RNA–Protein interactions for RNA: ENST00000576218.5

SMG6-220, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 902 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-220ENST00000576218 GCLMP48507 274 aa16.31■□□□□ 0.2
SMG6-220ENST00000576218 FKBP3Q00688 224 aaKnown RBP16.31■□□□□ 0.2
SMG6-220ENST00000576218 LRRC63Q05C16 580 aa16.31■□□□□ 0.2
SMG6-220ENST00000576218 CAMK4Q16566 473 aa16.31■□□□□ 0.2
SMG6-220ENST00000576218 SGSM1Q2NKQ1 1148 aa16.31■□□□□ 0.2
SMG6-220ENST00000576218 ZCWPW2Q504Y3 356 aa16.31■□□□□ 0.2
SMG6-220ENST00000576218 PRSS36Q5K4E3 855 aa16.31■□□□□ 0.2
SMG6-220ENST00000576218 PARM1Q6UWI2 310 aa16.31■□□□□ 0.2
SMG6-220ENST00000576218 DNAJB7Q7Z6W7 309 aaPredicted RBP16.31■□□□□ 0.2
SMG6-220ENST00000576218 SLC44A3Q8N4M1 653 aa16.31■□□□□ 0.2
SMG6-220ENST00000576218 GPR152Q8TDT2 470 aa16.31■□□□□ 0.2
SMG6-220ENST00000576218 KBTBD7Q8WVZ9 684 aa16.31■□□□□ 0.2
SMG6-220ENST00000576218 FGF14Q92915 247 aa16.31■□□□□ 0.2
SMG6-220ENST00000576218 MRPL45Q9BRJ2 306 aaKnown RBP16.31■□□□□ 0.2
SMG6-220ENST00000576218 GZF1Q9H116 711 aaPredicted RBP16.31■□□□□ 0.2
SMG6-220ENST00000576218 DNAJC25Q9H1X3 360 aa16.31■□□□□ 0.2
SMG6-220ENST00000576218 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.31■□□□□ 0.2
SMG6-220ENST00000576218 TMLHEQ9NVH6 421 aa16.31■□□□□ 0.2
SMG6-220ENST00000576218 MAGEC2Q9UBF1 373 aaPredicted RBP16.31■□□□□ 0.2
SMG6-220ENST00000576218 MAGED2Q9UNF1 606 aaPredicted RBP16.31■□□□□ 0.2
SMG6-220ENST00000576218 ANHXE9PGG2 379 aa16.3■□□□□ 0.2
SMG6-220ENST00000576218 GABRDO14764 452 aa16.3■□□□□ 0.2
SMG6-220ENST00000576218 SLC16A3O15427 465 aaKnown RBP16.3■□□□□ 0.2
SMG6-220ENST00000576218 NARSO43776 548 aaKnown RBP16.3■□□□□ 0.2
SMG6-220ENST00000576218 TACC1O75410 805 aa16.3■□□□□ 0.2
SMG6-220ENST00000576218 MICAL2O94851 1124 aa16.3■□□□□ 0.2
SMG6-220ENST00000576218 STAU1O95793 577 aaKnown RBP16.3■□□□□ 0.2
SMG6-220ENST00000576218 HLA-DRAP01903 254 aa16.3■□□□□ 0.2
SMG6-220ENST00000576218 C4BPAP04003 597 aaKnown RBP16.3■□□□□ 0.2
SMG6-220ENST00000576218 SRFP11831 508 aa16.3■□□□□ 0.2
SMG6-220ENST00000576218 CYP2F1P24903 491 aa16.3■□□□□ 0.2
SMG6-220ENST00000576218 LMO2P25791 158 aa16.3■□□□□ 0.2
SMG6-220ENST00000576218 GABRR2P28476 465 aa16.3■□□□□ 0.2
SMG6-220ENST00000576218 CLDN10P78369 228 aa16.3■□□□□ 0.2
SMG6-220ENST00000576218 TEAD2Q15562 447 aa16.3■□□□□ 0.2
SMG6-220ENST00000576218 ZACNQ401N2 412 aa16.3■□□□□ 0.2
SMG6-220ENST00000576218 COBLL1Q53SF7 1204 aa16.3■□□□□ 0.2
SMG6-220ENST00000576218 MDH1BQ5I0G3 518 aa16.3■□□□□ 0.2
SMG6-220ENST00000576218 SV2AQ7L0J3 742 aa16.3■□□□□ 0.2
SMG6-220ENST00000576218 ADSSL1Q8N142 457 aa16.3■□□□□ 0.2
SMG6-220ENST00000576218 SPATA20Q8TB22 786 aa16.3■□□□□ 0.2
SMG6-220ENST00000576218 TAF4BQ92750 862 aa16.3■□□□□ 0.2
SMG6-220ENST00000576218 MYLPFQ96A32 169 aa16.3■□□□□ 0.2
SMG6-220ENST00000576218 DHTKD1Q96HY7 919 aaPredicted RBP16.3■□□□□ 0.2
SMG6-220ENST00000576218 MKNK1Q9BUB5 465 aa16.3■□□□□ 0.2
SMG6-220ENST00000576218 DNAI2Q9GZS0 605 aa16.3■□□□□ 0.2
SMG6-220ENST00000576218 SMYD3Q9H7B4 428 aa16.3■□□□□ 0.2
SMG6-220ENST00000576218 ZFP14Q9HCL3 533 aa16.3■□□□□ 0.2
SMG6-220ENST00000576218 ABCB6Q9NP58 842 aa16.3■□□□□ 0.2
SMG6-220ENST00000576218 CTNND2Q9UQB3 1225 aa16.3■□□□□ 0.2
SMG6-220ENST00000576218 BICDL2A1A5D9 508 aa16.29■□□□□ 0.2
SMG6-220ENST00000576218 MYBPHLA2RUH7 354 aa16.29■□□□□ 0.2
SMG6-220ENST00000576218 TRIM49BA6NDI0 452 aa16.29■□□□□ 0.2
SMG6-220ENST00000576218 DPYSL4O14531 572 aa16.29■□□□□ 0.2
SMG6-220ENST00000576218 ATP2C2O75185 946 aa16.29■□□□□ 0.2
SMG6-220ENST00000576218 CSH1P0DML2 217 aa16.29■□□□□ 0.2
SMG6-220ENST00000576218 CSH2P0DML3 217 aa16.29■□□□□ 0.2
SMG6-220ENST00000576218 ATF6P18850 670 aa16.29■□□□□ 0.2
SMG6-220ENST00000576218 CCNE1P24864 410 aa16.29■□□□□ 0.2
SMG6-220ENST00000576218 CDC25CP30307 473 aa16.29■□□□□ 0.2
SMG6-220ENST00000576218 GRIK1P39086 918 aa16.29■□□□□ 0.2
SMG6-220ENST00000576218 CCR2P41597 374 aa16.29■□□□□ 0.2
SMG6-220ENST00000576218 RAP1GAPP47736 663 aa16.29■□□□□ 0.2
SMG6-220ENST00000576218 MXI1P50539 228 aa16.29■□□□□ 0.2
SMG6-220ENST00000576218 DDR2Q16832 855 aa16.29■□□□□ 0.2
SMG6-220ENST00000576218 CCDC40Q4G0X9 1142 aa16.29■□□□□ 0.2
SMG6-220ENST00000576218 ANKRD40Q6AI12 368 aa16.29■□□□□ 0.2
SMG6-220ENST00000576218 SIX5Q8N196 739 aa16.29■□□□□ 0.2
SMG6-220ENST00000576218 FBXL6Q8N531 539 aa16.29■□□□□ 0.2
SMG6-220ENST00000576218 FLCNQ8NFG4 579 aa16.29■□□□□ 0.2
SMG6-220ENST00000576218 FUBP3Q96I24 572 aaKnown RBP eCLIP16.29■□□□□ 0.2
SMG6-220ENST00000576218 GBP4Q96PP9 640 aa16.29■□□□□ 0.2
SMG6-220ENST00000576218 MED10Q9BTT4 135 aa16.29■□□□□ 0.2
SMG6-220ENST00000576218 GPR88Q9GZN0 384 aa16.29■□□□□ 0.2
SMG6-220ENST00000576218 XYLT2Q9H1B5 865 aa16.29■□□□□ 0.2
SMG6-220ENST00000576218 TMEM8AQ9HCN3 771 aa16.29■□□□□ 0.2
SMG6-220ENST00000576218 MYO10Q9HD67 2058 aa16.29■□□□□ 0.2
SMG6-220ENST00000576218 DOCK6Q96HP0 2047 aa16.29■□□□□ 0.2
SMG6-220ENST00000576218 DOCK8Q8NF50 2099 aa16.28■□□□□ 0.2
SMG6-220ENST00000576218 ATP8B3O60423 1300 aa16.28■□□□□ 0.2
SMG6-220ENST00000576218 GOLGA6L22H0YM25 854 aa16.28■□□□□ 0.2
SMG6-220ENST00000576218 VNN1O95497 513 aa16.28■□□□□ 0.2
SMG6-220ENST00000576218 FAM163BP0C2L3 166 aa16.28■□□□□ 0.2
SMG6-220ENST00000576218 GPR15P49685 360 aa16.28■□□□□ 0.2
SMG6-220ENST00000576218 EPHA5P54756 1037 aa16.28■□□□□ 0.2
SMG6-220ENST00000576218 CCDC142Q17RM4 750 aa16.28■□□□□ 0.2
SMG6-220ENST00000576218 CFAP221Q4G0U5 840 aa16.28■□□□□ 0.2
SMG6-220ENST00000576218 GPR158Q5T848 1215 aa16.28■□□□□ 0.2
SMG6-220ENST00000576218 SDHAF4Q5VUM1 108 aa16.28■□□□□ 0.2
SMG6-220ENST00000576218 KRT39Q6A163 491 aa16.28■□□□□ 0.2
SMG6-220ENST00000576218 TMC8Q8IU68 726 aa16.28■□□□□ 0.2
SMG6-220ENST00000576218 YAF2Q8IY57 180 aa16.28■□□□□ 0.2
SMG6-220ENST00000576218 SHKBP1Q8TBC3 707 aa16.28■□□□□ 0.2
SMG6-220ENST00000576218 ZSCAN18Q8TBC5 510 aaPredicted RBP16.28■□□□□ 0.2
SMG6-220ENST00000576218 NELFBQ8WX92 580 aa16.28■□□□□ 0.2
SMG6-220ENST00000576218 ELMO3Q96BJ8 720 aa16.28■□□□□ 0.2
SMG6-220ENST00000576218 ASIC4Q96FT7 647 aa16.28■□□□□ 0.2
SMG6-220ENST00000576218 TNIP3Q96KP6 325 aa16.28■□□□□ 0.2
SMG6-220ENST00000576218 VRTNQ9H8Y1 702 aa16.28■□□□□ 0.2
SMG6-220ENST00000576218 ZNF334Q9HCZ1 680 aaPredicted RBP16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms