RNA–Protein interactions for RNA: ENST00000578733.5

CDK5RAP3-210, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 578 nt, Biotype retained intron.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-210ENST00000578733 SLC8A3P57103 927 aa12□□□□□ -0.49
CDK5RAP3-210ENST00000578733 ZBED6P86452 979 aa12□□□□□ -0.49
CDK5RAP3-210ENST00000578733 PTK2Q05397 1052 aa12□□□□□ -0.49
CDK5RAP3-210ENST00000578733 DRAP1Q14919 205 aaPredicted RBP12□□□□□ -0.49
CDK5RAP3-210ENST00000578733 ZNF394Q53GI3 561 aa12□□□□□ -0.49
CDK5RAP3-210ENST00000578733 TPGS2Q68CL5 300 aa12□□□□□ -0.49
CDK5RAP3-210ENST00000578733 SLC8B1Q6J4K2 584 aa12□□□□□ -0.49
CDK5RAP3-210ENST00000578733 OSTM1Q86WC4 334 aa12□□□□□ -0.49
CDK5RAP3-210ENST00000578733 SPATA2LQ8IUW3 424 aaPredicted RBP12□□□□□ -0.49
CDK5RAP3-210ENST00000578733 CNGA4Q8IV77 575 aa12□□□□□ -0.49
CDK5RAP3-210ENST00000578733 UBR7Q8N806 425 aa12□□□□□ -0.49
CDK5RAP3-210ENST00000578733 RBBP8NLQ8NC74 664 aaPredicted RBP12□□□□□ -0.49
CDK5RAP3-210ENST00000578733 B3GALNT2Q8NCR0 500 aa12□□□□□ -0.49
CDK5RAP3-210ENST00000578733 SPPL2BQ8TCT7 592 aa12□□□□□ -0.49
CDK5RAP3-210ENST00000578733 KREMEN1Q96MU8 473 aa12□□□□□ -0.49
CDK5RAP3-210ENST00000578733 CDCA3Q99618 268 aaPredicted RBP12□□□□□ -0.49
CDK5RAP3-210ENST00000578733 ARID3AQ99856 593 aa12□□□□□ -0.49
CDK5RAP3-210ENST00000578733 NAA15Q9BXJ9 866 aaKnown RBP12□□□□□ -0.49
CDK5RAP3-210ENST00000578733 ZCWPW1Q9H0M4 648 aa12□□□□□ -0.49
CDK5RAP3-210ENST00000578733 SDCBP2Q9H190 292 aa12□□□□□ -0.49
CDK5RAP3-210ENST00000578733 PRDM12Q9H4Q4 367 aa12□□□□□ -0.49
CDK5RAP3-210ENST00000578733 NSUN3Q9H649 340 aaKnown RBP12□□□□□ -0.49
CDK5RAP3-210ENST00000578733 LUC7L2Q9Y383 392 aaKnown RBP12□□□□□ -0.49
CDK5RAP3-210ENST00000578733 NCOR1O75376 2440 aa12□□□□□ -0.49
CDK5RAP3-210ENST00000578733 GREB1Q4ZG55 1949 aa11.99□□□□□ -0.49
CDK5RAP3-210ENST00000578733 CHD9Q3L8U1 2897 aa11.99□□□□□ -0.49
CDK5RAP3-210ENST00000578733 C2orf71A6NGG8 1288 aa11.99□□□□□ -0.49
CDK5RAP3-210ENST00000578733 F8VZ95 297 aa11.99□□□□□ -0.49
CDK5RAP3-210ENST00000578733 LILRB3O75022 631 aa11.99□□□□□ -0.49
CDK5RAP3-210ENST00000578733 NOL4O94818 638 aa11.99□□□□□ -0.49
CDK5RAP3-210ENST00000578733 CSPG5O95196 566 aa11.99□□□□□ -0.49
CDK5RAP3-210ENST00000578733 GLUD1P00367 558 aa11.99□□□□□ -0.49
CDK5RAP3-210ENST00000578733 VDRP11473 427 aa11.99□□□□□ -0.49
CDK5RAP3-210ENST00000578733 CD19P15391 556 aa11.99□□□□□ -0.49
CDK5RAP3-210ENST00000578733 PTPN1P18031 435 aaKnown RBP11.99□□□□□ -0.49
CDK5RAP3-210ENST00000578733 ACO1P21399 889 aaKnown RBP11.99□□□□□ -0.49
CDK5RAP3-210ENST00000578733 ACAT1P24752 427 aaKnown RBP11.99□□□□□ -0.49
CDK5RAP3-210ENST00000578733 DNAJB1P25685 340 aa11.99□□□□□ -0.49
CDK5RAP3-210ENST00000578733 GNA15P30679 374 aa11.99□□□□□ -0.49
CDK5RAP3-210ENST00000578733 OR1D2P34982 312 aa11.99□□□□□ -0.49
CDK5RAP3-210ENST00000578733 SOX5P35711 763 aa11.99□□□□□ -0.49
CDK5RAP3-210ENST00000578733 PDE6CP51160 858 aa11.99□□□□□ -0.49
CDK5RAP3-210ENST00000578733 JAM2P57087 298 aa11.99□□□□□ -0.49
CDK5RAP3-210ENST00000578733 APBA1Q02410 837 aa11.99□□□□□ -0.49
CDK5RAP3-210ENST00000578733 GPR17Q13304 367 aa11.99□□□□□ -0.49
CDK5RAP3-210ENST00000578733 SLC39A12Q504Y0 691 aa11.99□□□□□ -0.49
CDK5RAP3-210ENST00000578733 SGO2Q562F6 1265 aa11.99□□□□□ -0.49
CDK5RAP3-210ENST00000578733 SFMBT2Q5VUG0 894 aa11.99□□□□□ -0.49
CDK5RAP3-210ENST00000578733 ACOT1Q86TX2 421 aa11.99□□□□□ -0.49
CDK5RAP3-210ENST00000578733 CRYBG2Q8N1P7 616 aa11.99□□□□□ -0.49
CDK5RAP3-210ENST00000578733 MYCBPAPQ8TBZ2 947 aa11.99□□□□□ -0.49
CDK5RAP3-210ENST00000578733 AUTS2Q8WXX7 1259 aa11.99□□□□□ -0.49
CDK5RAP3-210ENST00000578733 PPM1EQ8WY54 764 aa11.99□□□□□ -0.49
CDK5RAP3-210ENST00000578733 KAT5Q92993 513 aa11.99□□□□□ -0.49
CDK5RAP3-210ENST00000578733 FUBP3Q96I24 572 aaKnown RBP eCLIP11.99□□□□□ -0.49
CDK5RAP3-210ENST00000578733 HEXIM2Q96MH2 286 aaKnown RBP11.99□□□□□ -0.49
CDK5RAP3-210ENST00000578733 KLHL5Q96PQ7 755 aa11.99□□□□□ -0.49
CDK5RAP3-210ENST00000578733 MED10Q9BTT4 135 aa11.99□□□□□ -0.49
CDK5RAP3-210ENST00000578733 PDCL3Q9H2J4 239 aa11.99□□□□□ -0.49
CDK5RAP3-210ENST00000578733 ZNHIT6Q9NWK9 470 aaKnown RBP11.99□□□□□ -0.49
CDK5RAP3-210ENST00000578733 IMPACTQ9P2X3 320 aa11.99□□□□□ -0.49
CDK5RAP3-210ENST00000578733 HESX1Q9UBX0 185 aa11.99□□□□□ -0.49
CDK5RAP3-210ENST00000578733 CAPN11Q9UMQ6 739 aa11.99□□□□□ -0.49
CDK5RAP3-210ENST00000578733 CNTN6Q9UQ52 1028 aa11.99□□□□□ -0.49
CDK5RAP3-210ENST00000578733 PCDHB5Q9Y5E4 795 aa11.99□□□□□ -0.49
CDK5RAP3-210ENST00000578733 BDP1A6H8Y1 2624 aa11.98□□□□□ -0.49
CDK5RAP3-210ENST00000578733 EPOPA6NHQ4 379 aa11.98□□□□□ -0.49
CDK5RAP3-210ENST00000578733 SPDYE4A6NLX3 237 aa11.98□□□□□ -0.49
CDK5RAP3-210ENST00000578733 HIDE1A8MVS5 230 aa11.98□□□□□ -0.49
CDK5RAP3-210ENST00000578733 FOXN3O00409 490 aaPredicted RBP11.98□□□□□ -0.49
CDK5RAP3-210ENST00000578733 TEX28O15482 410 aa11.98□□□□□ -0.49
CDK5RAP3-210ENST00000578733 TBC1D4O60343 1298 aa11.98□□□□□ -0.49
CDK5RAP3-210ENST00000578733 CNPP09543 421 aaKnown RBP11.98□□□□□ -0.49
CDK5RAP3-210ENST00000578733 RPL17P18621 184 aaKnown RBP11.98□□□□□ -0.49
CDK5RAP3-210ENST00000578733 LMO2P25791 158 aa11.98□□□□□ -0.49
CDK5RAP3-210ENST00000578733 CASP14P31944 242 aa11.98□□□□□ -0.49
CDK5RAP3-210ENST00000578733 RAD23BP54727 409 aa11.98□□□□□ -0.49
CDK5RAP3-210ENST00000578733 PSMC1P62191 440 aaKnown RBP11.98□□□□□ -0.49
CDK5RAP3-210ENST00000578733 ROR1Q01973 937 aa11.98□□□□□ -0.49
CDK5RAP3-210ENST00000578733 CYP27A1Q02318 531 aa11.98□□□□□ -0.49
CDK5RAP3-210ENST00000578733 PLD1Q13393 1074 aa11.98□□□□□ -0.49
CDK5RAP3-210ENST00000578733 RAB33AQ14088 237 aa11.98□□□□□ -0.49
CDK5RAP3-210ENST00000578733 ASIC2Q16515 512 aa11.98□□□□□ -0.49
CDK5RAP3-210ENST00000578733 PTPN21Q16825 1174 aa11.98□□□□□ -0.49
CDK5RAP3-210ENST00000578733 AAK1Q2M2I8 961 aa11.98□□□□□ -0.49
CDK5RAP3-210ENST00000578733 MDH1BQ5I0G3 518 aa11.98□□□□□ -0.49
CDK5RAP3-210ENST00000578733 LIN9Q5TKA1 542 aa11.98□□□□□ -0.49
CDK5RAP3-210ENST00000578733 CCDC149Q6ZUS6 474 aa11.98□□□□□ -0.49
CDK5RAP3-210ENST00000578733 ZNF677Q86XU0 584 aa11.98□□□□□ -0.49
CDK5RAP3-210ENST00000578733 GLYCTKQ8IVS8 523 aa11.98□□□□□ -0.49
CDK5RAP3-210ENST00000578733 FAM71AQ8IYT1 594 aa11.98□□□□□ -0.49
CDK5RAP3-210ENST00000578733 SLC4A11Q8NBS3 891 aa11.98□□□□□ -0.49
CDK5RAP3-210ENST00000578733 OR10T2Q8NGX3 314 aa11.98□□□□□ -0.49
CDK5RAP3-210ENST00000578733 ZNF461Q8TAF7 563 aa11.98□□□□□ -0.49
CDK5RAP3-210ENST00000578733 CPLX3Q8WVH0 158 aa11.98□□□□□ -0.49
CDK5RAP3-210ENST00000578733 CYFIP2Q96F07 1278 aa11.98□□□□□ -0.49
CDK5RAP3-210ENST00000578733 CLSTN3Q9BQT9 956 aa11.98□□□□□ -0.49
CDK5RAP3-210ENST00000578733 TTYH3Q9C0H2 523 aa11.98□□□□□ -0.49
CDK5RAP3-210ENST00000578733 ELOVL4Q9GZR5 314 aa11.98□□□□□ -0.49
CDK5RAP3-210ENST00000578733 TLE6Q9H808 572 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms