RNA–Protein interactions for RNA: ENST00000578105.1

SKA2-203, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-203ENST00000578105 LSP1P33241 339 aa8.72□□□□□ -1.01
SKA2-203ENST00000578105 PCK1P35558 622 aa8.72□□□□□ -1.01
SKA2-203ENST00000578105 GJA5P36382 358 aa8.72□□□□□ -1.01
SKA2-203ENST00000578105 SCNN1AP37088 669 aa8.72□□□□□ -1.01
SKA2-203ENST00000578105 CLCN3P51790 818 aa8.72□□□□□ -1.01
SKA2-203ENST00000578105 PTPN11Q06124 597 aaPredicted RBP8.72□□□□□ -1.01
SKA2-203ENST00000578105 NR1H3Q13133 447 aa8.72□□□□□ -1.01
SKA2-203ENST00000578105 TMEM132DQ14C87 1099 aa8.72□□□□□ -1.01
SKA2-203ENST00000578105 TRADDQ15628 312 aa8.72□□□□□ -1.01
SKA2-203ENST00000578105 CCL15Q16663 113 aa8.72□□□□□ -1.01
SKA2-203ENST00000578105 PKDCCQ504Y2 493 aa8.72□□□□□ -1.01
SKA2-203ENST00000578105 TFDP3Q5H9I0 405 aa8.72□□□□□ -1.01
SKA2-203ENST00000578105 PLEKHH3Q7Z736 793 aa8.72□□□□□ -1.01
SKA2-203ENST00000578105 YTHDF3Q7Z739 585 aaKnown RBP8.72□□□□□ -1.01
SKA2-203ENST00000578105 DPP9Q86TI2 863 aa8.72□□□□□ -1.01
SKA2-203ENST00000578105 UNC93AQ86WB7 457 aa8.72□□□□□ -1.01
SKA2-203ENST00000578105 TRIM50Q86XT4 487 aa8.72□□□□□ -1.01
SKA2-203ENST00000578105 ZDHHC17Q8IUH5 632 aa8.72□□□□□ -1.01
SKA2-203ENST00000578105 CCDC50Q8IVM0 306 aa8.72□□□□□ -1.01
SKA2-203ENST00000578105 LRRC52Q8N7C0 313 aa8.72□□□□□ -1.01
SKA2-203ENST00000578105 C2orf69Q8N8R5 385 aa8.72□□□□□ -1.01
SKA2-203ENST00000578105 BCAS4Q8TDM0 211 aa8.72□□□□□ -1.01
SKA2-203ENST00000578105 P3H4Q92791 437 aa8.72□□□□□ -1.01
SKA2-203ENST00000578105 NKD2Q969F2 451 aaPredicted RBP8.72□□□□□ -1.01
SKA2-203ENST00000578105 MCRS1Q96EZ8 462 aa8.72□□□□□ -1.01
SKA2-203ENST00000578105 TMEM176AQ96HP8 235 aa8.72□□□□□ -1.01
SKA2-203ENST00000578105 BTBD6Q96KE9 485 aa8.72□□□□□ -1.01
SKA2-203ENST00000578105 HINFPQ9BQA5 517 aa8.72□□□□□ -1.01
SKA2-203ENST00000578105 TINF2Q9BSI4 451 aa8.72□□□□□ -1.01
SKA2-203ENST00000578105 C16orf70Q9BSU1 422 aa8.72□□□□□ -1.01
SKA2-203ENST00000578105 GCOM2Q9BZD3 368 aaPredicted RBP8.72□□□□□ -1.01
SKA2-203ENST00000578105 RNPEPQ9H4A4 650 aa8.72□□□□□ -1.01
SKA2-203ENST00000578105 PDZD7Q9H5P4 517 aa8.72□□□□□ -1.01
SKA2-203ENST00000578105 TUT1Q9H6E5 874 aaKnown RBP8.72□□□□□ -1.01
SKA2-203ENST00000578105 EFCC1Q9HA90 598 aa8.72□□□□□ -1.01
SKA2-203ENST00000578105 PRDM16Q9HAZ2 1276 aa8.72□□□□□ -1.01
SKA2-203ENST00000578105 ASNSD1Q9NWL6 643 aa8.72□□□□□ -1.01
SKA2-203ENST00000578105 ASIC3Q9UHC3 531 aa8.72□□□□□ -1.01
SKA2-203ENST00000578105 SLC12A6Q9UHW9 1150 aa8.72□□□□□ -1.01
SKA2-203ENST00000578105 BARX2Q9UMQ3 279 aaPredicted RBP8.72□□□□□ -1.01
SKA2-203ENST00000578105 AKT3Q9Y243 479 aa8.72□□□□□ -1.01
SKA2-203ENST00000578105 ACTL7BQ9Y614 415 aa8.72□□□□□ -1.01
SKA2-203ENST00000578105 NRCAMQ92823 1304 aa8.72□□□□□ -1.01
SKA2-203ENST00000578105 A0A087WZ62 844 aa8.71□□□□□ -1.02
SKA2-203ENST00000578105 LACTBL1A8MY62 500 aa8.71□□□□□ -1.02
SKA2-203ENST00000578105 BTBD19C9JJ37 291 aa8.71□□□□□ -1.02
SKA2-203ENST00000578105 GPR25O00155 361 aa8.71□□□□□ -1.02
SKA2-203ENST00000578105 RGS16O15492 202 aaPredicted RBP8.71□□□□□ -1.02
SKA2-203ENST00000578105 RNF8O76064 485 aa8.71□□□□□ -1.02
SKA2-203ENST00000578105 FAM107AO95990 144 aa8.71□□□□□ -1.02
SKA2-203ENST00000578105 ITGAVP06756 1048 aa8.71□□□□□ -1.02
SKA2-203ENST00000578105 MMP3P08254 477 aa8.71□□□□□ -1.02
SKA2-203ENST00000578105 CXCL8P10145 99 aa8.71□□□□□ -1.02
SKA2-203ENST00000578105 RALAP11233 206 aa8.71□□□□□ -1.02
SKA2-203ENST00000578105 KRT3P12035 628 aa8.71□□□□□ -1.02
SKA2-203ENST00000578105 TSHRP16473 764 aa8.71□□□□□ -1.02
SKA2-203ENST00000578105 BRD2P25440 801 aaKnown RBP8.71□□□□□ -1.02
SKA2-203ENST00000578105 IVDP26440 423 aa8.71□□□□□ -1.02
SKA2-203ENST00000578105 PNPLA4P41247 253 aa8.71□□□□□ -1.02
SKA2-203ENST00000578105 YARSP54577 528 aaKnown RBP8.71□□□□□ -1.02
SKA2-203ENST00000578105 RAD23BP54727 409 aa8.71□□□□□ -1.02
SKA2-203ENST00000578105 CBLBQ13191 982 aa8.71□□□□□ -1.02
SKA2-203ENST00000578105 STAT4Q14765 748 aa8.71□□□□□ -1.02
SKA2-203ENST00000578105 MORF4L2Q15014 288 aa8.71□□□□□ -1.02
SKA2-203ENST00000578105 RASA2Q15283 850 aa8.71□□□□□ -1.02
SKA2-203ENST00000578105 GRIK4Q16099 956 aa8.71□□□□□ -1.02
SKA2-203ENST00000578105 TAZQ16635 292 aa8.71□□□□□ -1.02
SKA2-203ENST00000578105 PTGISQ16647 500 aa8.71□□□□□ -1.02
SKA2-203ENST00000578105 WDR72Q3MJ13 1102 aa8.71□□□□□ -1.02
SKA2-203ENST00000578105 TNFAIP8L3Q5GJ75 292 aa8.71□□□□□ -1.02
SKA2-203ENST00000578105 EEF1DP3Q658K8 133 aa8.71□□□□□ -1.02
SKA2-203ENST00000578105 ARCQ7LC44 396 aa8.71□□□□□ -1.02
SKA2-203ENST00000578105 GPR142Q7Z601 462 aa8.71□□□□□ -1.02
SKA2-203ENST00000578105 ADAT2Q7Z6V5 191 aaKnown RBP8.71□□□□□ -1.02
SKA2-203ENST00000578105 ZDHHC14Q8IZN3 488 aa8.71□□□□□ -1.02
SKA2-203ENST00000578105 NME8Q8N427 588 aa8.71□□□□□ -1.02
SKA2-203ENST00000578105 ZNF454Q8N9F8 522 aa8.71□□□□□ -1.02
SKA2-203ENST00000578105 C1orf127Q8N9H9 656 aa8.71□□□□□ -1.02
SKA2-203ENST00000578105 STK32AQ8WU08 396 aa8.71□□□□□ -1.02
SKA2-203ENST00000578105 USP6NLQ92738 828 aa8.71□□□□□ -1.02
SKA2-203ENST00000578105 MAML3Q96JK9 1138 aa8.71□□□□□ -1.02
SKA2-203ENST00000578105 SLITRK1Q96PX8 696 aa8.71□□□□□ -1.02
SKA2-203ENST00000578105 FDXACB1Q9BRP7 624 aaPredicted RBP8.71□□□□□ -1.02
SKA2-203ENST00000578105 KATNAL1Q9BW62 490 aa8.71□□□□□ -1.02
SKA2-203ENST00000578105 TRIM31Q9BZY9 425 aa8.71□□□□□ -1.02
SKA2-203ENST00000578105 CCDC134Q9H6E4 229 aa8.71□□□□□ -1.02
SKA2-203ENST00000578105 GBA2Q9HCG7 927 aaPredicted RBP8.71□□□□□ -1.02
SKA2-203ENST00000578105 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.71□□□□□ -1.027e-8■■■■■ 186.3
SKA2-203ENST00000578105 PDGFCQ9NRA1 345 aa8.71□□□□□ -1.02
SKA2-203ENST00000578105 SIX4Q9UIU6 781 aa8.71□□□□□ -1.02
SKA2-203ENST00000578105 ANAPC5Q9UJX4 755 aa8.71□□□□□ -1.02
SKA2-203ENST00000578105 ZHX1Q9UKY1 873 aaPredicted RBP8.71□□□□□ -1.02
SKA2-203ENST00000578105 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.71□□□□□ -1.02
SKA2-203ENST00000578105 NEU2Q9Y3R4 380 aa8.71□□□□□ -1.02
SKA2-203ENST00000578105 hCG_1818297A0A087WSY0 165 aa8.7□□□□□ -1.02
SKA2-203ENST00000578105 MBLAC1A4D2B0 266 aaPredicted RBP8.7□□□□□ -1.02
SKA2-203ENST00000578105 A6NJR5 290 aa8.7□□□□□ -1.02
SKA2-203ENST00000578105 NDUFAB1O14561 156 aa8.7□□□□□ -1.02
SKA2-203ENST00000578105 RASGRF2O14827 1237 aa8.7□□□□□ -1.02
SKA2-203ENST00000578105 LIASO43766 372 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms