RNA–Protein interactions for RNA: ENST00000576708.5

NUP88-212, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-212ENST00000576708 MEGF10Q96KG7 1140 aa6.86□□□□□ -1.31
NUP88-212ENST00000576708 MYADMQ96S97 322 aa6.86□□□□□ -1.31
NUP88-212ENST00000576708 POLR3CQ9BUI4 534 aaPredicted RBP6.86□□□□□ -1.31
NUP88-212ENST00000576708 TMPRSS13Q9BYE2 586 aa6.86□□□□□ -1.31
NUP88-212ENST00000576708 NFKBIZQ9BYH8 718 aa6.86□□□□□ -1.31
NUP88-212ENST00000576708 FZD8Q9H461 694 aa6.86□□□□□ -1.31
NUP88-212ENST00000576708 PDZD7Q9H5P4 517 aa6.86□□□□□ -1.31
NUP88-212ENST00000576708 KCNK12Q9HB15 430 aa6.86□□□□□ -1.31
NUP88-212ENST00000576708 RXFP1Q9HBX9 757 aa6.86□□□□□ -1.31
NUP88-212ENST00000576708 TUFT1Q9NNX1 390 aa6.86□□□□□ -1.31
NUP88-212ENST00000576708 CHST7Q9NS84 486 aa6.86□□□□□ -1.31
NUP88-212ENST00000576708 RAD18Q9NS91 495 aa6.86□□□□□ -1.31
NUP88-212ENST00000576708 PRMT7Q9NVM4 692 aaPredicted RBP6.86□□□□□ -1.31
NUP88-212ENST00000576708 GGT7Q9UJ14 662 aa6.86□□□□□ -1.31
NUP88-212ENST00000576708 LIMCH1Q9UPQ0 1083 aa6.86□□□□□ -1.31
NUP88-212ENST00000576708 PCDHB5Q9Y5E4 795 aa6.86□□□□□ -1.31
NUP88-212ENST00000576708 C2orf16Q68DN1 1984 aa6.86□□□□□ -1.31
NUP88-212ENST00000576708 DENND4AQ7Z401 1863 aa6.85□□□□□ -1.31
NUP88-212ENST00000576708 ARHGEF35A5YM69 484 aa6.85□□□□□ -1.31
NUP88-212ENST00000576708 PP2D1A8MPX8 630 aa6.85□□□□□ -1.31
NUP88-212ENST00000576708 ADAM12O43184 909 aa6.85□□□□□ -1.31
NUP88-212ENST00000576708 TGM5O43548 720 aa6.85□□□□□ -1.31
NUP88-212ENST00000576708 EIF4EBP3O60516 100 aaPredicted RBP6.85□□□□□ -1.31
NUP88-212ENST00000576708 RECQL4O94761 1208 aa6.85□□□□□ -1.31
NUP88-212ENST00000576708 GLUD1P00367 558 aa6.85□□□□□ -1.31
NUP88-212ENST00000576708 PRKCBP05771 671 aa6.85□□□□□ -1.31
NUP88-212ENST00000576708 CYP11B2P19099 503 aa6.85□□□□□ -1.31
NUP88-212ENST00000576708 RPA1P27694 616 aa6.85□□□□□ -1.31
NUP88-212ENST00000576708 CCT6AP40227 531 aaKnown RBP6.85□□□□□ -1.31
NUP88-212ENST00000576708 GATA4P43694 442 aa6.85□□□□□ -1.31
NUP88-212ENST00000576708 NTHL1P78549 312 aa6.85□□□□□ -1.31
NUP88-212ENST00000576708 GRIK3Q13003 919 aa6.85□□□□□ -1.31
NUP88-212ENST00000576708 PRPF4BQ13523 1007 aaKnown RBP6.85□□□□□ -1.31
NUP88-212ENST00000576708 TDGQ13569 410 aa6.85□□□□□ -1.31
NUP88-212ENST00000576708 HSP90AA2PQ14568 343 aaPredicted RBP6.85□□□□□ -1.31
NUP88-212ENST00000576708 PCBP1Q15365 356 aaKnown RBP eCLIP6.85□□□□□ -1.31
NUP88-212ENST00000576708 SAFBQ15424 915 aaKnown RBP eCLIP6.85□□□□□ -1.31
NUP88-212ENST00000576708 NAB2Q15742 525 aa6.85□□□□□ -1.31
NUP88-212ENST00000576708 USP41Q3LFD5 358 aa6.85□□□□□ -1.31
NUP88-212ENST00000576708 GLRA4Q5JXX5 417 aa6.85□□□□□ -1.31
NUP88-212ENST00000576708 TTC38Q5R3I4 469 aa6.85□□□□□ -1.31
NUP88-212ENST00000576708 NT5DC1Q5TFE4 455 aa6.85□□□□□ -1.31
NUP88-212ENST00000576708 FAM171A1Q5VUB5 890 aa6.85□□□□□ -1.31
NUP88-212ENST00000576708 CDCA2Q69YH5 1023 aaPredicted RBP6.85□□□□□ -1.31
NUP88-212ENST00000576708 CWF19L1Q69YN2 538 aaKnown RBP6.85□□□□□ -1.31
NUP88-212ENST00000576708 LILRA6Q6PI73 481 aa6.85□□□□□ -1.31
NUP88-212ENST00000576708 OTOP3Q7RTS5 596 aa6.85□□□□□ -1.31
NUP88-212ENST00000576708 CEP57Q86XR8 500 aa6.85□□□□□ -1.31
NUP88-212ENST00000576708 ZBTB8OSQ8IWT0 167 aa6.85□□□□□ -1.31
NUP88-212ENST00000576708 HACE1Q8IYU2 909 aa6.85□□□□□ -1.31
NUP88-212ENST00000576708 C12orf50Q8NA57 414 aaPredicted RBP6.85□□□□□ -1.31
NUP88-212ENST00000576708 MCPH1Q8NEM0 835 aa6.85□□□□□ -1.31
NUP88-212ENST00000576708 CMASQ8NFW8 434 aaPredicted RBP6.85□□□□□ -1.31
NUP88-212ENST00000576708 DEPTORQ8TB45 409 aa6.85□□□□□ -1.31
NUP88-212ENST00000576708 GPBAR1Q8TDU6 330 aa6.85□□□□□ -1.31
NUP88-212ENST00000576708 SMG7Q92540 1137 aaKnown RBP6.85□□□□□ -1.31
NUP88-212ENST00000576708 KIF2CQ99661 725 aa6.85□□□□□ -1.31
NUP88-212ENST00000576708 CCDC113Q9H0I3 377 aa6.85□□□□□ -1.31
NUP88-212ENST00000576708 NT5C3AQ9H0P0 336 aa6.85□□□□□ -1.31
NUP88-212ENST00000576708 MFSD1Q9H3U5 465 aa6.85□□□□□ -1.31
NUP88-212ENST00000576708 WDR6Q9NNW5 1121 aaKnown RBP6.85□□□□□ -1.31
NUP88-212ENST00000576708 ADAM28Q9UKQ2 775 aa6.85□□□□□ -1.31
NUP88-212ENST00000576708 SSX2IPQ9Y2D8 614 aa6.85□□□□□ -1.31
NUP88-212ENST00000576708 GDAQ9Y2T3 454 aa6.85□□□□□ -1.31
NUP88-212ENST00000576708 MYO10Q9HD67 2058 aa6.85□□□□□ -1.31
NUP88-212ENST00000576708 CLUHO75153 1309 aa6.84□□□□□ -1.31
NUP88-212ENST00000576708 E9PMD0 336 aa6.84□□□□□ -1.31
NUP88-212ENST00000576708 I3L4J1 428 aa6.84□□□□□ -1.31
NUP88-212ENST00000576708 ACKR2O00590 384 aa6.84□□□□□ -1.31
NUP88-212ENST00000576708 N4BP3O15049 544 aa6.84□□□□□ -1.31
NUP88-212ENST00000576708 TFE3P19532 575 aaPredicted RBP6.84□□□□□ -1.31
NUP88-212ENST00000576708 CDC25AP30304 524 aa6.84□□□□□ -1.31
NUP88-212ENST00000576708 TOB1P50616 345 aaPredicted RBP6.84□□□□□ -1.31
NUP88-212ENST00000576708 FANCCQ00597 558 aa6.84□□□□□ -1.31
NUP88-212ENST00000576708 TUSC3Q13454 348 aa6.84□□□□□ -1.31
NUP88-212ENST00000576708 SEPT6Q14141 434 aa6.84□□□□□ -1.31
NUP88-212ENST00000576708 IL17AQ16552 155 aa6.84□□□□□ -1.31
NUP88-212ENST00000576708 MAPK6Q16659 721 aa6.84□□□□□ -1.31
NUP88-212ENST00000576708 FAM187BQ17R55 369 aa6.84□□□□□ -1.31
NUP88-212ENST00000576708 FDX2Q6P4F2 183 aa6.84□□□□□ -1.31
NUP88-212ENST00000576708 CD300LGQ6UXG3 332 aa6.84□□□□□ -1.31
NUP88-212ENST00000576708 RSPO2Q6UXX9 243 aaPredicted RBP6.84□□□□□ -1.31
NUP88-212ENST00000576708 C15orf39Q6ZRI6 1047 aa6.84□□□□□ -1.31
NUP88-212ENST00000576708 GET4Q7L5D6 327 aaPredicted RBP6.84□□□□□ -1.31
NUP88-212ENST00000576708 HS2ST1Q7LGA3 356 aa6.84□□□□□ -1.31
NUP88-212ENST00000576708 ASCL5Q7RTU5 278 aa6.84□□□□□ -1.31
NUP88-212ENST00000576708 RELL1Q8IUW5 271 aa6.84□□□□□ -1.31
NUP88-212ENST00000576708 SLC44A3Q8N4M1 653 aa6.84□□□□□ -1.31
NUP88-212ENST00000576708 FBXO18Q8NFZ0 1043 aa6.84□□□□□ -1.31
NUP88-212ENST00000576708 ERMNQ8TAM6 284 aa6.84□□□□□ -1.31
NUP88-212ENST00000576708 LNX1Q8TBB1 728 aaPredicted RBP6.84□□□□□ -1.31
NUP88-212ENST00000576708 UBL7Q96S82 380 aaPredicted RBP6.84□□□□□ -1.31
NUP88-212ENST00000576708 PRRX2Q99811 253 aa6.84□□□□□ -1.31
NUP88-212ENST00000576708 CLSTN3Q9BQT9 956 aa6.84□□□□□ -1.31
NUP88-212ENST00000576708 LLPHQ9BRT6 129 aaKnown RBP6.84□□□□□ -1.31
NUP88-212ENST00000576708 RPP25Q9BUL9 199 aaKnown RBP6.84□□□□□ -1.31
NUP88-212ENST00000576708 KRTAP4-8Q9BYQ9 185 aa6.84□□□□□ -1.31
NUP88-212ENST00000576708 BHMT2Q9H2M3 363 aa6.84□□□□□ -1.31
NUP88-212ENST00000576708 FOXP1Q9H334 677 aaPredicted RBP6.84□□□□□ -1.31
NUP88-212ENST00000576708 PIDD1Q9HB75 910 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms