RNA–Protein interactions for RNA: ENST00000577578.5

CSNK1D-206, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 928 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-206ENST00000577578 PCDHB5Q9Y5E4 795 aa13.36□□□□□ -0.27
CSNK1D-206ENST00000577578 NCANO14594 1321 aa13.36□□□□□ -0.27
CSNK1D-206ENST00000577578 CFAP54Q96N23 3096 aa13.36□□□□□ -0.27
CSNK1D-206ENST00000577578 ANAPC1Q9H1A4 1944 aa13.35□□□□□ -0.27
CSNK1D-206ENST00000577578 ZNF638Q14966 1978 aaKnown RBP13.35□□□□□ -0.27
CSNK1D-206ENST00000577578 KANSL1LA0AUZ9 987 aa13.35□□□□□ -0.27
CSNK1D-206ENST00000577578 ARNTLO00327 626 aa13.35□□□□□ -0.27
CSNK1D-206ENST00000577578 PDXKO00764 312 aa13.35□□□□□ -0.27
CSNK1D-206ENST00000577578 RHOBTB3O94955 611 aa13.35□□□□□ -0.27
CSNK1D-206ENST00000577578 CST3P01034 146 aaPredicted RBP13.35□□□□□ -0.27
CSNK1D-206ENST00000577578 RPN1P04843 607 aaKnown RBP13.35□□□□□ -0.27
CSNK1D-206ENST00000577578 FAM163BP0C2L3 166 aa13.35□□□□□ -0.27
CSNK1D-206ENST00000577578 DLATP10515 647 aaKnown RBP13.35□□□□□ -0.27
CSNK1D-206ENST00000577578 HMGA1P17096 107 aaKnown RBP13.35□□□□□ -0.27
CSNK1D-206ENST00000577578 TNNI1P19237 187 aa13.35□□□□□ -0.27
CSNK1D-206ENST00000577578 GABRR2P28476 465 aa13.35□□□□□ -0.27
CSNK1D-206ENST00000577578 PCSK1P29120 753 aa13.35□□□□□ -0.27
CSNK1D-206ENST00000577578 VIPR2P41587 438 aa13.35□□□□□ -0.27
CSNK1D-206ENST00000577578 FCHO2Q0JRZ9 810 aa13.35□□□□□ -0.27
CSNK1D-206ENST00000577578 DPYDQ12882 1025 aa13.35□□□□□ -0.27
CSNK1D-206ENST00000577578 BECN1Q14457 450 aa13.35□□□□□ -0.27
CSNK1D-206ENST00000577578 STXBP5Q5T5C0 1151 aa13.35□□□□□ -0.27
CSNK1D-206ENST00000577578 FAM171BQ6P995 826 aa13.35□□□□□ -0.27
CSNK1D-206ENST00000577578 KRBA2Q6ZNG9 492 aa13.35□□□□□ -0.27
CSNK1D-206ENST00000577578 TMEM150AQ86TG1 271 aa13.35□□□□□ -0.27
CSNK1D-206ENST00000577578 ALYREFQ86V81 257 aaKnown RBP13.35□□□□□ -0.27
CSNK1D-206ENST00000577578 MFSD6LQ8IWD5 586 aa13.35□□□□□ -0.27
CSNK1D-206ENST00000577578 RDH13Q8NBN7 331 aa13.35□□□□□ -0.27
CSNK1D-206ENST00000577578 ZNF516Q92618 1163 aa13.35□□□□□ -0.27
CSNK1D-206ENST00000577578 CCDC127Q96BQ5 260 aa13.35□□□□□ -0.27
CSNK1D-206ENST00000577578 RSPRY1Q96DX4 576 aa13.35□□□□□ -0.27
CSNK1D-206ENST00000577578 FUBP3Q96I24 572 aaKnown RBP eCLIP13.35□□□□□ -0.27
CSNK1D-206ENST00000577578 FNBP1Q96RU3 617 aa13.35□□□□□ -0.27
CSNK1D-206ENST00000577578 TRMT61BQ9BVS5 477 aaKnown RBP13.35□□□□□ -0.27
CSNK1D-206ENST00000577578 FOXQ1Q9C009 403 aa13.35□□□□□ -0.27
CSNK1D-206ENST00000577578 ZMYM5Q9UJ78 669 aa13.35□□□□□ -0.27
CSNK1D-206ENST00000577578 R3HCC1Q9Y3T6 440 aaKnown RBP13.35□□□□□ -0.27
CSNK1D-206ENST00000577578 GVINP1Q7Z2Y8 2422 aa13.35□□□□□ -0.27
CSNK1D-206ENST00000577578 PTPRZ1P23471 2315 aaPredicted RBP13.35□□□□□ -0.27
CSNK1D-206ENST00000577578 ZNF292O60281 2723 aa13.34□□□□□ -0.27
CSNK1D-206ENST00000577578 EXOC3O60645 756 aa13.34□□□□□ -0.27
CSNK1D-206ENST00000577578 TACC1O75410 805 aa13.34□□□□□ -0.27
CSNK1D-206ENST00000577578 GLULP15104 373 aa13.34□□□□□ -0.27
CSNK1D-206ENST00000577578 WARSP23381 471 aaKnown RBP13.34□□□□□ -0.27
CSNK1D-206ENST00000577578 ACAT1P24752 427 aaKnown RBP13.34□□□□□ -0.27
CSNK1D-206ENST00000577578 CDC25CP30307 473 aa13.34□□□□□ -0.27
CSNK1D-206ENST00000577578 NBL1P41271 181 aa13.34□□□□□ -0.27
CSNK1D-206ENST00000577578 MLLT6P55198 1093 aaPredicted RBP13.34□□□□□ -0.27
CSNK1D-206ENST00000577578 GRM2Q14416 872 aa13.34□□□□□ -0.27
CSNK1D-206ENST00000577578 ARID3BQ8IVW6 561 aaPredicted RBP13.34□□□□□ -0.27
CSNK1D-206ENST00000577578 PLEKHO2Q8TD55 490 aa13.34□□□□□ -0.27
CSNK1D-206ENST00000577578 PARD3BQ8TEW8 1205 aa13.34□□□□□ -0.27
CSNK1D-206ENST00000577578 ATOH1Q92858 354 aaPredicted RBP13.34□□□□□ -0.27
CSNK1D-206ENST00000577578 IRF7Q92985 503 aa13.34□□□□□ -0.27
CSNK1D-206ENST00000577578 TRMT2BQ96GJ1 504 aaKnown RBP13.34□□□□□ -0.27
CSNK1D-206ENST00000577578 MYRFLQ96LU7 910 aa13.34□□□□□ -0.27
CSNK1D-206ENST00000577578 NELL2Q99435 816 aa13.34□□□□□ -0.27
CSNK1D-206ENST00000577578 XYLT2Q9H1B5 865 aa13.34□□□□□ -0.27
CSNK1D-206ENST00000577578 ATXN3LQ9H3M9 355 aa13.34□□□□□ -0.27
CSNK1D-206ENST00000577578 GOLPH3LQ9H4A5 285 aa13.34□□□□□ -0.27
CSNK1D-206ENST00000577578 TASP1Q9H6P5 420 aa13.34□□□□□ -0.27
CSNK1D-206ENST00000577578 BRD9Q9H8M2 597 aa13.34□□□□□ -0.27
CSNK1D-206ENST00000577578 VRTNQ9H8Y1 702 aa13.34□□□□□ -0.27
CSNK1D-206ENST00000577578 OBP2AQ9NY56 170 aa13.34□□□□□ -0.27
CSNK1D-206ENST00000577578 GTF3C4Q9UKN8 822 aa13.34□□□□□ -0.27
CSNK1D-206ENST00000577578 TRAF3IP3Q9Y228 551 aa13.34□□□□□ -0.27
CSNK1D-206ENST00000577578 MYBPHLA2RUH7 354 aa13.33□□□□□ -0.28
CSNK1D-206ENST00000577578 SOBPA7XYQ1 873 aa13.33□□□□□ -0.28
CSNK1D-206ENST00000577578 HEPACAM2A8MVW5 462 aa13.33□□□□□ -0.28
CSNK1D-206ENST00000577578 TULP1O00294 542 aaPredicted RBP13.33□□□□□ -0.28
CSNK1D-206ENST00000577578 STK25O00506 426 aa13.33□□□□□ -0.28
CSNK1D-206ENST00000577578 HCRTO43612 131 aa13.33□□□□□ -0.28
CSNK1D-206ENST00000577578 NOL4O94818 638 aa13.33□□□□□ -0.28
CSNK1D-206ENST00000577578 DCNP07585 359 aaKnown RBP13.33□□□□□ -0.28
CSNK1D-206ENST00000577578 PRR29P0C7W0 189 aa13.33□□□□□ -0.28
CSNK1D-206ENST00000577578 RFX1P22670 979 aa13.33□□□□□ -0.28
CSNK1D-206ENST00000577578 CYP2F1P24903 491 aa13.33□□□□□ -0.28
CSNK1D-206ENST00000577578 LMO2P25791 158 aa13.33□□□□□ -0.28
CSNK1D-206ENST00000577578 ATICP31939 592 aa13.33□□□□□ -0.28
CSNK1D-206ENST00000577578 MAGEA11P43364 429 aa13.33□□□□□ -0.28
CSNK1D-206ENST00000577578 CDR1P51861 262 aa13.33□□□□□ -0.28
CSNK1D-206ENST00000577578 AP3M2P53677 418 aa13.33□□□□□ -0.28
CSNK1D-206ENST00000577578 NLRP12P59046 1061 aa13.33□□□□□ -0.28
CSNK1D-206ENST00000577578 KCNB1Q14721 858 aa13.33□□□□□ -0.28
CSNK1D-206ENST00000577578 ANGPT1Q15389 498 aa13.33□□□□□ -0.28
CSNK1D-206ENST00000577578 NFIL3Q16649 462 aa13.33□□□□□ -0.28
CSNK1D-206ENST00000577578 CCDC142Q17RM4 750 aa13.33□□□□□ -0.28
CSNK1D-206ENST00000577578 ZNF687Q8N1G0 1237 aa13.33□□□□□ -0.28
CSNK1D-206ENST00000577578 FSIP1Q8NA03 581 aa13.33□□□□□ -0.28
CSNK1D-206ENST00000577578 FAM200AQ8TCP9 573 aa13.33□□□□□ -0.28
CSNK1D-206ENST00000577578 GIPC2Q8TF65 315 aa13.33□□□□□ -0.28
CSNK1D-206ENST00000577578 CLDN23Q96B33 292 aa13.33□□□□□ -0.28
CSNK1D-206ENST00000577578 CEP295NLQ96MC4 621 aa13.33□□□□□ -0.28
CSNK1D-206ENST00000577578 PI4K2AQ9BTU6 479 aa13.33□□□□□ -0.28
CSNK1D-206ENST00000577578 SLITRK6Q9H5Y7 841 aa13.33□□□□□ -0.28
CSNK1D-206ENST00000577578 LTB4R2Q9NPC1 389 aa13.33□□□□□ -0.28
CSNK1D-206ENST00000577578 HEBP1Q9NRV9 189 aa13.33□□□□□ -0.28
CSNK1D-206ENST00000577578 FAM86C1Q9NVL1 165 aa13.33□□□□□ -0.28
CSNK1D-206ENST00000577578 CDH9Q9ULB4 789 aa13.33□□□□□ -0.28
CSNK1D-206ENST00000577578 NME7Q9Y5B8 376 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms