RNA–Protein interactions for RNA: ENST00000575431.1

CCDC40-214, Transcript of coiled-coil domain containing 40, humanhuman

TSL 3

Gene CCDC40, Length 551 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-214ENST00000575431 SLC39A12Q504Y0 691 aa10.2□□□□□ -0.78
CCDC40-214ENST00000575431 IQCEQ6IPM2 695 aa10.2□□□□□ -0.78
CCDC40-214ENST00000575431 SPOPLQ6IQ16 392 aa10.2□□□□□ -0.78
CCDC40-214ENST00000575431 VSTM1Q6UX27 236 aa10.2□□□□□ -0.78
CCDC40-214ENST00000575431 TMC5Q6UXY8 1006 aa10.2□□□□□ -0.78
CCDC40-214ENST00000575431 ENOSF1Q7L5Y1 443 aa10.2□□□□□ -0.78
CCDC40-214ENST00000575431 ITIH5Q86UX2 942 aa10.2□□□□□ -0.78
CCDC40-214ENST00000575431 LRRTM3Q86VH5 581 aa10.2□□□□□ -0.78
CCDC40-214ENST00000575431 SPATA2LQ8IUW3 424 aaPredicted RBP10.2□□□□□ -0.78
CCDC40-214ENST00000575431 C12orf76Q8N812 135 aaPredicted RBP10.2□□□□□ -0.78
CCDC40-214ENST00000575431 ATAD1Q8NBU5 361 aa10.2□□□□□ -0.78
CCDC40-214ENST00000575431 LMO3Q8TAP4 145 aa10.2□□□□□ -0.78
CCDC40-214ENST00000575431 SMG7Q92540 1137 aaKnown RBP10.2□□□□□ -0.78
CCDC40-214ENST00000575431 ZNF512Q96ME7 567 aaPredicted RBP10.2□□□□□ -0.78
CCDC40-214ENST00000575431 PGLYRP2Q96PD5 576 aa10.2□□□□□ -0.78
CCDC40-214ENST00000575431 PKMYT1Q99640 499 aa10.2□□□□□ -0.78
CCDC40-214ENST00000575431 NT5C1AQ9BXI3 368 aa10.2□□□□□ -0.78
CCDC40-214ENST00000575431 SMYD3Q9H7B4 428 aa10.2□□□□□ -0.78
CCDC40-214ENST00000575431 APOBEC3GQ9HC16 384 aaKnown RBP10.2□□□□□ -0.78
CCDC40-214ENST00000575431 FANCLQ9NW38 375 aa10.2□□□□□ -0.78
CCDC40-214ENST00000575431 GTF3C4Q9UKN8 822 aa10.2□□□□□ -0.78
CCDC40-214ENST00000575431 USP15Q9Y4E8 981 aaPredicted RBP10.2□□□□□ -0.78
CCDC40-214ENST00000575431 MYBPHLA2RUH7 354 aa10.19□□□□□ -0.78
CCDC40-214ENST00000575431 LRRC10BA6NIK2 292 aa10.19□□□□□ -0.78
CCDC40-214ENST00000575431 CILPO75339 1184 aa10.19□□□□□ -0.78
CCDC40-214ENST00000575431 RFPL2O75678 378 aa10.19□□□□□ -0.78
CCDC40-214ENST00000575431 WEE2P0C1S8 567 aa10.19□□□□□ -0.78
CCDC40-214ENST00000575431 PTPN2P17706 415 aa10.19□□□□□ -0.78
CCDC40-214ENST00000575431 CDH8P55286 799 aa10.19□□□□□ -0.78
CCDC40-214ENST00000575431 VEPH1Q14D04 833 aa10.19□□□□□ -0.78
CCDC40-214ENST00000575431 NCAPHQ15003 741 aa10.19□□□□□ -0.78
CCDC40-214ENST00000575431 CLUL1Q15846 466 aa10.19□□□□□ -0.78
CCDC40-214ENST00000575431 EXOC3L4Q17RC7 722 aa10.19□□□□□ -0.78
CCDC40-214ENST00000575431 MGAT5BQ3V5L5 792 aa10.19□□□□□ -0.78
CCDC40-214ENST00000575431 FKBP15Q5T1M5 1219 aa10.19□□□□□ -0.78
CCDC40-214ENST00000575431 SCARA5Q6ZMJ2 495 aa10.19□□□□□ -0.78
CCDC40-214ENST00000575431 B3GALNT2Q8NCR0 500 aa10.19□□□□□ -0.78
CCDC40-214ENST00000575431 TATDN2Q93075 761 aa10.19□□□□□ -0.78
CCDC40-214ENST00000575431 ZNF707Q96C28 371 aaPredicted RBP10.19□□□□□ -0.78
CCDC40-214ENST00000575431 TMEM209Q96SK2 561 aa10.19□□□□□ -0.78
CCDC40-214ENST00000575431 PHF7Q9BWX1 381 aaPredicted RBP10.19□□□□□ -0.78
CCDC40-214ENST00000575431 ELOVL4Q9GZR5 314 aa10.19□□□□□ -0.78
CCDC40-214ENST00000575431 SDCBP2Q9H190 292 aa10.19□□□□□ -0.78
CCDC40-214ENST00000575431 WDR6Q9NNW5 1121 aaKnown RBP10.19□□□□□ -0.78
CCDC40-214ENST00000575431 AVENQ9NQS1 362 aaPredicted RBP10.19□□□□□ -0.78
CCDC40-214ENST00000575431 ABI2Q9NYB9 513 aaPredicted RBP10.19□□□□□ -0.78
CCDC40-214ENST00000575431 EHD2Q9NZN4 543 aa10.19□□□□□ -0.78
CCDC40-214ENST00000575431 LIMA1Q9UHB6 759 aaKnown RBP10.19□□□□□ -0.78
CCDC40-214ENST00000575431 KIAA1257Q9ULG3 409 aa10.19□□□□□ -0.78
CCDC40-214ENST00000575431 USTQ9Y2C2 406 aa10.19□□□□□ -0.78
CCDC40-214ENST00000575431 NR2E1Q9Y466 385 aa10.19□□□□□ -0.78
CCDC40-214ENST00000575431 YIPF1Q9Y548 306 aa10.19□□□□□ -0.78
CCDC40-214ENST00000575431 ZFP37Q9Y6Q3 630 aaPredicted RBP10.19□□□□□ -0.78
CCDC40-214ENST00000575431 ZNF197O14709 1029 aa10.18□□□□□ -0.78
CCDC40-214ENST00000575431 TRIM66O15016 1216 aa10.18□□□□□ -0.78
CCDC40-214ENST00000575431 ATP2C2O75185 946 aa10.18□□□□□ -0.78
CCDC40-214ENST00000575431 LRRN2O75325 713 aa10.18□□□□□ -0.78
CCDC40-214ENST00000575431 MICAL2O94851 1124 aa10.18□□□□□ -0.78
CCDC40-214ENST00000575431 VNN2O95498 520 aa10.18□□□□□ -0.78
CCDC40-214ENST00000575431 FGF19O95750 216 aa10.18□□□□□ -0.78
CCDC40-214ENST00000575431 IL9P15248 144 aa10.18□□□□□ -0.78
CCDC40-214ENST00000575431 ZNF18P17022 549 aa10.18□□□□□ -0.78
CCDC40-214ENST00000575431 CD58P19256 250 aa10.18□□□□□ -0.78
CCDC40-214ENST00000575431 RFX1P22670 979 aa10.18□□□□□ -0.78
CCDC40-214ENST00000575431 RAP1GAPP47736 663 aa10.18□□□□□ -0.78
CCDC40-214ENST00000575431 KCNQ1P51787 676 aa10.18□□□□□ -0.78
CCDC40-214ENST00000575431 NDST1P52848 882 aa10.18□□□□□ -0.78
CCDC40-214ENST00000575431 MFAP3P55082 362 aa10.18□□□□□ -0.78
CCDC40-214ENST00000575431 PSMC1P62191 440 aaKnown RBP10.18□□□□□ -0.78
CCDC40-214ENST00000575431 CYP27A1Q02318 531 aa10.18□□□□□ -0.78
CCDC40-214ENST00000575431 TWF1Q12792 350 aa10.18□□□□□ -0.78
CCDC40-214ENST00000575431 TAF12Q16514 161 aa10.18□□□□□ -0.78
CCDC40-214ENST00000575431 MIIPQ5JXC2 388 aa10.18□□□□□ -0.78
CCDC40-214ENST00000575431 CYP4A22Q5TCH4 519 aa10.18□□□□□ -0.78
CCDC40-214ENST00000575431 TRIM65Q6PJ69 517 aa10.18□□□□□ -0.78
CCDC40-214ENST00000575431 OTOP3Q7RTS5 596 aa10.18□□□□□ -0.78
CCDC40-214ENST00000575431 ADHFE1Q8IWW8 467 aa10.18□□□□□ -0.78
CCDC40-214ENST00000575431 PLCD3Q8N3E9 789 aa10.18□□□□□ -0.78
CCDC40-214ENST00000575431 PPM1KQ8N3J5 372 aa10.18□□□□□ -0.78
CCDC40-214ENST00000575431 AOPEPQ8N6M6 819 aa10.18□□□□□ -0.78
CCDC40-214ENST00000575431 ACSF2Q96CM8 615 aaPredicted RBP10.18□□□□□ -0.78
CCDC40-214ENST00000575431 PCED1BQ96HM7 432 aa10.18□□□□□ -0.78
CCDC40-214ENST00000575431 SEPT5Q99719 369 aaPredicted RBP10.18□□□□□ -0.78
CCDC40-214ENST00000575431 APOL5Q9BWW9 433 aa10.18□□□□□ -0.78
CCDC40-214ENST00000575431 INTS2Q9H0H0 1204 aaKnown RBP10.18□□□□□ -0.78
CCDC40-214ENST00000575431 CRTAC1Q9NQ79 661 aa10.18□□□□□ -0.78
CCDC40-214ENST00000575431 CISHQ9NSE2 258 aa10.18□□□□□ -0.78
CCDC40-214ENST00000575431 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.18□□□□□ -0.78
CCDC40-214ENST00000575431 GCNT4Q9P109 453 aa10.18□□□□□ -0.78
CCDC40-214ENST00000575431 SLC27A5Q9Y2P5 690 aa10.18□□□□□ -0.78
CCDC40-214ENST00000575431 DAAM1Q9Y4D1 1078 aa10.18□□□□□ -0.78
CCDC40-214ENST00000575431 CHD7Q9P2D1 2997 aa10.17□□□□□ -0.78
CCDC40-214ENST00000575431 CLUHO75153 1309 aa10.17□□□□□ -0.78
CCDC40-214ENST00000575431 GOLGA6L19H0YKK7 550 aa10.17□□□□□ -0.78
CCDC40-214ENST00000575431 PES1O00541 588 aaKnown RBP10.17□□□□□ -0.78
CCDC40-214ENST00000575431 CCL16O15467 120 aa10.17□□□□□ -0.78
CCDC40-214ENST00000575431 CSH1P0DML2 217 aa10.17□□□□□ -0.78
CCDC40-214ENST00000575431 CSH2P0DML3 217 aa10.17□□□□□ -0.78
CCDC40-214ENST00000575431 PON1P27169 355 aa10.17□□□□□ -0.78
CCDC40-214ENST00000575431 ANXA13P27216 316 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms