RNA–Protein interactions for RNA: ENST00000574428.5

ATPAF1-213, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 1 (best) BASIC

Gene ATPAF1, Length 1,760 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-213ENST00000574428 PPP1R26Q5T8A7 1209 aaPredicted RBP25.53■■□□□ 1.68
ATPAF1-213ENST00000574428 DENND1BQ6P3S1 775 aa25.53■■□□□ 1.68
ATPAF1-213ENST00000574428 CCAR2Q8N163 923 aaKnown RBP25.53■■□□□ 1.68
ATPAF1-213ENST00000574428 OR10T2Q8NGX3 314 aa25.53■■□□□ 1.68
ATPAF1-213ENST00000574428 SP7Q8TDD2 431 aaPredicted RBP25.53■■□□□ 1.68
ATPAF1-213ENST00000574428 CYFIP2Q96F07 1278 aa25.53■■□□□ 1.68
ATPAF1-213ENST00000574428 DNAI2Q9GZS0 605 aa25.53■■□□□ 1.68
ATPAF1-213ENST00000574428 CRTAC1Q9NQ79 661 aa25.53■■□□□ 1.68
ATPAF1-213ENST00000574428 PCDHGC3Q9UN70 934 aa25.53■■□□□ 1.68
ATPAF1-213ENST00000574428 MICAL2O94851 1124 aa25.52■■□□□ 1.68
ATPAF1-213ENST00000574428 MAGEA1P43355 309 aa25.52■■□□□ 1.68
ATPAF1-213ENST00000574428 MDH1BQ5I0G3 518 aa25.52■■□□□ 1.68
ATPAF1-213ENST00000574428 NAA35Q5VZE5 725 aa25.52■■□□□ 1.68
ATPAF1-213ENST00000574428 FAM109BQ6ICB4 259 aaPredicted RBP25.52■■□□□ 1.68
ATPAF1-213ENST00000574428 THEM5Q8N1Q8 247 aa25.52■■□□□ 1.68
ATPAF1-213ENST00000574428 PACSIN1Q9BY11 444 aa25.52■■□□□ 1.68
ATPAF1-213ENST00000574428 SPG21Q9NZD8 308 aa25.52■■□□□ 1.68
ATPAF1-213ENST00000574428 CDH9Q9ULB4 789 aa25.52■■□□□ 1.68
ATPAF1-213ENST00000574428 CEP290O15078 2479 aa25.52■■□□□ 1.68
ATPAF1-213ENST00000574428 LAMA2P24043 3122 aaKnown RBP25.52■■□□□ 1.68
ATPAF1-213ENST00000574428 GRXCR1A8MXD5 290 aa25.51■■□□□ 1.67
ATPAF1-213ENST00000574428 H0YGN5 161 aa25.51■■□□□ 1.67
ATPAF1-213ENST00000574428 EFEMP2O95967 443 aa25.51■■□□□ 1.67
ATPAF1-213ENST00000574428 CNGA2Q16280 664 aa25.51■■□□□ 1.67
ATPAF1-213ENST00000574428 GOLGA7BQ2TAP0 167 aa25.51■■□□□ 1.67
ATPAF1-213ENST00000574428 RTP2Q5QGT7 225 aa25.51■■□□□ 1.67
ATPAF1-213ENST00000574428 PDZRN4Q6ZMN7 1036 aaPredicted RBP25.51■■□□□ 1.67
ATPAF1-213ENST00000574428 TRIM72Q6ZMU5 477 aa25.51■■□□□ 1.67
ATPAF1-213ENST00000574428 KIAA1328Q86T90 577 aa25.51■■□□□ 1.67
ATPAF1-213ENST00000574428 CPA5Q8WXQ8 436 aa25.51■■□□□ 1.67
ATPAF1-213ENST00000574428 TMEM169Q96HH4 297 aa25.51■■□□□ 1.67
ATPAF1-213ENST00000574428 TMEM209Q96SK2 561 aa25.51■■□□□ 1.67
ATPAF1-213ENST00000574428 ACBD6Q9BR61 282 aa25.51■■□□□ 1.67
ATPAF1-213ENST00000574428 UBE2OQ9C0C9 1292 aaKnown RBP25.51■■□□□ 1.67
ATPAF1-213ENST00000574428 AAASQ9NRG9 546 aa25.51■■□□□ 1.67
ATPAF1-213ENST00000574428 TSPAN16Q9UKR8 245 aa25.51■■□□□ 1.67
ATPAF1-213ENST00000574428 MYBPHLA2RUH7 354 aa25.51■■□□□ 1.67
ATPAF1-213ENST00000574428 RCCD1A6NED2 376 aa25.51■■□□□ 1.67
ATPAF1-213ENST00000574428 M0QYV0 167 aa25.51■■□□□ 1.67
ATPAF1-213ENST00000574428 OAZ2O95190 189 aa25.51■■□□□ 1.67
ATPAF1-213ENST00000574428 CYP1A1P04798 512 aaPredicted RBP25.51■■□□□ 1.67
ATPAF1-213ENST00000574428 NOMO3P69849 1222 aa25.51■■□□□ 1.67
ATPAF1-213ENST00000574428 ZSCAN12O43309 604 aa25.5■■□□□ 1.67
ATPAF1-213ENST00000574428 UNGP13051 313 aaPredicted RBP25.5■■□□□ 1.67
ATPAF1-213ENST00000574428 ADORA2BP29275 332 aa25.5■■□□□ 1.67
ATPAF1-213ENST00000574428 VAV2P52735 878 aa25.5■■□□□ 1.67
ATPAF1-213ENST00000574428 ARHGAP17Q68EM7 881 aa25.5■■□□□ 1.67
ATPAF1-213ENST00000574428 LCLAT1Q6UWP7 414 aa25.5■■□□□ 1.67
ATPAF1-213ENST00000574428 C1orf131Q8NDD1 294 aaKnown RBP25.5■■□□□ 1.67
ATPAF1-213ENST00000574428 SLC2A14Q8TDB8 520 aa25.5■■□□□ 1.67
ATPAF1-213ENST00000574428 CLP1Q92989 425 aaKnown RBP25.5■■□□□ 1.67
ATPAF1-213ENST00000574428 PPP1R13BQ96KQ4 1090 aa25.5■■□□□ 1.67
ATPAF1-213ENST00000574428 TTPALQ9BTX7 342 aa25.5■■□□□ 1.67
ATPAF1-213ENST00000574428 GTF3C4Q9UKN8 822 aa25.5■■□□□ 1.67
ATPAF1-213ENST00000574428 PCDHB12Q9Y5F1 795 aa25.5■■□□□ 1.67
ATPAF1-213ENST00000574428 FTLP02792 175 aaPredicted RBP25.49■■□□□ 1.67
ATPAF1-213ENST00000574428 GZMAP12544 262 aa25.49■■□□□ 1.67
ATPAF1-213ENST00000574428 MYOGP15173 224 aa25.49■■□□□ 1.67
ATPAF1-213ENST00000574428 INTS6LQ5JSJ4 861 aaKnown RBP25.49■■□□□ 1.67
ATPAF1-213ENST00000574428 RNF168Q8IYW5 571 aaPredicted RBP25.49■■□□□ 1.67
ATPAF1-213ENST00000574428 UBA3Q8TBC4 463 aa25.49■■□□□ 1.67
ATPAF1-213ENST00000574428 GDF15Q99988 308 aa25.49■■□□□ 1.67
ATPAF1-213ENST00000574428 RTN2O75298 545 aa25.49■■□□□ 1.67
ATPAF1-213ENST00000574428 LSM8O95777 96 aaKnown RBP25.49■■□□□ 1.67
ATPAF1-213ENST00000574428 STILQ15468 1287 aa25.49■■□□□ 1.67
ATPAF1-213ENST00000574428 CTXN3Q4LDR2 81 aa25.49■■□□□ 1.67
ATPAF1-213ENST00000574428 C10orf76Q5T2E6 689 aa25.49■■□□□ 1.67
ATPAF1-213ENST00000574428 REXO1L1PQ8IX06 675 aa25.49■■□□□ 1.67
ATPAF1-213ENST00000574428 WDTC1Q8N5D0 677 aa25.49■■□□□ 1.67
ATPAF1-213ENST00000574428 TMEM35BQ8NCS4 154 aa25.49■■□□□ 1.67
ATPAF1-213ENST00000574428 LACRTQ9GZZ8 138 aa25.49■■□□□ 1.67
ATPAF1-213ENST00000574428 LUC7LQ9NQ29 371 aaKnown RBP25.49■■□□□ 1.67
ATPAF1-213ENST00000574428 CEP83Q9Y592 693 aa25.49■■□□□ 1.67
ATPAF1-213ENST00000574428 CARNS1A5YM72 827 aa25.48■■□□□ 1.67
ATPAF1-213ENST00000574428 CLDN5O00501 218 aa25.48■■□□□ 1.67
ATPAF1-213ENST00000574428 OR4Q2P0C623 313 aa25.48■■□□□ 1.67
ATPAF1-213ENST00000574428 PPM1AP35813 382 aa25.48■■□□□ 1.67
ATPAF1-213ENST00000574428 TSPY1Q01534 308 aa25.48■■□□□ 1.67
ATPAF1-213ENST00000574428 CENPCQ03188 943 aa25.48■■□□□ 1.67
ATPAF1-213ENST00000574428 MRPL58Q14197 206 aaKnown RBP25.48■■□□□ 1.67
ATPAF1-213ENST00000574428 USP41Q3LFD5 358 aa25.48■■□□□ 1.67
ATPAF1-213ENST00000574428 ACAD10Q6JQN1 1059 aa25.48■■□□□ 1.67
ATPAF1-213ENST00000574428 TTC30AQ86WT1 665 aa25.48■■□□□ 1.67
ATPAF1-213ENST00000574428 FUKQ8N0W3 1084 aa25.48■■□□□ 1.67
ATPAF1-213ENST00000574428 MYCBPAPQ8TBZ2 947 aa25.48■■□□□ 1.67
ATPAF1-213ENST00000574428 PCED1BQ96HM7 432 aa25.48■■□□□ 1.67
ATPAF1-213ENST00000574428 PKMYT1Q99640 499 aa25.48■■□□□ 1.67
ATPAF1-213ENST00000574428 B3GNT5Q9BYG0 378 aa25.48■■□□□ 1.67
ATPAF1-213ENST00000574428 ISCUQ9H1K1 167 aa25.48■■□□□ 1.67
ATPAF1-213ENST00000574428 LHX5Q9H2C1 402 aa25.48■■□□□ 1.67
ATPAF1-213ENST00000574428 LZTFL1Q9NQ48 299 aa25.48■■□□□ 1.67
ATPAF1-213ENST00000574428 TRIM10Q9UDY6 481 aa25.48■■□□□ 1.67
ATPAF1-213ENST00000574428 ABL1P00519 1130 aa25.47■■□□□ 1.67
ATPAF1-213ENST00000574428 ABCB4P21439 1286 aa25.47■■□□□ 1.67
ATPAF1-213ENST00000574428 NSFP46459 744 aaKnown RBP25.47■■□□□ 1.67
ATPAF1-213ENST00000574428 GALCP54803 685 aa25.47■■□□□ 1.67
ATPAF1-213ENST00000574428 ZNF280DQ6N043 979 aa25.47■■□□□ 1.67
ATPAF1-213ENST00000574428 PRSS55Q6UWB4 352 aaPredicted RBP25.47■■□□□ 1.67
ATPAF1-213ENST00000574428 LRRTM3Q86VH5 581 aa25.47■■□□□ 1.67
ATPAF1-213ENST00000574428 MED10Q9BTT4 135 aa25.47■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms