RNA–Protein interactions for RNA: ENST00000580541.1

SKA2-205, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-205ENST00000580541 RAB33AQ14088 237 aa15.19■□□□□ 0.02
SKA2-205ENST00000580541 ASIC2Q16515 512 aa15.19■□□□□ 0.02
SKA2-205ENST00000580541 PTPN21Q16825 1174 aa15.19■□□□□ 0.02
SKA2-205ENST00000580541 PLPP4Q5VZY2 271 aa15.19■□□□□ 0.02
SKA2-205ENST00000580541 FAM171BQ6P995 826 aa15.19■□□□□ 0.02
SKA2-205ENST00000580541 RTL10Q7L3V2 364 aa15.19■□□□□ 0.02
SKA2-205ENST00000580541 VPS36Q86VN1 386 aa15.19■□□□□ 0.02
SKA2-205ENST00000580541 OSTM1Q86WC4 334 aa15.19■□□□□ 0.02
SKA2-205ENST00000580541 ZNF677Q86XU0 584 aa15.19■□□□□ 0.02
SKA2-205ENST00000580541 SPATA2LQ8IUW3 424 aaPredicted RBP15.19■□□□□ 0.02
SKA2-205ENST00000580541 SLC4A11Q8NBS3 891 aa15.19■□□□□ 0.02
SKA2-205ENST00000580541 ZNF461Q8TAF7 563 aa15.19■□□□□ 0.02
SKA2-205ENST00000580541 SPPL2BQ8TCT7 592 aa15.19■□□□□ 0.02
SKA2-205ENST00000580541 BAP1Q92560 729 aa15.19■□□□□ 0.02
SKA2-205ENST00000580541 CYFIP2Q96F07 1278 aa15.19■□□□□ 0.02
SKA2-205ENST00000580541 FUBP3Q96I24 572 aaKnown RBP eCLIP15.19■□□□□ 0.02
SKA2-205ENST00000580541 CDCA3Q99618 268 aaPredicted RBP15.19■□□□□ 0.02
SKA2-205ENST00000580541 CLSTN3Q9BQT9 956 aa15.19■□□□□ 0.02
SKA2-205ENST00000580541 PDCL3Q9H2J4 239 aa15.19■□□□□ 0.02
SKA2-205ENST00000580541 HSFX1Q9UBD0 423 aa15.19■□□□□ 0.02
SKA2-205ENST00000580541 HESX1Q9UBX0 185 aa15.19■□□□□ 0.02
SKA2-205ENST00000580541 CEP83Q9Y592 693 aa15.19■□□□□ 0.02
SKA2-205ENST00000580541 PCDHB5Q9Y5E4 795 aa15.19■□□□□ 0.02
SKA2-205ENST00000580541 VWA8A3KMH1 1905 aa15.18■□□□□ 0.02
SKA2-205ENST00000580541 GFPT2O94808 682 aa15.18■□□□□ 0.02
SKA2-205ENST00000580541 CNPP09543 421 aaKnown RBP15.18■□□□□ 0.02
SKA2-205ENST00000580541 ACAT1P24752 427 aaKnown RBP15.18■□□□□ 0.02
SKA2-205ENST00000580541 DNAJB1P25685 340 aa15.18■□□□□ 0.02
SKA2-205ENST00000580541 GNA15P30679 374 aa15.18■□□□□ 0.02
SKA2-205ENST00000580541 TUFMP49411 452 aaKnown RBP15.18■□□□□ 0.02
SKA2-205ENST00000580541 ZNF132P52740 706 aa15.18■□□□□ 0.02
SKA2-205ENST00000580541 TBX2Q13207 712 aaPredicted RBP15.18■□□□□ 0.02
SKA2-205ENST00000580541 CNGA2Q16280 664 aa15.18■□□□□ 0.02
SKA2-205ENST00000580541 SLC39A12Q504Y0 691 aa15.18■□□□□ 0.02
SKA2-205ENST00000580541 WHAMMQ8TF30 809 aa15.18■□□□□ 0.02
SKA2-205ENST00000580541 GDPD5Q8WTR4 605 aa15.18■□□□□ 0.02
SKA2-205ENST00000580541 KLHL5Q96PQ7 755 aa15.18■□□□□ 0.02
SKA2-205ENST00000580541 GAS2L1Q99501 681 aaPredicted RBP15.18■□□□□ 0.02
SKA2-205ENST00000580541 RTP3Q9BQQ7 232 aa15.18■□□□□ 0.02
SKA2-205ENST00000580541 MED10Q9BTT4 135 aa15.18■□□□□ 0.02
SKA2-205ENST00000580541 ELOVL4Q9GZR5 314 aa15.18■□□□□ 0.02
SKA2-205ENST00000580541 TLE6Q9H808 572 aa15.18■□□□□ 0.02
SKA2-205ENST00000580541 ABCB6Q9NP58 842 aa15.18■□□□□ 0.02
SKA2-205ENST00000580541 AFF4Q9UHB7 1163 aaKnown RBP15.18■□□□□ 0.02
SKA2-205ENST00000580541 GTF3C4Q9UKN8 822 aa15.18■□□□□ 0.02
SKA2-205ENST00000580541 PLXNA4Q9HCM2 1894 aa15.18■□□□□ 0.02
SKA2-205ENST00000580541 LRRC53A6NM62 1247 aa15.17■□□□□ 0.02
SKA2-205ENST00000580541 TEX28O15482 410 aa15.17■□□□□ 0.02
SKA2-205ENST00000580541 THAP12O43422 761 aa15.17■□□□□ 0.02
SKA2-205ENST00000580541 NCK2O43639 380 aa15.17■□□□□ 0.02
SKA2-205ENST00000580541 NRDCO43847 1150 aa15.17■□□□□ 0.02
SKA2-205ENST00000580541 SRGAP2BP0DMP2 458 aa15.17■□□□□ 0.02
SKA2-205ENST00000580541 CLCN1P35523 988 aa15.17■□□□□ 0.02
SKA2-205ENST00000580541 SNX16P57768 344 aa15.17■□□□□ 0.02
SKA2-205ENST00000580541 CYP27A1Q02318 531 aa15.17■□□□□ 0.02
SKA2-205ENST00000580541 ARID5AQ03989 594 aa15.17■□□□□ 0.02
SKA2-205ENST00000580541 MDH1BQ5I0G3 518 aa15.17■□□□□ 0.02
SKA2-205ENST00000580541 HABP4Q5JVS0 413 aaKnown RBP15.17■□□□□ 0.02
SKA2-205ENST00000580541 ARHGAP17Q68EM7 881 aa15.17■□□□□ 0.02
SKA2-205ENST00000580541 VSTM1Q6UX27 236 aa15.17■□□□□ 0.02
SKA2-205ENST00000580541 SPRED2Q7Z698 418 aa15.17■□□□□ 0.02
SKA2-205ENST00000580541 OR10T2Q8NGX3 314 aa15.17■□□□□ 0.02
SKA2-205ENST00000580541 AUTS2Q8WXX7 1259 aa15.17■□□□□ 0.02
SKA2-205ENST00000580541 HNRNPABQ99729 332 aaKnown RBP15.17■□□□□ 0.02
SKA2-205ENST00000580541 GPR88Q9GZN0 384 aa15.17■□□□□ 0.02
SKA2-205ENST00000580541 MYBPHLA2RUH7 354 aa15.16■□□□□ 0.02
SKA2-205ENST00000580541 RNF225M0QZC1 329 aaPredicted RBP15.16■□□□□ 0.02
SKA2-205ENST00000580541 MFAP3LO75121 409 aa15.16■□□□□ 0.02
SKA2-205ENST00000580541 ABLIM3O94929 683 aa15.16■□□□□ 0.02
SKA2-205ENST00000580541 GLUD1P00367 558 aa15.16■□□□□ 0.02
SKA2-205ENST00000580541 SERPING1P05155 500 aa15.16■□□□□ 0.02
SKA2-205ENST00000580541 ATF2P15336 505 aa15.16■□□□□ 0.02
SKA2-205ENST00000580541 CYP11B1P15538 503 aa15.16■□□□□ 0.02
SKA2-205ENST00000580541 POU3F3P20264 500 aaPredicted RBP15.16■□□□□ 0.02
SKA2-205ENST00000580541 HNRNPH3P31942 346 aaKnown RBP15.16■□□□□ 0.02
SKA2-205ENST00000580541 FXR1P51114 621 aaKnown RBP eCLIP15.16■□□□□ 0.02
SKA2-205ENST00000580541 PSMC1P62191 440 aaKnown RBP15.16■□□□□ 0.02
SKA2-205ENST00000580541 ROR1Q01973 937 aa15.16■□□□□ 0.02
SKA2-205ENST00000580541 KLHL30Q0D2K2 578 aa15.16■□□□□ 0.02
SKA2-205ENST00000580541 CAMK1Q14012 370 aa15.16■□□□□ 0.02
SKA2-205ENST00000580541 MEA1Q16626 185 aa15.16■□□□□ 0.02
SKA2-205ENST00000580541 CFAP221Q4G0U5 840 aa15.16■□□□□ 0.02
SKA2-205ENST00000580541 PPP1R2P3Q6NXS1 205 aa15.16■□□□□ 0.02
SKA2-205ENST00000580541 CCDC149Q6ZUS6 474 aa15.16■□□□□ 0.02
SKA2-205ENST00000580541 SPC24Q8NBT2 197 aa15.16■□□□□ 0.02
SKA2-205ENST00000580541 HDAC7Q8WUI4 952 aa15.16■□□□□ 0.02
SKA2-205ENST00000580541 ZNF606Q8WXB4 792 aa15.16■□□□□ 0.02
SKA2-205ENST00000580541 CEP295NLQ96MC4 621 aa15.16■□□□□ 0.02
SKA2-205ENST00000580541 PANX2Q96RD6 677 aa15.16■□□□□ 0.02
SKA2-205ENST00000580541 DNAJC7Q99615 494 aa15.16■□□□□ 0.02
SKA2-205ENST00000580541 DPEP3Q9H4B8 488 aa15.16■□□□□ 0.02
SKA2-205ENST00000580541 PLEKHA4Q9H4M7 779 aa15.16■□□□□ 0.02
SKA2-205ENST00000580541 PRDM12Q9H4Q4 367 aa15.16■□□□□ 0.02
SKA2-205ENST00000580541 NSUN3Q9H649 340 aaKnown RBP15.16■□□□□ 0.02
SKA2-205ENST00000580541 AJAP1Q9UKB5 411 aaPredicted RBP15.16■□□□□ 0.02
SKA2-205ENST00000580541 HIDE1A8MVS5 230 aa15.15■□□□□ 0.02
SKA2-205ENST00000580541 PRRG1O14668 218 aa15.15■□□□□ 0.02
SKA2-205ENST00000580541 ATP2C2O75185 946 aa15.15■□□□□ 0.02
SKA2-205ENST00000580541 FAM200BP0CF97 657 aa15.15■□□□□ 0.02
SKA2-205ENST00000580541 RPL17P18621 184 aaKnown RBP15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms