RNA–Protein interactions for RNA: ENST00000581265.1

RFFL-209, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 596 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-209ENST00000581265 PCDHB5Q9Y5E4 795 aa11.43□□□□□ -0.58
RFFL-209ENST00000581265 SRPRBQ9Y5M8 271 aaKnown RBP11.43□□□□□ -0.58
RFFL-209ENST00000581265 SDK1Q7Z5N4 2213 aa11.42□□□□□ -0.58
RFFL-209ENST00000581265 MYMKA6NI61 221 aa11.42□□□□□ -0.58
RFFL-209ENST00000581265 GDF9O60383 454 aa11.42□□□□□ -0.58
RFFL-209ENST00000581265 GAP43P17677 238 aa11.42□□□□□ -0.58
RFFL-209ENST00000581265 PDCP20941 246 aa11.42□□□□□ -0.58
RFFL-209ENST00000581265 DDX6P26196 483 aaKnown RBP eCLIP11.42□□□□□ -0.58
RFFL-209ENST00000581265 CDR1P51861 262 aa11.42□□□□□ -0.58
RFFL-209ENST00000581265 NLRP12P59046 1061 aa11.42□□□□□ -0.58
RFFL-209ENST00000581265 KCNA1Q09470 495 aa11.42□□□□□ -0.58
RFFL-209ENST00000581265 CUL4AQ13619 759 aa11.42□□□□□ -0.58
RFFL-209ENST00000581265 PON2Q15165 354 aa11.42□□□□□ -0.58
RFFL-209ENST00000581265 NFE2Q16621 373 aaPredicted RBP11.42□□□□□ -0.58
RFFL-209ENST00000581265 RRAGBQ5VZM2 374 aa11.42□□□□□ -0.58
RFFL-209ENST00000581265 SV2BQ7L1I2 683 aa11.42□□□□□ -0.58
RFFL-209ENST00000581265 C12orf50Q8NA57 414 aaPredicted RBP11.42□□□□□ -0.58
RFFL-209ENST00000581265 ACCSQ96QU6 501 aa11.42□□□□□ -0.58
RFFL-209ENST00000581265 ACBD6Q9BR61 282 aa11.42□□□□□ -0.58
RFFL-209ENST00000581265 SMG9Q9H0W8 520 aaKnown RBP11.42□□□□□ -0.58
RFFL-209ENST00000581265 MRPL44Q9H9J2 332 aaKnown RBP11.42□□□□□ -0.58
RFFL-209ENST00000581265 OLFML3Q9NRN5 406 aa11.42□□□□□ -0.58
RFFL-209ENST00000581265 TMLHEQ9NVH6 421 aa11.42□□□□□ -0.58
RFFL-209ENST00000581265 C2orf42Q9NWW7 574 aa11.42□□□□□ -0.58
RFFL-209ENST00000581265 ABI2Q9NYB9 513 aaPredicted RBP11.42□□□□□ -0.58
RFFL-209ENST00000581265 FBXO2Q9UK22 296 aaPredicted RBP11.42□□□□□ -0.58
RFFL-209ENST00000581265 PCDHB13Q9Y5F0 798 aa11.42□□□□□ -0.58
RFFL-209ENST00000581265 CLIC4Q9Y696 253 aa11.42□□□□□ -0.58
RFFL-209ENST00000581265 ANK1P16157 1881 aa11.41□□□□□ -0.58
RFFL-209ENST00000581265 CCDC163A0A0D9SF12 145 aa11.41□□□□□ -0.58
RFFL-209ENST00000581265 TRDMT1O14717 391 aaKnown RBP11.41□□□□□ -0.58
RFFL-209ENST00000581265 LDHAP00338 332 aaKnown RBP11.41□□□□□ -0.58
RFFL-209ENST00000581265 CSH1P0DML2 217 aa11.41□□□□□ -0.58
RFFL-209ENST00000581265 CSH2P0DML3 217 aa11.41□□□□□ -0.58
RFFL-209ENST00000581265 GARTP22102 1010 aa11.41□□□□□ -0.58
RFFL-209ENST00000581265 AVPR1AP37288 418 aa11.41□□□□□ -0.58
RFFL-209ENST00000581265 WNT7BP56706 349 aa11.41□□□□□ -0.58
RFFL-209ENST00000581265 TFAMQ00059 246 aaKnown RBP11.41□□□□□ -0.58
RFFL-209ENST00000581265 TSPY1Q01534 308 aa11.41□□□□□ -0.58
RFFL-209ENST00000581265 RUNX3Q13761 415 aa11.41□□□□□ -0.58
RFFL-209ENST00000581265 TMEM196Q5HYL7 178 aa11.41□□□□□ -0.58
RFFL-209ENST00000581265 L1TD1Q5T7N2 865 aaKnown RBP11.41□□□□□ -0.58
RFFL-209ENST00000581265 UNQ6494/PRO21346Q6UXR6 183 aa11.41□□□□□ -0.58
RFFL-209ENST00000581265 MON1AQ86VX9 555 aa11.41□□□□□ -0.58
RFFL-209ENST00000581265 BRSK2Q8IWQ3 736 aa11.41□□□□□ -0.58
RFFL-209ENST00000581265 TMEM86AQ8N2M4 240 aa11.41□□□□□ -0.58
RFFL-209ENST00000581265 PDCL2Q8N4E4 241 aa11.41□□□□□ -0.58
RFFL-209ENST00000581265 MAB21L3Q8N8X9 362 aa11.41□□□□□ -0.58
RFFL-209ENST00000581265 CXorf38Q8TB03 319 aa11.41□□□□□ -0.58
RFFL-209ENST00000581265 SPATA18Q8TC71 538 aa11.41□□□□□ -0.58
RFFL-209ENST00000581265 CACTINQ8WUQ7 758 aaKnown RBP11.41□□□□□ -0.58
RFFL-209ENST00000581265 LEO1Q8WVC0 666 aaPredicted RBP11.41□□□□□ -0.58
RFFL-209ENST00000581265 USP13Q92995 863 aaPredicted RBP11.41□□□□□ -0.58
RFFL-209ENST00000581265 ZNF560Q96MR9 790 aa11.41□□□□□ -0.58
RFFL-209ENST00000581265 FAM213AQ9BRX8 229 aa11.41□□□□□ -0.58
RFFL-209ENST00000581265 ABCB6Q9NP58 842 aa11.41□□□□□ -0.58
RFFL-209ENST00000581265 HPS4Q9NQG7 708 aa11.41□□□□□ -0.58
RFFL-209ENST00000581265 TDP1Q9NUW8 608 aa11.41□□□□□ -0.58
RFFL-209ENST00000581265 GDAP2Q9NXN4 497 aa11.41□□□□□ -0.58
RFFL-209ENST00000581265 AGAP1Q9UPQ3 857 aa11.41□□□□□ -0.58
RFFL-209ENST00000581265 CCL26Q9Y258 94 aa11.41□□□□□ -0.58
RFFL-209ENST00000581265 CNOT1A5YKK6 2376 aaKnown RBP11.4□□□□□ -0.58
RFFL-209ENST00000581265 FRMD3A2A2Y4 597 aa11.4□□□□□ -0.58
RFFL-209ENST00000581265 OTOL1A6NHN0 477 aaPredicted RBP11.4□□□□□ -0.58
RFFL-209ENST00000581265 HUS1O60921 280 aa11.4□□□□□ -0.58
RFFL-209ENST00000581265 PRPF40AO75400 957 aaKnown RBP11.4□□□□□ -0.58
RFFL-209ENST00000581265 ITGB3P05106 788 aa11.4□□□□□ -0.58
RFFL-209ENST00000581265 POLR2BP30876 1174 aaKnown RBP11.4□□□□□ -0.58
RFFL-209ENST00000581265 RPL10AP62906 217 aaKnown RBP11.4□□□□□ -0.58
RFFL-209ENST00000581265 AMPD2Q01433 879 aa11.4□□□□□ -0.58
RFFL-209ENST00000581265 BFSP1Q12934 665 aa11.4□□□□□ -0.58
RFFL-209ENST00000581265 SRSF5Q13243 272 aaKnown RBP11.4□□□□□ -0.58
RFFL-209ENST00000581265 ALCAMQ13740 583 aa11.4□□□□□ -0.58
RFFL-209ENST00000581265 ZNF268Q14587 947 aaPredicted RBP11.4□□□□□ -0.58
RFFL-209ENST00000581265 TXNDC8Q6A555 127 aa11.4□□□□□ -0.58
RFFL-209ENST00000581265 HEATR6Q6AI08 1181 aaKnown RBP11.4□□□□□ -0.58
RFFL-209ENST00000581265 CCDC73Q6ZRK6 1079 aa11.4□□□□□ -0.58
RFFL-209ENST00000581265 CEP68Q76N32 757 aa11.4□□□□□ -0.58
RFFL-209ENST00000581265 WDR5BQ86VZ2 330 aa11.4□□□□□ -0.58
RFFL-209ENST00000581265 CSGALNACT2Q8N6G5 542 aa11.4□□□□□ -0.58
RFFL-209ENST00000581265 LRRC52Q8N7C0 313 aa11.4□□□□□ -0.58
RFFL-209ENST00000581265 C1orf127Q8N9H9 656 aa11.4□□□□□ -0.58
RFFL-209ENST00000581265 ZSWIM2Q8NEG5 633 aa11.4□□□□□ -0.58
RFFL-209ENST00000581265 MRPS31Q92665 395 aaKnown RBP11.4□□□□□ -0.58
RFFL-209ENST00000581265 CHFRQ96EP1 664 aa11.4□□□□□ -0.58
RFFL-209ENST00000581265 MYRFLQ96LU7 910 aa11.4□□□□□ -0.58
RFFL-209ENST00000581265 CLIC6Q96NY7 704 aa11.4□□□□□ -0.58
RFFL-209ENST00000581265 PKMYT1Q99640 499 aa11.4□□□□□ -0.58
RFFL-209ENST00000581265 PI4K2AQ9BTU6 479 aa11.4□□□□□ -0.58
RFFL-209ENST00000581265 KIF9Q9HAQ2 790 aa11.4□□□□□ -0.58
RFFL-209ENST00000581265 TBC1D7Q9P0N9 293 aa11.4□□□□□ -0.58
RFFL-209ENST00000581265 L1RE1Q9UN81 338 aa11.4□□□□□ -0.58
RFFL-209ENST00000581265 MORC2Q9Y6X9 1032 aaPredicted RBP11.4□□□□□ -0.58
RFFL-209ENST00000581265 NUP210Q8TEM1 1887 aaPredicted RBP11.4□□□□□ -0.59
RFFL-209ENST00000581265 FAM208BQ5VWN6 2430 aa11.39□□□□□ -0.59
RFFL-209ENST00000581265 VPS37CA5D8V6 355 aaPredicted RBP11.39□□□□□ -0.59
RFFL-209ENST00000581265 C1QTNF9BB2RNN3 333 aa11.39□□□□□ -0.59
RFFL-209ENST00000581265 GABRDO14764 452 aa11.39□□□□□ -0.59
RFFL-209ENST00000581265 EXTL3O43909 919 aa11.39□□□□□ -0.59
RFFL-209ENST00000581265 ATG13O75143 517 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 110.5 ms