RNA–Protein interactions for RNA: ENST00000581224.5

TRIM16-222, Transcript of tripartite motif containing 16, human

TSL 3

Gene TRIM16, Length 815 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRIM16-222	ENST00000581224	CRYBG2	Q8N1P7	616 aa		10.5	□□□□□ -0.73
TRIM16-222	ENST00000581224	C1orf131	Q8NDD1	294 aa	Known RBP	10.5	□□□□□ -0.73
TRIM16-222	ENST00000581224	EXD1	Q8NHP7	514 aa		10.5	□□□□□ -0.73
TRIM16-222	ENST00000581224	GRK7	Q8WTQ7	553 aa		10.5	□□□□□ -0.73
TRIM16-222	ENST00000581224	UROC1	Q96N76	676 aa		10.5	□□□□□ -0.73
TRIM16-222	ENST00000581224	KRT12	Q99456	494 aa		10.5	□□□□□ -0.73
TRIM16-222	ENST00000581224	EIF2A	Q9BY44	585 aa	Known RBP	10.5	□□□□□ -0.73
TRIM16-222	ENST00000581224	FRMD8P1	Q9BZ68	369 aa	Predicted RBP	10.5	□□□□□ -0.73
TRIM16-222	ENST00000581224	TSPYL1	Q9H0U9	437 aa		10.5	□□□□□ -0.73
TRIM16-222	ENST00000581224	FAM105A	Q9NUU6	356 aa		10.5	□□□□□ -0.73
TRIM16-222	ENST00000581224	L1RE1	Q9UN81	338 aa		10.5	□□□□□ -0.73
TRIM16-222	ENST00000581224	POLI	Q9UNA4	740 aa		10.5	□□□□□ -0.73
TRIM16-222	ENST00000581224	ST3GAL5	Q9UNP4	418 aa		10.5	□□□□□ -0.73
TRIM16-222	ENST00000581224	SNX9	Q9Y5X1	595 aa		10.5	□□□□□ -0.73
TRIM16-222	ENST00000581224	SART1	O43290	800 aa	Known RBP	10.49	□□□□□ -0.73
TRIM16-222	ENST00000581224	PHF2	O75151	1096 aa		10.49	□□□□□ -0.73
TRIM16-222	ENST00000581224	TH	P07101	528 aa		10.49	□□□□□ -0.73
TRIM16-222	ENST00000581224	RDX	P35241	583 aa	Known RBP	10.49	□□□□□ -0.73
TRIM16-222	ENST00000581224	GNL1	P36915	607 aa	Predicted RBP	10.49	□□□□□ -0.73
TRIM16-222	ENST00000581224	SCNN1A	P37088	669 aa		10.49	□□□□□ -0.73
TRIM16-222	ENST00000581224	THPO	P40225	353 aa		10.49	□□□□□ -0.73
TRIM16-222	ENST00000581224	LHX1	P48742	406 aa		10.49	□□□□□ -0.73
TRIM16-222	ENST00000581224	FNTA	P49354	379 aa		10.49	□□□□□ -0.73
TRIM16-222	ENST00000581224	NDST1	P52848	882 aa		10.49	□□□□□ -0.73
TRIM16-222	ENST00000581224	ACLY	P53396	1101 aa		10.49	□□□□□ -0.73
TRIM16-222	ENST00000581224	CDH8	P55286	799 aa		10.49	□□□□□ -0.73
TRIM16-222	ENST00000581224	ZNF200	P98182	395 aa	Predicted RBP	10.49	□□□□□ -0.73
TRIM16-222	ENST00000581224	NFX1	Q12986	1120 aa	Known RBP	10.49	□□□□□ -0.73
TRIM16-222	ENST00000581224	CEP128	Q6ZU80	1094 aa		10.49	□□□□□ -0.73
TRIM16-222	ENST00000581224	PASD1	Q8IV76	773 aa		10.49	□□□□□ -0.73
TRIM16-222	ENST00000581224	DEFB118	Q96PH6	123 aa		10.49	□□□□□ -0.73
TRIM16-222	ENST00000581224	PNKP	Q96T60	521 aa		10.49	□□□□□ -0.73
TRIM16-222	ENST00000581224	FTHL17	Q9BXU8	183 aa		10.49	□□□□□ -0.73
TRIM16-222	ENST00000581224	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	10.49	□□□□□ -0.73
TRIM16-222	ENST00000581224	NXF3	Q9H4D5	531 aa	Known RBP	10.49	□□□□□ -0.73
TRIM16-222	ENST00000581224	SMYD3	Q9H7B4	428 aa		10.49	□□□□□ -0.73
TRIM16-222	ENST00000581224	GDF3	Q9NR23	364 aa		10.49	□□□□□ -0.73
TRIM16-222	ENST00000581224	TMEM51	Q9NW97	253 aa		10.49	□□□□□ -0.73
TRIM16-222	ENST00000581224	ASNSD1	Q9NWL6	643 aa		10.49	□□□□□ -0.73
TRIM16-222	ENST00000581224	EFR3B	Q9Y2G0	817 aa		10.49	□□□□□ -0.73
TRIM16-222	ENST00000581224	MYADML2	A6NDP7	307 aa		10.48	□□□□□ -0.73
TRIM16-222	ENST00000581224		A8MXQ7	604 aa		10.48	□□□□□ -0.73
TRIM16-222	ENST00000581224	KBTBD13	C9JR72	458 aa		10.48	□□□□□ -0.73
TRIM16-222	ENST00000581224		M0QYV0	167 aa		10.48	□□□□□ -0.73
TRIM16-222	ENST00000581224		O00370	1275 aa		10.48	□□□□□ -0.73
TRIM16-222	ENST00000581224	FSCN2	O14926	492 aa		10.48	□□□□□ -0.73
TRIM16-222	ENST00000581224	MICAL2	O94851	1124 aa		10.48	□□□□□ -0.73
TRIM16-222	ENST00000581224	HEXIM1	O94992	359 aa	Known RBP	10.48	□□□□□ -0.73
TRIM16-222	ENST00000581224	TJP3	O95049	919 aa		10.48	□□□□□ -0.73
TRIM16-222	ENST00000581224	EOMES	O95936	686 aa		10.48	□□□□□ -0.73
TRIM16-222	ENST00000581224	TFRC	P02786	760 aa	Known RBP	10.48	□□□□□ -0.73
TRIM16-222	ENST00000581224	COL6A1	P12109	1028 aa		10.48	□□□□□ -0.73
TRIM16-222	ENST00000581224	CCND3	P30281	292 aa	Predicted RBP	10.48	□□□□□ -0.73
TRIM16-222	ENST00000581224	PSMC1	P62191	440 aa	Known RBP	10.48	□□□□□ -0.73
TRIM16-222	ENST00000581224	DR1	Q01658	176 aa		10.48	□□□□□ -0.73
TRIM16-222	ENST00000581224	MGAT3	Q09327	533 aa		10.48	□□□□□ -0.73
TRIM16-222	ENST00000581224	HIC1	Q14526	733 aa		10.48	□□□□□ -0.73
TRIM16-222	ENST00000581224	CYP1B1	Q16678	543 aa		10.48	□□□□□ -0.73
TRIM16-222	ENST00000581224	ALS2CL	Q60I27	953 aa		10.48	□□□□□ -0.73
TRIM16-222	ENST00000581224	ARC	Q7LC44	396 aa		10.48	□□□□□ -0.73
TRIM16-222	ENST00000581224	DNAAF5	Q86Y56	855 aa		10.48	□□□□□ -0.73
TRIM16-222	ENST00000581224	SLC13A5	Q86YT5	568 aa	Predicted RBP	10.48	□□□□□ -0.73
TRIM16-222	ENST00000581224	C12orf50	Q8NA57	414 aa	Predicted RBP	10.48	□□□□□ -0.73
TRIM16-222	ENST00000581224	SMG8	Q8ND04	991 aa	Known RBP	10.48	□□□□□ -0.73
TRIM16-222	ENST00000581224	OR6B3	Q8NGW1	331 aa		10.48	□□□□□ -0.73
TRIM16-222	ENST00000581224	CCHCR1	Q8TD31	782 aa		10.48	□□□□□ -0.73
TRIM16-222	ENST00000581224	TMEM40	Q8WWA1	233 aa		10.48	□□□□□ -0.73
TRIM16-222	ENST00000581224	TFAP2B	Q92481	460 aa		10.48	□□□□□ -0.73
TRIM16-222	ENST00000581224	CAVIN3	Q969G5	261 aa		10.48	□□□□□ -0.73
TRIM16-222	ENST00000581224	LRRC45	Q96CN5	670 aa		10.48	□□□□□ -0.73
TRIM16-222	ENST00000581224	ZMAT2	Q96NC0	199 aa	Known RBP	10.48	□□□□□ -0.73
TRIM16-222	ENST00000581224	APOL6	Q9BWW8	343 aa		10.48	□□□□□ -0.73
TRIM16-222	ENST00000581224	FUT8	Q9BYC5	575 aa		10.48	□□□□□ -0.73
TRIM16-222	ENST00000581224	ELOVL4	Q9GZR5	314 aa		10.48	□□□□□ -0.73
TRIM16-222	ENST00000581224	TSPYL2	Q9H2G4	693 aa	Predicted RBP	10.48	□□□□□ -0.73
TRIM16-222	ENST00000581224	GOLPH3	Q9H4A6	298 aa		10.48	□□□□□ -0.73
TRIM16-222	ENST00000581224	EPB41L5	Q9HCM4	733 aa		10.48	□□□□□ -0.73
TRIM16-222	ENST00000581224	ERVK-5	Q9HDB9	667 aa		10.48	□□□□□ -0.73
TRIM16-222	ENST00000581224	MED4	Q9NPJ6	270 aa		10.48	□□□□□ -0.73
TRIM16-222	ENST00000581224	PCYOX1	Q9UHG3	505 aa		10.48	□□□□□ -0.73
TRIM16-222	ENST00000581224	DSE	Q9UL01	958 aa		10.48	□□□□□ -0.73
TRIM16-222	ENST00000581224		A0A0U1RQF3	1178 aa		10.47	□□□□□ -0.73
TRIM16-222	ENST00000581224	MAP2K7	O14733	419 aa		10.47	□□□□□ -0.73
TRIM16-222	ENST00000581224	MEFV	O15553	781 aa	Predicted RBP	10.47	□□□□□ -0.73
TRIM16-222	ENST00000581224	ATMIN	O43313	823 aa	Predicted RBP	10.47	□□□□□ -0.73
TRIM16-222	ENST00000581224	PARN	O95453	639 aa	Known RBP	10.47	□□□□□ -0.73
TRIM16-222	ENST00000581224	GAS8	O95995	478 aa		10.47	□□□□□ -0.73
TRIM16-222	ENST00000581224	CHRNA1	P02708	482 aa		10.47	□□□□□ -0.73
TRIM16-222	ENST00000581224	MYCN	P04198	464 aa	Predicted RBP	10.47	□□□□□ -0.73
TRIM16-222	ENST00000581224	ERBB2	P04626	1255 aa		10.47	□□□□□ -0.73
TRIM16-222	ENST00000581224	WARS	P23381	471 aa	Known RBP	10.47	□□□□□ -0.73
TRIM16-222	ENST00000581224	AKAP5	P24588	427 aa		10.47	□□□□□ -0.73
TRIM16-222	ENST00000581224	PTPN7	P35236	360 aa		10.47	□□□□□ -0.73
TRIM16-222	ENST00000581224	GPD2	P43304	727 aa		10.47	□□□□□ -0.73
TRIM16-222	ENST00000581224	SSR1	P43307	286 aa	Known RBP	10.47	□□□□□ -0.73
TRIM16-222	ENST00000581224	TNNT3	P45378	269 aa	Predicted RBP	10.47	□□□□□ -0.73
TRIM16-222	ENST00000581224	BCAT1	P54687	386 aa		10.47	□□□□□ -0.73
TRIM16-222	ENST00000581224	LILRA4	P59901	499 aa		10.47	□□□□□ -0.73
TRIM16-222	ENST00000581224	GUCY2D	Q02846	1103 aa		10.47	□□□□□ -0.73
TRIM16-222	ENST00000581224	MLLT1	Q03111	559 aa	Predicted RBP	10.47	□□□□□ -0.73

Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms