RNA–Protein interactions for RNA: ENST00000574070.5

CLDN7-207, Transcript of claudin 7, humanhuman

TSL 1 (best)

Gene CLDN7, Length 485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN7-207ENST00000574070 FAM163BP0C2L3 166 aa18.45■□□□□ 0.54
CLDN7-207ENST00000574070 PTPN2P17706 415 aa18.45■□□□□ 0.54
CLDN7-207ENST00000574070 FSHRP23945 695 aa18.45■□□□□ 0.54
CLDN7-207ENST00000574070 TUFMP49411 452 aaKnown RBP18.45■□□□□ 0.54
CLDN7-207ENST00000574070 EPHB3P54753 998 aa18.45■□□□□ 0.54
CLDN7-207ENST00000574070 NTHL1P78549 312 aa18.45■□□□□ 0.54
CLDN7-207ENST00000574070 CBWD6Q4V339 395 aa18.45■□□□□ 0.54
CLDN7-207ENST00000574070 CBWD3Q5JTY5 395 aa18.45■□□□□ 0.54
CLDN7-207ENST00000574070 CBWD5Q5RIA9 395 aa18.45■□□□□ 0.54
CLDN7-207ENST00000574070 CAVIN1Q6NZI2 390 aaKnown RBP18.45■□□□□ 0.54
CLDN7-207ENST00000574070 LIMS2Q7Z4I7 341 aa18.45■□□□□ 0.54
CLDN7-207ENST00000574070 SLC35C1Q96A29 364 aa18.45■□□□□ 0.54
CLDN7-207ENST00000574070 CORO1BQ9BR76 489 aa18.45■□□□□ 0.54
CLDN7-207ENST00000574070 CRISPLD1Q9H336 500 aa18.45■□□□□ 0.54
CLDN7-207ENST00000574070 TMLHEQ9NVH6 421 aa18.45■□□□□ 0.54
CLDN7-207ENST00000574070 HCFC1R1Q9NWW0 138 aa18.45■□□□□ 0.54
CLDN7-207ENST00000574070 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.45■□□□□ 0.54
CLDN7-207ENST00000574070 TRIOO75962 3097 aa18.44■□□□□ 0.54
CLDN7-207ENST00000574070 MYBPHLA2RUH7 354 aa18.44■□□□□ 0.54
CLDN7-207ENST00000574070 N4BP1O75113 896 aaKnown RBP18.44■□□□□ 0.54
CLDN7-207ENST00000574070 ATP2C2O75185 946 aa18.44■□□□□ 0.54
CLDN7-207ENST00000574070 SOAT2O75908 522 aa18.44■□□□□ 0.54
CLDN7-207ENST00000574070 POU2F2P09086 479 aa18.44■□□□□ 0.54
CLDN7-207ENST00000574070 PTMSP20962 102 aa18.44■□□□□ 0.54
CLDN7-207ENST00000574070 ERCC5P28715 1186 aaPredicted RBP18.44■□□□□ 0.54
CLDN7-207ENST00000574070 FMO5P49326 533 aa18.44■□□□□ 0.54
CLDN7-207ENST00000574070 CYP27A1Q02318 531 aa18.44■□□□□ 0.54
CLDN7-207ENST00000574070 CETN1Q12798 172 aa18.44■□□□□ 0.54
CLDN7-207ENST00000574070 PABPC1LQ4VXU2 614 aaKnown RBP18.44■□□□□ 0.54
CLDN7-207ENST00000574070 C4orf50Q6ZRC1 276 aa18.44■□□□□ 0.54
CLDN7-207ENST00000574070 RBM43Q6ZSC3 357 aaKnown RBP18.44■□□□□ 0.54
CLDN7-207ENST00000574070 OTOP3Q7RTS5 596 aa18.44■□□□□ 0.54
CLDN7-207ENST00000574070 TTC9BQ8N6N2 239 aa18.44■□□□□ 0.54
CLDN7-207ENST00000574070 CNOT6LQ96LI5 555 aaKnown RBP18.44■□□□□ 0.54
CLDN7-207ENST00000574070 APOBEC3GQ9HC16 384 aaKnown RBP18.44■□□□□ 0.54
CLDN7-207ENST00000574070 TMEM63CQ9P1W3 806 aa18.44■□□□□ 0.54
CLDN7-207ENST00000574070 DNMT3BQ9UBC3 853 aaKnown RBP18.44■□□□□ 0.54
CLDN7-207ENST00000574070 MAGEC2Q9UBF1 373 aaPredicted RBP18.44■□□□□ 0.54
CLDN7-207ENST00000574070 C2orf16Q68DN1 1984 aa18.44■□□□□ 0.54
CLDN7-207ENST00000574070 C19orf67A6NJJ6 358 aa18.43■□□□□ 0.54
CLDN7-207ENST00000574070 C2CD4DB7Z1M9 353 aa18.43■□□□□ 0.54
CLDN7-207ENST00000574070 LOC730098B7Z3J9 87 aa18.43■□□□□ 0.54
CLDN7-207ENST00000574070 LRRN2O75325 713 aa18.43■□□□□ 0.54
CLDN7-207ENST00000574070 PAPLNO95428 1278 aa18.43■□□□□ 0.54
CLDN7-207ENST00000574070 TRIM21P19474 475 aaKnown RBP18.43■□□□□ 0.54
CLDN7-207ENST00000574070 MTIF2P46199 727 aaKnown RBP18.43■□□□□ 0.54
CLDN7-207ENST00000574070 MCCD1P59942 119 aaPredicted RBP18.43■□□□□ 0.54
CLDN7-207ENST00000574070 VEPH1Q14D04 833 aa18.43■□□□□ 0.54
CLDN7-207ENST00000574070 MAPRE1Q15691 268 aaKnown RBP18.43■□□□□ 0.54
CLDN7-207ENST00000574070 TAF12Q16514 161 aa18.43■□□□□ 0.54
CLDN7-207ENST00000574070 STX1AQ16623 288 aa18.43■□□□□ 0.54
CLDN7-207ENST00000574070 MDH1BQ5I0G3 518 aa18.43■□□□□ 0.54
CLDN7-207ENST00000574070 CYP4A22Q5TCH4 519 aa18.43■□□□□ 0.54
CLDN7-207ENST00000574070 FAM114A1Q8IWE2 563 aa18.43■□□□□ 0.54
CLDN7-207ENST00000574070 SEMA4DQ92854 862 aa18.43■□□□□ 0.54
CLDN7-207ENST00000574070 MYLPFQ96A32 169 aa18.43■□□□□ 0.54
CLDN7-207ENST00000574070 NIF3L1Q9GZT8 377 aa18.43■□□□□ 0.54
CLDN7-207ENST00000574070 SDCBP2Q9H190 292 aa18.43■□□□□ 0.54
CLDN7-207ENST00000574070 DPEP3Q9H4B8 488 aa18.43■□□□□ 0.54
CLDN7-207ENST00000574070 ANO10Q9NW15 660 aa18.43■□□□□ 0.54
CLDN7-207ENST00000574070 HSFX1Q9UBD0 423 aa18.43■□□□□ 0.54
CLDN7-207ENST00000574070 USTQ9Y2C2 406 aa18.43■□□□□ 0.54
CLDN7-207ENST00000574070 AFPP02771 609 aaKnown RBP18.42■□□□□ 0.54
CLDN7-207ENST00000574070 RHOP08100 348 aa18.42■□□□□ 0.54
CLDN7-207ENST00000574070 HAPLN1P10915 354 aaPredicted RBP18.42■□□□□ 0.54
CLDN7-207ENST00000574070 MYL4P12829 197 aa18.42■□□□□ 0.54
CLDN7-207ENST00000574070 PTPN1P18031 435 aaKnown RBP18.42■□□□□ 0.54
CLDN7-207ENST00000574070 CD58P19256 250 aa18.42■□□□□ 0.54
CLDN7-207ENST00000574070 ASPAP45381 313 aa18.42■□□□□ 0.54
CLDN7-207ENST00000574070 KCNH2Q12809 1159 aa18.42■□□□□ 0.54
CLDN7-207ENST00000574070 LRMPQ12912 555 aa18.42■□□□□ 0.54
CLDN7-207ENST00000574070 CCDC142Q17RM4 750 aa18.42■□□□□ 0.54
CLDN7-207ENST00000574070 CT47A1Q5JQC4 288 aaPredicted RBP18.42■□□□□ 0.54
CLDN7-207ENST00000574070 PDZD4Q76G19 769 aaPredicted RBP18.42■□□□□ 0.54
CLDN7-207ENST00000574070 ITIH5Q86UX2 942 aa18.42■□□□□ 0.54
CLDN7-207ENST00000574070 TRIM59Q8IWR1 403 aa18.42■□□□□ 0.54
CLDN7-207ENST00000574070 SCN4BQ8IWT1 228 aa18.42■□□□□ 0.54
CLDN7-207ENST00000574070 PLCD3Q8N3E9 789 aa18.42■□□□□ 0.54
CLDN7-207ENST00000574070 GIPC2Q8TF65 315 aa18.42■□□□□ 0.54
CLDN7-207ENST00000574070 TNIP3Q96KP6 325 aa18.42■□□□□ 0.54
CLDN7-207ENST00000574070 MED15Q96RN5 788 aa18.42■□□□□ 0.54
CLDN7-207ENST00000574070 CRTAC1Q9NQ79 661 aa18.42■□□□□ 0.54
CLDN7-207ENST00000574070 ASAH2Q9NR71 780 aa18.42■□□□□ 0.54
CLDN7-207ENST00000574070 CEP72Q9P209 647 aa18.42■□□□□ 0.54
CLDN7-207ENST00000574070 MRPS23Q9Y3D9 190 aaKnown RBP18.42■□□□□ 0.54
CLDN7-207ENST00000574070 NME7Q9Y5B8 376 aa18.42■□□□□ 0.54
CLDN7-207ENST00000574070 CYP2F1P24903 491 aa18.41■□□□□ 0.54
CLDN7-207ENST00000574070 NDST1P52848 882 aa18.41■□□□□ 0.54
CLDN7-207ENST00000574070 MARSP56192 900 aaKnown RBP18.41■□□□□ 0.54
CLDN7-207ENST00000574070 HSP90AA4PQ58FG1 418 aa18.41■□□□□ 0.54
CLDN7-207ENST00000574070 FAM171BQ6P995 826 aa18.41■□□□□ 0.54
CLDN7-207ENST00000574070 HS6ST3Q8IZP7 471 aa18.41■□□□□ 0.54
CLDN7-207ENST00000574070 B3GALNT2Q8NCR0 500 aa18.41■□□□□ 0.54
CLDN7-207ENST00000574070 MYCBPAPQ8TBZ2 947 aa18.41■□□□□ 0.54
CLDN7-207ENST00000574070 PCED1BQ96HM7 432 aa18.41■□□□□ 0.54
CLDN7-207ENST00000574070 PKMYT1Q99640 499 aa18.41■□□□□ 0.54
CLDN7-207ENST00000574070 LPIN3Q9BQK8 851 aa18.41■□□□□ 0.54
CLDN7-207ENST00000574070 MED10Q9BTT4 135 aa18.41■□□□□ 0.54
CLDN7-207ENST00000574070 DNAI2Q9GZS0 605 aa18.41■□□□□ 0.54
CLDN7-207ENST00000574070 THAP9Q9H5L6 903 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms