RNA–Protein interactions for RNA: ENST00000582885.1

CCDC57-216, Transcript of coiled-coil domain containing 57, humanhuman

TSL 3

Gene CCDC57, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-216ENST00000582885 NAGPAQ9UK23 515 aa12.76□□□□□ -0.37
CCDC57-216ENST00000582885 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.76□□□□□ -0.37
CCDC57-216ENST00000582885 ZKSCAN5Q9Y2L8 839 aa12.76□□□□□ -0.37
CCDC57-216ENST00000582885 TIMM13Q9Y5L4 95 aaPredicted RBP12.76□□□□□ -0.37
CCDC57-216ENST00000582885 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.75□□□□□ -0.37
CCDC57-216ENST00000582885 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.75□□□□□ -0.37
CCDC57-216ENST00000582885 LINC01553A4QN01 128 aa12.75□□□□□ -0.37
CCDC57-216ENST00000582885 C5orf67F2Z3F1 127 aa12.75□□□□□ -0.37
CCDC57-216ENST00000582885 TBC1D4O60343 1298 aa12.75□□□□□ -0.37
CCDC57-216ENST00000582885 CYP1A1P04798 512 aaPredicted RBP12.75□□□□□ -0.37
CCDC57-216ENST00000582885 RB1P06400 928 aa12.75□□□□□ -0.37
CCDC57-216ENST00000582885 UNGP13051 313 aaPredicted RBP12.75□□□□□ -0.37
CCDC57-216ENST00000582885 BRD2P25440 801 aaKnown RBP12.75□□□□□ -0.37
CCDC57-216ENST00000582885 BMPR1AP36894 532 aa12.75□□□□□ -0.37
CCDC57-216ENST00000582885 KRT17Q04695 432 aa12.75□□□□□ -0.37
CCDC57-216ENST00000582885 SPA17Q15506 151 aa12.75□□□□□ -0.37
CCDC57-216ENST00000582885 INTS6LQ5JSJ4 861 aaKnown RBP12.75□□□□□ -0.37
CCDC57-216ENST00000582885 ZNF280DQ6N043 979 aa12.75□□□□□ -0.37
CCDC57-216ENST00000582885 GPIHBP1Q8IV16 184 aa12.75□□□□□ -0.37
CCDC57-216ENST00000582885 MYCBPAPQ8TBZ2 947 aa12.75□□□□□ -0.37
CCDC57-216ENST00000582885 PIK3R5Q8WYR1 880 aa12.75□□□□□ -0.37
CCDC57-216ENST00000582885 PKMYT1Q99640 499 aa12.75□□□□□ -0.37
CCDC57-216ENST00000582885 HNRNPABQ99729 332 aaKnown RBP12.75□□□□□ -0.37
CCDC57-216ENST00000582885 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.75□□□□□ -0.37
CCDC57-216ENST00000582885 VN1R3Q9BXE9 311 aa12.75□□□□□ -0.37
CCDC57-216ENST00000582885 ISCUQ9H1K1 167 aa12.75□□□□□ -0.37
CCDC57-216ENST00000582885 DPEP3Q9H4B8 488 aa12.75□□□□□ -0.37
CCDC57-216ENST00000582885 LUC7LQ9NQ29 371 aaKnown RBP12.75□□□□□ -0.37
CCDC57-216ENST00000582885 CRTAC1Q9NQ79 661 aa12.75□□□□□ -0.37
CCDC57-216ENST00000582885 KCND1Q9NSA2 647 aa12.75□□□□□ -0.37
CCDC57-216ENST00000582885 PUF60Q9UHX1 559 aaKnown RBP12.75□□□□□ -0.37
CCDC57-216ENST00000582885 INTUQ9ULD6 942 aa12.75□□□□□ -0.37
CCDC57-216ENST00000582885 LZTS1Q9Y250 596 aa12.75□□□□□ -0.37
CCDC57-216ENST00000582885 BACE2Q9Y5Z0 518 aa12.75□□□□□ -0.37
CCDC57-216ENST00000582885 ADGRG1Q9Y653 693 aa12.75□□□□□ -0.37
CCDC57-216ENST00000582885 LCHNA4D1U4 455 aa12.74□□□□□ -0.37
CCDC57-216ENST00000582885 ZNF263O14978 683 aa12.74□□□□□ -0.37
CCDC57-216ENST00000582885 HCRTO43612 131 aa12.74□□□□□ -0.37
CCDC57-216ENST00000582885 RTN2O75298 545 aa12.74□□□□□ -0.37
CCDC57-216ENST00000582885 FGF18O76093 207 aa12.74□□□□□ -0.37
CCDC57-216ENST00000582885 CALCAP01258 141 aa12.74□□□□□ -0.37
CCDC57-216ENST00000582885 CCDC175P0C221 793 aa12.74□□□□□ -0.37
CCDC57-216ENST00000582885 ACAT1P24752 427 aaKnown RBP12.74□□□□□ -0.37
CCDC57-216ENST00000582885 TSPY1Q01534 308 aa12.74□□□□□ -0.37
CCDC57-216ENST00000582885 DSG1Q02413 1049 aa12.74□□□□□ -0.37
CCDC57-216ENST00000582885 CENPCQ03188 943 aa12.74□□□□□ -0.37
CCDC57-216ENST00000582885 GFPT1Q06210 699 aaPredicted RBP12.74□□□□□ -0.37
CCDC57-216ENST00000582885 SMARCB1Q12824 385 aa12.74□□□□□ -0.37
CCDC57-216ENST00000582885 ORC1Q13415 861 aa12.74□□□□□ -0.37
CCDC57-216ENST00000582885 CLEC16AQ2KHT3 1053 aa12.74□□□□□ -0.37
CCDC57-216ENST00000582885 RTP2Q5QGT7 225 aa12.74□□□□□ -0.37
CCDC57-216ENST00000582885 PPP1R26Q5T8A7 1209 aaPredicted RBP12.74□□□□□ -0.37
CCDC57-216ENST00000582885 KIAA0319Q5VV43 1072 aa12.74□□□□□ -0.37
CCDC57-216ENST00000582885 TAF3Q5VWG9 929 aa12.74□□□□□ -0.37
CCDC57-216ENST00000582885 ALKBH5Q6P6C2 394 aaKnown RBP12.74□□□□□ -0.37
CCDC57-216ENST00000582885 ZNF662Q6ZS27 426 aa12.74□□□□□ -0.37
CCDC57-216ENST00000582885 TOGARAM2Q6ZUX3 1019 aa12.74□□□□□ -0.37
CCDC57-216ENST00000582885 TAS1R1Q7RTX1 841 aa12.74□□□□□ -0.37
CCDC57-216ENST00000582885 DCP1BQ8IZD4 617 aaKnown RBP12.74□□□□□ -0.37
CCDC57-216ENST00000582885 TXLNBQ8N3L3 684 aa12.74□□□□□ -0.37
CCDC57-216ENST00000582885 C12orf29Q8N999 325 aa12.74□□□□□ -0.37
CCDC57-216ENST00000582885 TMEM35BQ8NCS4 154 aa12.74□□□□□ -0.37
CCDC57-216ENST00000582885 OR10T2Q8NGX3 314 aa12.74□□□□□ -0.37
CCDC57-216ENST00000582885 KIAA1524Q8TCG1 905 aa12.74□□□□□ -0.37
CCDC57-216ENST00000582885 CYFIP2Q96F07 1278 aa12.74□□□□□ -0.37
CCDC57-216ENST00000582885 PCDHB18PQ96TA0 734 aa12.74□□□□□ -0.37
CCDC57-216ENST00000582885 ZCWPW1Q9H0M4 648 aa12.74□□□□□ -0.37
CCDC57-216ENST00000582885 PDCL3Q9H2J4 239 aa12.74□□□□□ -0.37
CCDC57-216ENST00000582885 SPTLC3Q9NUV7 552 aa12.74□□□□□ -0.37
CCDC57-216ENST00000582885 MTRRQ9UBK8 725 aa12.74□□□□□ -0.37
CCDC57-216ENST00000582885 PYCARDQ9ULZ3 195 aa12.74□□□□□ -0.37
CCDC57-216ENST00000582885 SSX2IPQ9Y2D8 614 aa12.74□□□□□ -0.37
CCDC57-216ENST00000582885 CEP83Q9Y592 693 aa12.74□□□□□ -0.37
CCDC57-216ENST00000582885 PLXNA3P51805 1871 aa12.74□□□□□ -0.37
CCDC57-216ENST00000582885 MYBPHLA2RUH7 354 aa12.73□□□□□ -0.37
CCDC57-216ENST00000582885 CCP110O43303 1012 aa12.73□□□□□ -0.37
CCDC57-216ENST00000582885 ATP2C2O75185 946 aa12.73□□□□□ -0.37
CCDC57-216ENST00000582885 MICAL2O94851 1124 aa12.73□□□□□ -0.37
CCDC57-216ENST00000582885 SETSIPP0DME0 302 aa12.73□□□□□ -0.37
CCDC57-216ENST00000582885 MAGEA1P43355 309 aa12.73□□□□□ -0.37
CCDC57-216ENST00000582885 GLUD2P49448 558 aa12.73□□□□□ -0.37
CCDC57-216ENST00000582885 RABGGTBP53611 331 aa12.73□□□□□ -0.37
CCDC57-216ENST00000582885 NOMO3P69849 1222 aa12.73□□□□□ -0.37
CCDC57-216ENST00000582885 UBE3AQ05086 875 aa12.73□□□□□ -0.37
CCDC57-216ENST00000582885 RAB30Q15771 203 aa12.73□□□□□ -0.37
CCDC57-216ENST00000582885 NFE2Q16621 373 aaPredicted RBP12.73□□□□□ -0.37
CCDC57-216ENST00000582885 CTXN3Q4LDR2 81 aa12.73□□□□□ -0.37
CCDC57-216ENST00000582885 PKDCCQ504Y2 493 aa12.73□□□□□ -0.37
CCDC57-216ENST00000582885 CCDC122Q5T0U0 273 aa12.73□□□□□ -0.37
CCDC57-216ENST00000582885 FAM109BQ6ICB4 259 aaPredicted RBP12.73□□□□□ -0.37
CCDC57-216ENST00000582885 ACAD10Q6JQN1 1059 aa12.73□□□□□ -0.37
CCDC57-216ENST00000582885 CEP57Q86XR8 500 aa12.73□□□□□ -0.37
CCDC57-216ENST00000582885 PALB2Q86YC2 1186 aa12.73□□□□□ -0.37
CCDC57-216ENST00000582885 FUKQ8N0W3 1084 aa12.73□□□□□ -0.37
CCDC57-216ENST00000582885 ANKRD52Q8NB46 1076 aa12.73□□□□□ -0.37
CCDC57-216ENST00000582885 KLHL23Q8NBE8 558 aa12.73□□□□□ -0.37
CCDC57-216ENST00000582885 STK32AQ8WU08 396 aa12.73□□□□□ -0.37
CCDC57-216ENST00000582885 VCPIP1Q96JH7 1222 aa12.73□□□□□ -0.37
CCDC57-216ENST00000582885 FAM49BQ9NUQ9 324 aa12.73□□□□□ -0.37
CCDC57-216ENST00000582885 HESX1Q9UBX0 185 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms