RNA–Protein interactions for RNA: ENST00000579483.1

MSI2-209, Transcript of musashi RNA binding protein 2, humanhuman

TSL 1 (best)

Gene MSI2, Length 5,141 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-209ENST00000579483 DDX20Q9UHI6 824 aaKnown RBP10.68□□□□□ -0.7
MSI2-209ENST00000579483 BARX2Q9UMQ3 279 aaPredicted RBP10.68□□□□□ -0.7
MSI2-209ENST00000579483 UBIAD1Q9Y5Z9 338 aa10.68□□□□□ -0.7
MSI2-209ENST00000579483 FAM208AQ9UK61 1670 aaKnown RBP10.68□□□□□ -0.7
MSI2-209ENST00000579483 CCL23P55773 120 aa10.68□□□□□ -0.7
MSI2-209ENST00000579483 OCRLQ01968 901 aa10.68□□□□□ -0.7
MSI2-209ENST00000579483 ILF2Q12905 390 aaKnown RBP10.68□□□□□ -0.7
MSI2-209ENST00000579483 ZNF284Q2VY69 593 aa10.68□□□□□ -0.7
MSI2-209ENST00000579483 SNF8Q96H20 258 aa10.68□□□□□ -0.7
MSI2-209ENST00000579483 TMEM176AQ96HP8 235 aa10.68□□□□□ -0.7
MSI2-209ENST00000579483 FGD4Q96M96 766 aa10.68□□□□□ -0.7
MSI2-209ENST00000579483 EFHD1Q9BUP0 239 aa10.68□□□□□ -0.7
MSI2-209ENST00000579483 FOXP3Q9BZS1 431 aa10.68□□□□□ -0.7
MSI2-209ENST00000579483 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.68□□□□□ -0.7
MSI2-209ENST00000579483 GIT1Q9Y2X7 761 aa10.68□□□□□ -0.7
MSI2-209ENST00000579483 KCNN4O15554 427 aa10.68□□□□□ -0.7
MSI2-209ENST00000579483 ATP8B1O43520 1251 aa10.68□□□□□ -0.7
MSI2-209ENST00000579483 TLR2O60603 784 aa10.68□□□□□ -0.7
MSI2-209ENST00000579483 CASP2P42575 452 aa10.68□□□□□ -0.7
MSI2-209ENST00000579483 GEMP55040 296 aa10.68□□□□□ -0.7
MSI2-209ENST00000579483 ALS2CLQ60I27 953 aa10.68□□□□□ -0.7
MSI2-209ENST00000579483 RASSF3Q86WH2 238 aa10.68□□□□□ -0.7
MSI2-209ENST00000579483 WDR75Q8IWA0 830 aaKnown RBP10.68□□□□□ -0.7
MSI2-209ENST00000579483 HPS3Q969F9 1004 aa10.68□□□□□ -0.7
MSI2-209ENST00000579483 SERPINB11Q96P15 392 aa10.68□□□□□ -0.7
MSI2-209ENST00000579483 CIPCQ9C0C6 399 aa10.68□□□□□ -0.7
MSI2-209ENST00000579483 A0A087WUV0 522 aaPredicted RBP10.67□□□□□ -0.7
MSI2-209ENST00000579483 SPATA31C2B4DYI2 1134 aa10.67□□□□□ -0.7
MSI2-209ENST00000579483 TMEM253P0C7T8 217 aa10.67□□□□□ -0.7
MSI2-209ENST00000579483 PDK2Q15119 407 aa10.67□□□□□ -0.7
MSI2-209ENST00000579483 PHLDB3Q6NSJ2 640 aa10.67□□□□□ -0.7
MSI2-209ENST00000579483 CTU1Q7Z7A3 348 aaKnown RBP10.67□□□□□ -0.7
MSI2-209ENST00000579483 ZC3H18Q86VM9 953 aaKnown RBP10.67□□□□□ -0.7
MSI2-209ENST00000579483 PORCNQ9H237 461 aa10.67□□□□□ -0.7
MSI2-209ENST00000579483 KDM4CQ9H3R0 1056 aa10.67□□□□□ -0.7
MSI2-209ENST00000579483 KLHL11Q9NVR0 708 aa10.67□□□□□ -0.7
MSI2-209ENST00000579483 ZFATQ9P243 1243 aa10.67□□□□□ -0.7
MSI2-209ENST00000579483 VPS28Q9UK41 221 aa10.67□□□□□ -0.7
MSI2-209ENST00000579483 PCDHGB4Q9UN71 923 aa10.67□□□□□ -0.7
MSI2-209ENST00000579483 STX7O15400 261 aaKnown RBP10.67□□□□□ -0.7
MSI2-209ENST00000579483 ATP5BP06576 529 aaKnown RBP10.67□□□□□ -0.7
MSI2-209ENST00000579483 NDUFV1P49821 464 aa10.67□□□□□ -0.7
MSI2-209ENST00000579483 EFEMP1Q12805 493 aa10.67□□□□□ -0.7
MSI2-209ENST00000579483 MDH1BQ5I0G3 518 aa10.67□□□□□ -0.7
MSI2-209ENST00000579483 KLHDC7AQ5VTJ3 777 aa10.67□□□□□ -0.7
MSI2-209ENST00000579483 CBWD2Q8IUF1 395 aa10.67□□□□□ -0.7
MSI2-209ENST00000579483 BRSK2Q8IWQ3 736 aa10.67□□□□□ -0.7
MSI2-209ENST00000579483 GPATCH11Q8N954 259 aa10.67□□□□□ -0.7
MSI2-209ENST00000579483 GDAP1L1Q96MZ0 367 aa10.67□□□□□ -0.7
MSI2-209ENST00000579483 INTS13Q9NVM9 706 aa10.67□□□□□ -0.7
MSI2-209ENST00000579483 FZD1Q9UP38 647 aa10.67□□□□□ -0.7
MSI2-209ENST00000579483 CLCA2Q9UQC9 943 aa10.67□□□□□ -0.7
MSI2-209ENST00000579483 CCDC160A6NGH7 325 aa10.67□□□□□ -0.7
MSI2-209ENST00000579483 CASQ2O14958 399 aaPredicted RBP10.67□□□□□ -0.7
MSI2-209ENST00000579483 CXCL8P10145 99 aa10.67□□□□□ -0.7
MSI2-209ENST00000579483 BRD2P25440 801 aaKnown RBP10.67□□□□□ -0.7
MSI2-209ENST00000579483 PTK6Q13882 451 aa10.67□□□□□ -0.7
MSI2-209ENST00000579483 TRADDQ15628 312 aa10.67□□□□□ -0.7
MSI2-209ENST00000579483 NAB2Q15742 525 aa10.67□□□□□ -0.7
MSI2-209ENST00000579483 UGT3A1Q6NUS8 523 aa10.67□□□□□ -0.7
MSI2-209ENST00000579483 CARNMT1Q8N4J0 409 aa10.67□□□□□ -0.7
MSI2-209ENST00000579483 OSCP1Q8WVF1 389 aa10.67□□□□□ -0.7
MSI2-209ENST00000579483 ASAH2Q9NR71 780 aa10.67□□□□□ -0.7
MSI2-209ENST00000579483 GTF3C4Q9UKN8 822 aa10.67□□□□□ -0.7
MSI2-209ENST00000579483 SMIM35A0A1B0GVV1 85 aa10.67□□□□□ -0.7
MSI2-209ENST00000579483 C2orf81A6NN90 581 aa10.67□□□□□ -0.7
MSI2-209ENST00000579483 PIK3R2O00459 728 aa10.67□□□□□ -0.7
MSI2-209ENST00000579483 CTDNEP1O95476 244 aa10.67□□□□□ -0.7
MSI2-209ENST00000579483 CCR1P32246 355 aa10.67□□□□□ -0.7
MSI2-209ENST00000579483 PTPN11Q06124 597 aaPredicted RBP10.67□□□□□ -0.7
MSI2-209ENST00000579483 TSNAXIP1Q2TAA8 658 aa10.67□□□□□ -0.7
MSI2-209ENST00000579483 PTRHD1Q6GMV3 140 aaKnown RBP10.67□□□□□ -0.7
MSI2-209ENST00000579483 VPS11Q9H270 941 aa10.67□□□□□ -0.7
MSI2-209ENST00000579483 AIPL1Q9NZN9 384 aa10.67□□□□□ -0.7
MSI2-209ENST00000579483 AFF4Q9UHB7 1163 aaKnown RBP10.67□□□□□ -0.7
MSI2-209ENST00000579483 CRLS1Q9UJA2 301 aa10.67□□□□□ -0.7
MSI2-209ENST00000579483 FOXN1O15353 648 aa10.66□□□□□ -0.7
MSI2-209ENST00000579483 PSEN1P49768 467 aa10.66□□□□□ -0.7
MSI2-209ENST00000579483 CRLF3Q8IUI8 442 aa10.66□□□□□ -0.7
MSI2-209ENST00000579483 TNFSF13BQ9Y275 285 aa10.66□□□□□ -0.7
MSI2-209ENST00000579483 ORC6Q9Y5N6 252 aa10.66□□□□□ -0.7
MSI2-209ENST00000579483 FRMPD4Q14CM0 1322 aa10.66□□□□□ -0.7
MSI2-209ENST00000579483 A0A1B0GTH6 734 aa10.66□□□□□ -0.7
MSI2-209ENST00000579483 ARHGAP10A1A4S6 786 aa10.66□□□□□ -0.7
MSI2-209ENST00000579483 ATP9BO43861 1147 aa10.66□□□□□ -0.7
MSI2-209ENST00000579483 SPAG6O75602 509 aa10.66□□□□□ -0.7
MSI2-209ENST00000579483 CSH1P0DML2 217 aa10.66□□□□□ -0.7
MSI2-209ENST00000579483 CSH2P0DML3 217 aa10.66□□□□□ -0.7
MSI2-209ENST00000579483 PDAP1Q13442 181 aaKnown RBP10.66□□□□□ -0.7
MSI2-209ENST00000579483 PRAMEF19Q5SWL8 479 aa10.66□□□□□ -0.7
MSI2-209ENST00000579483 PSRC1Q6PGN9 363 aaPredicted RBP10.66□□□□□ -0.7
MSI2-209ENST00000579483 AGXT2Q9BYV1 514 aa10.66□□□□□ -0.7
MSI2-209ENST00000579483 PPCSQ9HAB8 311 aa10.66□□□□□ -0.7
MSI2-209ENST00000579483 METTL5Q9NRN9 209 aaKnown RBP10.66□□□□□ -0.7
MSI2-209ENST00000579483 KBTBD4Q9NVX7 518 aa10.66□□□□□ -0.7
MSI2-209ENST00000579483 MRPS23Q9Y3D9 190 aaKnown RBP10.66□□□□□ -0.7
MSI2-209ENST00000579483 NCAM2O15394 837 aa10.66□□□□□ -0.7
MSI2-209ENST00000579483 GALCP54803 685 aa10.66□□□□□ -0.7
MSI2-209ENST00000579483 NBPF20Q3BBV1 942 aa10.66□□□□□ -0.7
MSI2-209ENST00000579483 ERAP2Q6P179 960 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms