RNA–Protein interactions for RNA: ENST00000577827.5

PTPRM-205, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 2

Gene PTPRM, Length 4,640 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-205ENST00000577827 CDYLQ9Y232 598 aa10.82□□□□□ -0.68
PTPRM-205ENST00000577827 RAD17O75943 681 aa10.82□□□□□ -0.68
PTPRM-205ENST00000577827 ZCCHC18P0CG32 403 aa10.82□□□□□ -0.68
PTPRM-205ENST00000577827 SERPINB10P48595 397 aa10.82□□□□□ -0.68
PTPRM-205ENST00000577827 GCNT1Q02742 428 aa10.82□□□□□ -0.68
PTPRM-205ENST00000577827 EPC2Q52LR7 807 aa10.82□□□□□ -0.68
PTPRM-205ENST00000577827 SAMD3Q8N6K7 520 aa10.82□□□□□ -0.68
PTPRM-205ENST00000577827 DNAJC19Q96DA6 116 aa10.82□□□□□ -0.68
PTPRM-205ENST00000577827 GMCL1Q96IK5 515 aa10.82□□□□□ -0.68
PTPRM-205ENST00000577827 LRRC19Q9H756 370 aa10.82□□□□□ -0.68
PTPRM-205ENST00000577827 RIC1Q4ADV7 1423 aa10.82□□□□□ -0.68
PTPRM-205ENST00000577827 SKAP2O75563 359 aaPredicted RBP10.82□□□□□ -0.68
PTPRM-205ENST00000577827 PRKCBP05771 671 aa10.82□□□□□ -0.68
PTPRM-205ENST00000577827 GPD1P21695 349 aa10.82□□□□□ -0.68
PTPRM-205ENST00000577827 EPHB2P29323 1055 aa10.82□□□□□ -0.68
PTPRM-205ENST00000577827 SSTR3P32745 418 aaPredicted RBP10.82□□□□□ -0.68
PTPRM-205ENST00000577827 SLC12A3P55017 1021 aa10.82□□□□□ -0.68
PTPRM-205ENST00000577827 ABCE1P61221 599 aaKnown RBP10.82□□□□□ -0.68
PTPRM-205ENST00000577827 POU5F1BQ06416 359 aa10.82□□□□□ -0.68
PTPRM-205ENST00000577827 SLC47A2Q86VL8 602 aa10.82□□□□□ -0.68
PTPRM-205ENST00000577827 SLC5A5Q92911 643 aa10.82□□□□□ -0.68
PTPRM-205ENST00000577827 TRAPPC9Q96Q05 1148 aa10.82□□□□□ -0.68
PTPRM-205ENST00000577827 ZNF184Q99676 751 aaPredicted RBP10.82□□□□□ -0.68
PTPRM-205ENST00000577827 NUDT12Q9BQG2 462 aa10.82□□□□□ -0.68
PTPRM-205ENST00000577827 PI4K2AQ9BTU6 479 aa10.82□□□□□ -0.68
PTPRM-205ENST00000577827 TTYH3Q9C0H2 523 aa10.82□□□□□ -0.68
PTPRM-205ENST00000577827 BLOC1S6Q9UL45 172 aa10.82□□□□□ -0.68
PTPRM-205ENST00000577827 ADGRA3Q8IWK6 1321 aa10.82□□□□□ -0.68
PTPRM-205ENST00000577827 INTS5Q6P9B9 1019 aaKnown RBP10.81□□□□□ -0.68
PTPRM-205ENST00000577827 RYBPQ8N488 228 aaPredicted RBP10.81□□□□□ -0.68
PTPRM-205ENST00000577827 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.81□□□□□ -0.68
PTPRM-205ENST00000577827 ZNF75CPQ92670 426 aaPredicted RBP10.81□□□□□ -0.68
PTPRM-205ENST00000577827 ART4Q93070 314 aa10.81□□□□□ -0.68
PTPRM-205ENST00000577827 CLMNQ96JQ2 1002 aa10.81□□□□□ -0.68
PTPRM-205ENST00000577827 CTNNAL1Q9UBT7 734 aa10.81□□□□□ -0.68
PTPRM-205ENST00000577827 LOC100653049A0A140TA62 436 aa10.81□□□□□ -0.68
PTPRM-205ENST00000577827 HUS1O60921 280 aa10.81□□□□□ -0.68
PTPRM-205ENST00000577827 E2F6O75461 281 aa10.81□□□□□ -0.68
PTPRM-205ENST00000577827 KRT34O76011 436 aa10.81□□□□□ -0.68
PTPRM-205ENST00000577827 IL18RAPO95256 599 aa10.81□□□□□ -0.68
PTPRM-205ENST00000577827 CLPTM1O96005 669 aa10.81□□□□□ -0.68
PTPRM-205ENST00000577827 FGRP09769 529 aa10.81□□□□□ -0.68
PTPRM-205ENST00000577827 FDFT1P37268 417 aa10.81□□□□□ -0.68
PTPRM-205ENST00000577827 STX5Q13190 355 aa10.81□□□□□ -0.68
PTPRM-205ENST00000577827 EMC2Q15006 297 aa10.81□□□□□ -0.68
PTPRM-205ENST00000577827 KBTBD12Q3ZCT8 623 aa10.81□□□□□ -0.68
PTPRM-205ENST00000577827 OLFML2BQ68BL8 750 aa10.81□□□□□ -0.68
PTPRM-205ENST00000577827 KCNK18Q7Z418 384 aa10.81□□□□□ -0.68
PTPRM-205ENST00000577827 C4orf32Q8N8J7 132 aa10.81□□□□□ -0.68
PTPRM-205ENST00000577827 MAP3K20Q9NYL2 800 aaKnown RBP10.81□□□□□ -0.68
PTPRM-205ENST00000577827 SOX13Q9UN79 622 aa10.81□□□□□ -0.68
PTPRM-205ENST00000577827 FRMPD4Q14CM0 1322 aa10.81□□□□□ -0.68
PTPRM-205ENST00000577827 BAZ2BQ9UIF8 2168 aaKnown RBP10.81□□□□□ -0.68
PTPRM-205ENST00000577827 FCHO1O14526 889 aa10.81□□□□□ -0.68
PTPRM-205ENST00000577827 SHBGP04278 402 aa10.81□□□□□ -0.68
PTPRM-205ENST00000577827 AQP5P55064 265 aa10.81□□□□□ -0.68
PTPRM-205ENST00000577827 OTUD4Q01804 1114 aaKnown RBP10.81□□□□□ -0.68
PTPRM-205ENST00000577827 R3HDM1Q15032 1099 aaKnown RBP10.81□□□□□ -0.68
PTPRM-205ENST00000577827 MROH9Q5TGP6 573 aa10.81□□□□□ -0.68
PTPRM-205ENST00000577827 TMCO4Q5TGY1 634 aa10.81□□□□□ -0.68
PTPRM-205ENST00000577827 IRF2BP2Q7Z5L9 587 aa10.81□□□□□ -0.68
PTPRM-205ENST00000577827 ILKAPQ9H0C8 392 aaPredicted RBP10.81□□□□□ -0.68
PTPRM-205ENST00000577827 AFF2P51816 1311 aa10.81□□□□□ -0.68
PTPRM-205ENST00000577827 ANGPT2O15123 496 aa10.81□□□□□ -0.68
PTPRM-205ENST00000577827 MTSS1O43312 755 aa10.81□□□□□ -0.68
PTPRM-205ENST00000577827 DEAF1O75398 565 aaPredicted RBP10.81□□□□□ -0.68
PTPRM-205ENST00000577827 KLRK1P26718 216 aa10.81□□□□□ -0.68
PTPRM-205ENST00000577827 MAP4P27816 1152 aaKnown RBP10.81□□□□□ -0.68
PTPRM-205ENST00000577827 PPARGP37231 505 aaPredicted RBP10.81□□□□□ -0.68
PTPRM-205ENST00000577827 CDK16Q00536 496 aa10.81□□□□□ -0.68
PTPRM-205ENST00000577827 PDK1Q15118 436 aa10.81□□□□□ -0.68
PTPRM-205ENST00000577827 MFSD5Q6N075 450 aa10.81□□□□□ -0.68
PTPRM-205ENST00000577827 RNF139Q8WU17 664 aa10.81□□□□□ -0.68
PTPRM-205ENST00000577827 OPTNQ96CV9 577 aa10.81□□□□□ -0.68
PTPRM-205ENST00000577827 APOPT1Q96IL0 206 aa10.81□□□□□ -0.68
PTPRM-205ENST00000577827 PPP1R2P1Q96PQ5 205 aa10.81□□□□□ -0.68
PTPRM-205ENST00000577827 CPSF3Q9UKF6 684 aaKnown RBP10.81□□□□□ -0.68
PTPRM-205ENST00000577827 SORCS3Q9UPU3 1222 aa10.81□□□□□ -0.68
PTPRM-205ENST00000577827 ZNF263O14978 683 aa10.8□□□□□ -0.68
PTPRM-205ENST00000577827 KCNJ2P63252 427 aa10.8□□□□□ -0.68
PTPRM-205ENST00000577827 RBP5P82980 135 aa10.8□□□□□ -0.68
PTPRM-205ENST00000577827 ROR2Q01974 943 aaKnown RBP10.8□□□□□ -0.68
PTPRM-205ENST00000577827 ITPK1Q13572 414 aa10.8□□□□□ -0.68
PTPRM-205ENST00000577827 PDK2Q15119 407 aa10.8□□□□□ -0.68
PTPRM-205ENST00000577827 GSTA3Q16772 222 aa10.8□□□□□ -0.68
PTPRM-205ENST00000577827 CATSPER4Q7RTX7 472 aa10.8□□□□□ -0.68
PTPRM-205ENST00000577827 DNAAF5Q86Y56 855 aa10.8□□□□□ -0.68
PTPRM-205ENST00000577827 PRELID2Q8N945 189 aa10.8□□□□□ -0.68
PTPRM-205ENST00000577827 TAS1R2Q8TE23 839 aa10.8□□□□□ -0.68
PTPRM-205ENST00000577827 TMA16Q96EY4 203 aaKnown RBP10.8□□□□□ -0.68
PTPRM-205ENST00000577827 OXNAD1Q96HP4 312 aaPredicted RBP10.8□□□□□ -0.68
PTPRM-205ENST00000577827 TMEM109Q9BVC6 243 aa10.8□□□□□ -0.68
PTPRM-205ENST00000577827 TRIM62Q9BVG3 475 aa10.8□□□□□ -0.68
PTPRM-205ENST00000577827 SEPT3Q9UH03 358 aa10.8□□□□□ -0.68
PTPRM-205ENST00000577827 ZBTB12Q9Y330 459 aaPredicted RBP10.8□□□□□ -0.68
PTPRM-205ENST00000577827 AP4S1Q9Y587 144 aa10.8□□□□□ -0.68
PTPRM-205ENST00000577827 TRPC5OSA6NMA1 111 aa10.8□□□□□ -0.68
PTPRM-205ENST00000577827 MAN1A2O60476 641 aa10.8□□□□□ -0.68
PTPRM-205ENST00000577827 ATP6V1C1P21283 382 aa10.8□□□□□ -0.68
PTPRM-205ENST00000577827 PEX5P50542 639 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms