RNA–Protein interactions for RNA: ENST00000582370.1

PDLIM1P3-201, Transcript of PDZ and LIM domain 1 pseudogene 3, humanhuman

BASIC

Gene PDLIM1P3, Length 599 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P3-201ENST00000582370 CITO14578 2027 aa9.43□□□□□ -0.9
PDLIM1P3-201ENST00000582370 KIF26AQ9ULI4 1882 aaPredicted RBP9.42□□□□□ -0.9
PDLIM1P3-201ENST00000582370 SF3B1O75533 1304 aaKnown RBP eCLIP9.42□□□□□ -0.9
PDLIM1P3-201ENST00000582370 A0A0B4J269 797 aa9.42□□□□□ -0.9
PDLIM1P3-201ENST00000582370 GOLGA6L3A6NEY3 463 aa9.42□□□□□ -0.9
PDLIM1P3-201ENST00000582370 LRRC10BA6NIK2 292 aa9.42□□□□□ -0.9
PDLIM1P3-201ENST00000582370 ZNF233A6NK53 670 aa9.42□□□□□ -0.9
PDLIM1P3-201ENST00000582370 F8W810 466 aa9.42□□□□□ -0.9
PDLIM1P3-201ENST00000582370 AXIN1O15169 862 aa9.42□□□□□ -0.9
PDLIM1P3-201ENST00000582370 OGTO15294 1046 aa9.42□□□□□ -0.9
PDLIM1P3-201ENST00000582370 CCL16O15467 120 aa9.42□□□□□ -0.9
PDLIM1P3-201ENST00000582370 CBFA2T2O43439 604 aa9.42□□□□□ -0.9
PDLIM1P3-201ENST00000582370 XPOTO43592 962 aaKnown RBP9.42□□□□□ -0.9
PDLIM1P3-201ENST00000582370 EXTL3O43909 919 aa9.42□□□□□ -0.9
PDLIM1P3-201ENST00000582370 TSPAN1O60635 241 aa9.42□□□□□ -0.9
PDLIM1P3-201ENST00000582370 EXOC3O60645 756 aa9.42□□□□□ -0.9
PDLIM1P3-201ENST00000582370 IL18RAPO95256 599 aa9.42□□□□□ -0.9
PDLIM1P3-201ENST00000582370 CHRNB1P11230 501 aa9.42□□□□□ -0.9
PDLIM1P3-201ENST00000582370 ITGA4P13612 1032 aa9.42□□□□□ -0.9
PDLIM1P3-201ENST00000582370 CDK11BP21127 795 aaKnown RBP9.42□□□□□ -0.9
PDLIM1P3-201ENST00000582370 PROZP22891 400 aa9.42□□□□□ -0.9
PDLIM1P3-201ENST00000582370 HOXA6P31267 233 aa9.42□□□□□ -0.9
PDLIM1P3-201ENST00000582370 MLH1P40692 756 aa9.42□□□□□ -0.9
PDLIM1P3-201ENST00000582370 MATR3P43243 847 aaKnown RBP eCLIP9.42□□□□□ -0.9
PDLIM1P3-201ENST00000582370 CASP5P51878 434 aa9.42□□□□□ -0.9
PDLIM1P3-201ENST00000582370 YARSP54577 528 aaKnown RBP9.42□□□□□ -0.9
PDLIM1P3-201ENST00000582370 MCCD1P59942 119 aaPredicted RBP9.42□□□□□ -0.9
PDLIM1P3-201ENST00000582370 GAS6Q14393 721 aa9.42□□□□□ -0.9
PDLIM1P3-201ENST00000582370 GSE1Q14687 1217 aa9.42□□□□□ -0.9
PDLIM1P3-201ENST00000582370 UBXN11Q5T124 520 aa9.42□□□□□ -0.9
PDLIM1P3-201ENST00000582370 RNF43Q68DV7 783 aa9.42□□□□□ -0.9
PDLIM1P3-201ENST00000582370 ANKRD40Q6AI12 368 aa9.42□□□□□ -0.9
PDLIM1P3-201ENST00000582370 ISM2Q6H9L7 571 aa9.42□□□□□ -0.9
PDLIM1P3-201ENST00000582370 WDR5BQ86VZ2 330 aa9.42□□□□□ -0.9
PDLIM1P3-201ENST00000582370 KSR1Q8IVT5 923 aa9.42□□□□□ -0.9
PDLIM1P3-201ENST00000582370 GPD1LQ8N335 351 aa9.42□□□□□ -0.9
PDLIM1P3-201ENST00000582370 PIK3R5Q8WYR1 880 aa9.42□□□□□ -0.9
PDLIM1P3-201ENST00000582370 IQCDQ96DY2 449 aa9.42□□□□□ -0.9
PDLIM1P3-201ENST00000582370 MSTO1Q9BUK6 570 aa9.42□□□□□ -0.9
PDLIM1P3-201ENST00000582370 PLA2G2FQ9BZM2 168 aa9.42□□□□□ -0.9
PDLIM1P3-201ENST00000582370 PTPRHQ9HD43 1115 aa9.42□□□□□ -0.9
PDLIM1P3-201ENST00000582370 AVENQ9NQS1 362 aaPredicted RBP9.42□□□□□ -0.9
PDLIM1P3-201ENST00000582370 DMAC2Q9NW81 257 aa9.42□□□□□ -0.9
PDLIM1P3-201ENST00000582370 AGO2Q9UKV8 859 aaKnown RBP9.42□□□□□ -0.9
PDLIM1P3-201ENST00000582370 MAPK8IP1Q9UQF2 711 aa9.42□□□□□ -0.9
PDLIM1P3-201ENST00000582370 MRPS23Q9Y3D9 190 aaKnown RBP9.42□□□□□ -0.9
PDLIM1P3-201ENST00000582370 DAAM1Q9Y4D1 1078 aa9.42□□□□□ -0.9
PDLIM1P3-201ENST00000582370 PIAS3Q9Y6X2 628 aa9.42□□□□□ -0.9
PDLIM1P3-201ENST00000582370 NUP210Q8TEM1 1887 aaPredicted RBP9.42□□□□□ -0.9
PDLIM1P3-201ENST00000582370 FREM2Q5SZK8 3169 aa9.42□□□□□ -0.9
PDLIM1P3-201ENST00000582370 ARL5CA6NH57 179 aa9.41□□□□□ -0.9
PDLIM1P3-201ENST00000582370 P4HA2O15460 535 aa9.41□□□□□ -0.9
PDLIM1P3-201ENST00000582370 TGFB1I1O43294 461 aa9.41□□□□□ -0.9
PDLIM1P3-201ENST00000582370 CLTAP09496 248 aa9.41□□□□□ -0.9
PDLIM1P3-201ENST00000582370 CD44P16070 742 aaKnown RBP9.41□□□□□ -0.9
PDLIM1P3-201ENST00000582370 ARF4P18085 180 aaPredicted RBP9.41□□□□□ -0.9
PDLIM1P3-201ENST00000582370 PAX3P23760 479 aa9.41□□□□□ -0.9
PDLIM1P3-201ENST00000582370 GTF2H1P32780 548 aa9.41□□□□□ -0.9
PDLIM1P3-201ENST00000582370 RAP1GAPP47736 663 aa9.41□□□□□ -0.9
PDLIM1P3-201ENST00000582370 SCNN1GP51170 649 aa9.41□□□□□ -0.9
PDLIM1P3-201ENST00000582370 MLLT6P55198 1093 aaPredicted RBP9.41□□□□□ -0.9
PDLIM1P3-201ENST00000582370 IQCB1Q15051 598 aa9.41□□□□□ -0.9
PDLIM1P3-201ENST00000582370 PSMD5Q16401 504 aa9.41□□□□□ -0.9
PDLIM1P3-201ENST00000582370 ZNF568Q3ZCX4 644 aa9.41□□□□□ -0.9
PDLIM1P3-201ENST00000582370 RTP2Q5QGT7 225 aa9.41□□□□□ -0.9
PDLIM1P3-201ENST00000582370 HEATR6Q6AI08 1181 aaKnown RBP9.41□□□□□ -0.9
PDLIM1P3-201ENST00000582370 TANGO2Q6ICL3 276 aa9.41□□□□□ -0.9
PDLIM1P3-201ENST00000582370 PDXDC1Q6P996 788 aa9.41□□□□□ -0.9
PDLIM1P3-201ENST00000582370 CACNA2D4Q7Z3S7 1137 aa9.41□□□□□ -0.9
PDLIM1P3-201ENST00000582370 NELFCDQ8IXH7 590 aa9.41□□□□□ -0.9
PDLIM1P3-201ENST00000582370 SMYD4Q8IYR2 804 aaPredicted RBP9.41□□□□□ -0.9
PDLIM1P3-201ENST00000582370 SMG8Q8ND04 991 aaKnown RBP9.41□□□□□ -0.9
PDLIM1P3-201ENST00000582370 SLC7A14Q8TBB6 771 aa9.41□□□□□ -0.9
PDLIM1P3-201ENST00000582370 ING5Q8WYH8 240 aa9.41□□□□□ -0.9
PDLIM1P3-201ENST00000582370 HPS3Q969F9 1004 aa9.41□□□□□ -0.9
PDLIM1P3-201ENST00000582370 MCRS1Q96EZ8 462 aa9.41□□□□□ -0.9
PDLIM1P3-201ENST00000582370 FAM81BQ96LP2 452 aa9.41□□□□□ -0.9
PDLIM1P3-201ENST00000582370 GAD1Q99259 594 aa9.41□□□□□ -0.9
PDLIM1P3-201ENST00000582370 CLSTN3Q9BQT9 956 aa9.41□□□□□ -0.9
PDLIM1P3-201ENST00000582370 TRMT61BQ9BVS5 477 aaKnown RBP9.41□□□□□ -0.9
PDLIM1P3-201ENST00000582370 CCDC94Q9BW85 323 aaPredicted RBP9.41□□□□□ -0.9
PDLIM1P3-201ENST00000582370 SCNM1Q9BWG6 230 aa9.41□□□□□ -0.9
PDLIM1P3-201ENST00000582370 SRRTQ9BXP5 876 aaKnown RBP9.41□□□□□ -0.9
PDLIM1P3-201ENST00000582370 ASB7Q9H672 318 aa9.41□□□□□ -0.9
PDLIM1P3-201ENST00000582370 CBX8Q9HC52 389 aa9.41□□□□□ -0.9
PDLIM1P3-201ENST00000582370 ZFP14Q9HCL3 533 aa9.41□□□□□ -0.9
PDLIM1P3-201ENST00000582370 ZNF334Q9HCZ1 680 aaPredicted RBP9.41□□□□□ -0.9
PDLIM1P3-201ENST00000582370 VPS45Q9NRW7 570 aa9.41□□□□□ -0.9
PDLIM1P3-201ENST00000582370 HCFC1R1Q9NWW0 138 aa9.41□□□□□ -0.9
PDLIM1P3-201ENST00000582370 HSPBP1Q9NZL4 362 aa9.41□□□□□ -0.9
PDLIM1P3-201ENST00000582370 DNMT3BQ9UBC3 853 aaKnown RBP9.41□□□□□ -0.9
PDLIM1P3-201ENST00000582370 ARMCX3Q9UH62 379 aaPredicted RBP9.41□□□□□ -0.9
PDLIM1P3-201ENST00000582370 DERAQ9Y315 318 aa9.41□□□□□ -0.9
PDLIM1P3-201ENST00000582370 CCDC163A0A0D9SF12 145 aa9.4□□□□□ -0.9
PDLIM1P3-201ENST00000582370 PMM2O15305 246 aa9.4□□□□□ -0.9
PDLIM1P3-201ENST00000582370 SPINK2P20155 84 aa9.4□□□□□ -0.9
PDLIM1P3-201ENST00000582370 FCARP24071 287 aa9.4□□□□□ -0.9
PDLIM1P3-201ENST00000582370 HOXA11P31270 313 aaPredicted RBP9.4□□□□□ -0.9
PDLIM1P3-201ENST00000582370 HOXD13P35453 343 aa9.4□□□□□ -0.9
PDLIM1P3-201ENST00000582370 MPLP40238 635 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms