955 MYO10Q9HD67 2058 aa13.45□□□□□ -0.26
SMARCE1-218ENST00000582955 A0A1W2PRU2 124 aa13.45□□□□□ -0.26
SMARCE1-218ENST00000582955 PTPN1P18031 435 aaKnown RBP13.45□□□□□ -0.26
SMARCE1-218ENST00000582955 GPR15P49685 360 aa13.45□□□□□ -0.26
SMARCE1-218ENST00000582955 EPHA5P54756 1037 aa13.45□□□□□ -0.26
SMARCE1-218ENST00000582955 RPL10AP62906 217 aaKnown RBP13.45□□□□□ -0.26
SMARCE1-218ENST00000582955 NOP14P78316 857 aaKnown RBP13.45□□□□□ -0.26
SMARCE1-218ENST00000582955 SIGLEC14Q08ET2 396 aa13.45□□□□□ -0.26
SMARCE1-218ENST00000582955 HTR4Q13639 388 aa13.45□□□□□ -0.26
SMARCE1-218ENST00000582955 TEAD2Q15562 447 aa13.45□□□□□ -0.26
SMARCE1-218ENST00000582955 DDR2Q16832 855 aa13.45□□□□□ -0.26
SMARCE1-218ENST00000582955 SDHAF4Q5VUM1 108 aa13.45□□□□□ -0.26
SMARCE1-218ENST00000582955 FAM171BQ6P995 826 aa13.45□□□□□ -0.26
SMARCE1-218ENST00000582955 PARM1Q6UWI2 310 aa13.45□□□□□ -0.26
SMARCE1-218ENST00000582955 TRIM67Q6ZTA4 783 aa13.45□□□□□ -0.26
SMARCE1-218ENST00000582955 MTSS1LQ765P7 747 aa13.45□□□□□ -0.26
SMARCE1-218ENST00000582955 FILIP1Q7Z7B0 1213 aa13.45□□□□□ -0.26
SMARCE1-218ENST00000582955 TMC8Q8IU68 726 aa13.45□□□□□ -0.26
SMARCE1-218ENST00000582955 SCN4BQ8IWT1 228 aa13.45□□□□□ -0.26
SMARCE1-218ENST00000582955 NXPE3Q969Y0 559 aa13.45□□□□□ -0.26
SMARCE1-218ENST00000582955 FUBP3Q96I24 572 aaKnown RBP eCLIP13.45□□□□□ -0.26
SMARCE1-218ENST00000582955 GCNAQ96QF7 691 aa13.45□□□□□ -0.26
SMARCE1-218ENST00000582955 SDCBP2Q9H190 292 aa13.45□□□□□ -0.26
SMARCE1-218ENST00000582955 DPEP3Q9H4B8 488 aa13.45□□□□□ -0.26
SMARCE1-218ENST00000582955 SLITRK6Q9H5Y7 841 aa13.45□□□□□ -0.26
SMARCE1-218ENST00000582955 METTL14Q9HCE5 456 aaKnown RBP13.45□□□□□ -0.26
SMARCE1-218ENST00000582955 ZNF334Q9HCZ1 680 aaPredicted RBP13.45□□□□□ -0.26
SMARCE1-218ENST00000582955 C11orf16Q9NQ32 467 aa13.45□□□□□ -0.26
SMARCE1-218ENST00000582955 GDE1Q9NZC3 331 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms