RNA–Protein interactions for RNA: ENST00000579716.2

COPS3-216, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 419 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-216ENST00000579716 PLS1Q14651 629 aa6.97□□□□□ -1.29
COPS3-216ENST00000579716 LLGL1Q15334 1064 aa6.97□□□□□ -1.29
COPS3-216ENST00000579716 CCDC85BQ15834 202 aaPredicted RBP6.97□□□□□ -1.29
COPS3-216ENST00000579716 INAVAQ3KP66 663 aa6.97□□□□□ -1.29
COPS3-216ENST00000579716 HSP90AA5PQ58FG0 334 aa6.97□□□□□ -1.29
COPS3-216ENST00000579716 SNAP47Q5SQN1 464 aa6.97□□□□□ -1.29
COPS3-216ENST00000579716 PTRH1Q86Y79 214 aaKnown RBP6.97□□□□□ -1.29
COPS3-216ENST00000579716 RAB11FIP4Q86YS3 637 aa6.97□□□□□ -1.29
COPS3-216ENST00000579716 MAML2Q8IZL2 1156 aaPredicted RBP6.97□□□□□ -1.29
COPS3-216ENST00000579716 FAM71DQ8N9W8 422 aa6.97□□□□□ -1.29
COPS3-216ENST00000579716 OR2W6PQ8NHA6 318 aa6.97□□□□□ -1.29
COPS3-216ENST00000579716 FBXO27Q8NI29 283 aa6.97□□□□□ -1.29
COPS3-216ENST00000579716 CEP76Q8TAP6 659 aa6.97□□□□□ -1.29
COPS3-216ENST00000579716 DNAAF4Q8WXU2 420 aa6.97□□□□□ -1.29
COPS3-216ENST00000579716 SMARCE1Q969G3 411 aa6.97□□□□□ -1.29
COPS3-216ENST00000579716 OSBP2Q969R2 916 aa6.97□□□□□ -1.29
COPS3-216ENST00000579716 NCLNQ969V3 563 aa6.97□□□□□ -1.29
COPS3-216ENST00000579716 ACSF2Q96CM8 615 aaPredicted RBP6.97□□□□□ -1.29
COPS3-216ENST00000579716 RBM17Q96I25 401 aaKnown RBP6.97□□□□□ -1.29
COPS3-216ENST00000579716 VPS50Q96JG6 964 aa6.97□□□□□ -1.29
COPS3-216ENST00000579716 COX4I2Q96KJ9 171 aa6.97□□□□□ -1.29
COPS3-216ENST00000579716 KCNC2Q96PR1 638 aa6.97□□□□□ -1.29
COPS3-216ENST00000579716 CDC6Q99741 560 aa6.97□□□□□ -1.29
COPS3-216ENST00000579716 TXN2Q99757 166 aa6.97□□□□□ -1.29
COPS3-216ENST00000579716 CITED2Q99967 270 aaPredicted RBP6.97□□□□□ -1.29
COPS3-216ENST00000579716 SGPP1Q9BX95 441 aa6.97□□□□□ -1.29
COPS3-216ENST00000579716 AGXT2Q9BYV1 514 aa6.97□□□□□ -1.29
COPS3-216ENST00000579716 ACPTQ9BZG2 426 aa6.97□□□□□ -1.29
COPS3-216ENST00000579716 NYXQ9GZU5 481 aa6.97□□□□□ -1.29
COPS3-216ENST00000579716 SERHL2Q9H4I8 314 aa6.97□□□□□ -1.29
COPS3-216ENST00000579716 MMRN2Q9H8L6 949 aa6.97□□□□□ -1.29
COPS3-216ENST00000579716 RRAGDQ9NQL2 400 aaPredicted RBP6.97□□□□□ -1.29
COPS3-216ENST00000579716 KRT84Q9NSB2 600 aa6.97□□□□□ -1.29
COPS3-216ENST00000579716 TAS2R3Q9NYW6 316 aa6.97□□□□□ -1.29
COPS3-216ENST00000579716 EMC3Q9P0I2 261 aa6.97□□□□□ -1.29
COPS3-216ENST00000579716 ACTR3BQ9P1U1 418 aa6.97□□□□□ -1.29
COPS3-216ENST00000579716 CROTQ9UKG9 612 aa6.97□□□□□ -1.29
COPS3-216ENST00000579716 CNOT6Q9ULM6 557 aaKnown RBP6.97□□□□□ -1.29
COPS3-216ENST00000579716 SPO11Q9Y5K1 396 aa6.97□□□□□ -1.29
COPS3-216ENST00000579716 USP19O94966 1318 aa6.97□□□□□ -1.29
COPS3-216ENST00000579716 PASKQ96RG2 1323 aa6.97□□□□□ -1.29
COPS3-216ENST00000579716 A0A1W2PPL8 197 aa6.96□□□□□ -1.3
COPS3-216ENST00000579716 TISP43B9A030 160 aa6.96□□□□□ -1.3
COPS3-216ENST00000579716 B9A039 149 aa6.96□□□□□ -1.3
COPS3-216ENST00000579716 FZD9O00144 591 aa6.96□□□□□ -1.3
COPS3-216ENST00000579716 EXTL3O43909 919 aa6.96□□□□□ -1.3
COPS3-216ENST00000579716 MGEA5O60502 916 aa6.96□□□□□ -1.3
COPS3-216ENST00000579716 LRRN2O75325 713 aa6.96□□□□□ -1.3
COPS3-216ENST00000579716 ALDH1A2O94788 518 aa6.96□□□□□ -1.3
COPS3-216ENST00000579716 CFBP00751 764 aa6.96□□□□□ -1.3
COPS3-216ENST00000579716 POLR2MP0CAP2 368 aa6.96□□□□□ -1.3
COPS3-216ENST00000579716 AKAP5P24588 427 aa6.96□□□□□ -1.3
COPS3-216ENST00000579716 DNAJB1P25685 340 aa6.96□□□□□ -1.3
COPS3-216ENST00000579716 CTNNA2P26232 953 aa6.96□□□□□ -1.3
COPS3-216ENST00000579716 IDUAP35475 653 aa6.96□□□□□ -1.3
COPS3-216ENST00000579716 AP3M2P53677 418 aa6.96□□□□□ -1.3
COPS3-216ENST00000579716 CACNB3P54284 484 aa6.96□□□□□ -1.3
COPS3-216ENST00000579716 PLTPP55058 493 aa6.96□□□□□ -1.3
COPS3-216ENST00000579716 HADHBP55084 474 aaKnown RBP6.96□□□□□ -1.3
COPS3-216ENST00000579716 TGFB2P61812 414 aa6.96□□□□□ -1.3
COPS3-216ENST00000579716 KRT85P78386 507 aa6.96□□□□□ -1.3
COPS3-216ENST00000579716 SMAD1Q15797 465 aaKnown RBP6.96□□□□□ -1.3
COPS3-216ENST00000579716 SEZ6Q53EL9 994 aa6.96□□□□□ -1.3
COPS3-216ENST00000579716 C1orf141Q5JVX7 400 aa6.96□□□□□ -1.3
COPS3-216ENST00000579716 IZUMO3Q5VZ72 239 aa6.96□□□□□ -1.3
COPS3-216ENST00000579716 KANK2Q63ZY3 851 aa6.96□□□□□ -1.3
COPS3-216ENST00000579716 DARS2Q6PI48 645 aaKnown RBP6.96□□□□□ -1.3
COPS3-216ENST00000579716 ZYG11AQ6WRX3 759 aa6.96□□□□□ -1.3
COPS3-216ENST00000579716 ZNF804AQ7Z570 1209 aa6.96□□□□□ -1.3
COPS3-216ENST00000579716 MCATQ8IVS2 390 aaKnown RBP6.96□□□□□ -1.3
COPS3-216ENST00000579716 SYTL1Q8IYJ3 562 aa6.96□□□□□ -1.3
COPS3-216ENST00000579716 ANKRD35Q8N283 1001 aa6.96□□□□□ -1.3
COPS3-216ENST00000579716 TSPYL6Q8N831 410 aa6.96□□□□□ -1.3
COPS3-216ENST00000579716 ANKS4BQ8N8V4 417 aa6.96□□□□□ -1.3
COPS3-216ENST00000579716 IFI44Q8TCB0 444 aa6.96□□□□□ -1.3
COPS3-216ENST00000579716 ADAMTS15Q8TE58 950 aa6.96□□□□□ -1.3
COPS3-216ENST00000579716 PIGOQ8TEQ8 1089 aa6.96□□□□□ -1.3
COPS3-216ENST00000579716 KRT35Q92764 455 aa6.96□□□□□ -1.3
COPS3-216ENST00000579716 KIAA1191Q96A73 305 aa6.96□□□□□ -1.3
COPS3-216ENST00000579716 NSUN4Q96CB9 384 aaKnown RBP6.96□□□□□ -1.3
COPS3-216ENST00000579716 THOC1Q96FV9 657 aaKnown RBP6.96□□□□□ -1.3
COPS3-216ENST00000579716 FAXDC2Q96IV6 333 aa6.96□□□□□ -1.3
COPS3-216ENST00000579716 CNOT6LQ96LI5 555 aaKnown RBP6.96□□□□□ -1.3
COPS3-216ENST00000579716 THUMPD2Q9BTF0 503 aaKnown RBP6.96□□□□□ -1.3
COPS3-216ENST00000579716 GPR62Q9BZJ7 368 aa6.96□□□□□ -1.3
COPS3-216ENST00000579716 THAP9Q9H5L6 903 aa6.96□□□□□ -1.3
COPS3-216ENST00000579716 XKR8Q9H6D3 395 aa6.96□□□□□ -1.3
COPS3-216ENST00000579716 ZNF552Q9H707 407 aaPredicted RBP6.96□□□□□ -1.3
COPS3-216ENST00000579716 PSTPIP2Q9H939 334 aa6.96□□□□□ -1.3
COPS3-216ENST00000579716 PREBQ9HCU5 417 aa6.96□□□□□ -1.3
COPS3-216ENST00000579716 IARS2Q9NSE4 1012 aaKnown RBP6.96□□□□□ -1.3
COPS3-216ENST00000579716 FAM153AQ9UHL3 310 aa6.96□□□□□ -1.3
COPS3-216ENST00000579716 RPS6KA6Q9UK32 745 aa6.96□□□□□ -1.3
COPS3-216ENST00000579716 ZMYND8Q9ULU4 1186 aaPredicted RBP6.96□□□□□ -1.3
COPS3-216ENST00000579716 ARHGAP26Q9UNA1 814 aa6.96□□□□□ -1.3
COPS3-216ENST00000579716 MAGED2Q9UNF1 606 aaPredicted RBP6.96□□□□□ -1.3
COPS3-216ENST00000579716 ZNF281Q9Y2X9 895 aa6.96□□□□□ -1.3
COPS3-216ENST00000579716 CAPN7Q9Y6W3 813 aa6.96□□□□□ -1.3
COPS3-216ENST00000579716 LOC100653049A0A140TA62 436 aa6.95□□□□□ -1.3
COPS3-216ENST00000579716 IQANK1A0A1B0GTG1 560 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms