RNA–Protein interactions for RNA: ENST00000573852.5

SCARF1-206, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 2,698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-206ENST00000573852 PTPN7P35236 360 aa20.06■□□□□ 0.8
SCARF1-206ENST00000573852 NLRP9Q7RTR0 991 aa20.06■□□□□ 0.8
SCARF1-206ENST00000573852 CYP39A1Q9NYL5 469 aa20.06■□□□□ 0.8
SCARF1-206ENST00000573852 K7ERI5 159 aa20.06■□□□□ 0.8
SCARF1-206ENST00000573852 CALB1P05937 261 aa20.06■□□□□ 0.8
SCARF1-206ENST00000573852 ABL2P42684 1182 aa20.06■□□□□ 0.8
SCARF1-206ENST00000573852 GDF10P55107 478 aa20.06■□□□□ 0.8
SCARF1-206ENST00000573852 TAF11Q15544 211 aa20.06■□□□□ 0.8
SCARF1-206ENST00000573852 ZNF394Q53GI3 561 aa20.06■□□□□ 0.8
SCARF1-206ENST00000573852 PPP1R15BQ5SWA1 713 aa20.06■□□□□ 0.8
SCARF1-206ENST00000573852 ZNF276Q8N554 614 aa20.06■□□□□ 0.8
SCARF1-206ENST00000573852 WDR83Q9BRX9 315 aaKnown RBP20.06■□□□□ 0.8
SCARF1-206ENST00000573852 A0A0B4J269 797 aa20.05■□□□□ 0.8
SCARF1-206ENST00000573852 WNT10BO00744 389 aa20.05■□□□□ 0.8
SCARF1-206ENST00000573852 NEBLO76041 1014 aa20.05■□□□□ 0.8
SCARF1-206ENST00000573852 TPBGLP0DKB5 382 aa20.05■□□□□ 0.8
SCARF1-206ENST00000573852 DYNLT1P63172 113 aa20.05■□□□□ 0.8
SCARF1-206ENST00000573852 MTM1Q13496 603 aa20.05■□□□□ 0.8
SCARF1-206ENST00000573852 CYP4A22Q5TCH4 519 aa20.05■□□□□ 0.8
SCARF1-206ENST00000573852 MTDHQ86UE4 582 aaKnown RBP20.05■□□□□ 0.8
SCARF1-206ENST00000573852 TAB3Q8N5C8 712 aaPredicted RBP20.05■□□□□ 0.8
SCARF1-206ENST00000573852 WDTC1Q8N5D0 677 aa20.05■□□□□ 0.8
SCARF1-206ENST00000573852 STK32AQ8WU08 396 aa20.05■□□□□ 0.8
SCARF1-206ENST00000573852 PPCSQ9HAB8 311 aa20.05■□□□□ 0.8
SCARF1-206ENST00000573852 KANSL3Q9P2N6 904 aa20.05■□□□□ 0.8
SCARF1-206ENST00000573852 ZNRF3Q9ULT6 936 aa20.05■□□□□ 0.8
SCARF1-206ENST00000573852 C3orf70A6NLC5 250 aaPredicted RBP20.05■□□□□ 0.8
SCARF1-206ENST00000573852 C2CD2LO14523 706 aa20.05■□□□□ 0.8
SCARF1-206ENST00000573852 ZWINTO95229 277 aa20.05■□□□□ 0.8
SCARF1-206ENST00000573852 APBA3O96018 575 aa20.05■□□□□ 0.8
SCARF1-206ENST00000573852 PIGRP01833 764 aa20.05■□□□□ 0.8
SCARF1-206ENST00000573852 HARSP12081 509 aaKnown RBP20.05■□□□□ 0.8
SCARF1-206ENST00000573852 ATP4AP20648 1035 aa20.05■□□□□ 0.8
SCARF1-206ENST00000573852 CTCFP49711 727 aaPredicted RBP20.05■□□□□ 0.8
SCARF1-206ENST00000573852 SLC45A4Q5BKX6 768 aa20.05■□□□□ 0.8
SCARF1-206ENST00000573852 XKR3Q5GH77 459 aa20.05■□□□□ 0.8
SCARF1-206ENST00000573852 SLFN12LQ6IEE8 588 aa20.05■□□□□ 0.8
SCARF1-206ENST00000573852 MTMR14Q8NCE2 650 aa20.05■□□□□ 0.8
SCARF1-206ENST00000573852 PYROXD1Q8WU10 500 aa20.05■□□□□ 0.8
SCARF1-206ENST00000573852 CPT1BQ92523 772 aa20.05■□□□□ 0.8
SCARF1-206ENST00000573852 ZFP69BQ9UJL9 534 aa20.05■□□□□ 0.8
SCARF1-206ENST00000573852 SNCAIPQ9Y6H5 919 aa20.05■□□□□ 0.8
SCARF1-206ENST00000573852 PLSCR1O15162 318 aa20.04■□□□□ 0.8
SCARF1-206ENST00000573852 ABCD1P33897 745 aa20.04■□□□□ 0.8
SCARF1-206ENST00000573852 TTC8Q8TAM2 541 aa20.04■□□□□ 0.8
SCARF1-206ENST00000573852 DEPTORQ8TB45 409 aa20.04■□□□□ 0.8
SCARF1-206ENST00000573852 NAF1Q96HR8 494 aaKnown RBP20.04■□□□□ 0.8
SCARF1-206ENST00000573852 NUDCD1Q96RS6 583 aa20.04■□□□□ 0.8
SCARF1-206ENST00000573852 KLF6Q99612 283 aaPredicted RBP20.04■□□□□ 0.8
SCARF1-206ENST00000573852 FAM167BQ9BTA0 163 aa20.04■□□□□ 0.8
SCARF1-206ENST00000573852 SSU72Q9NP77 194 aaKnown RBP20.04■□□□□ 0.8
SCARF1-206ENST00000573852 DDX56Q9NY93 547 aaKnown RBP20.04■□□□□ 0.8
SCARF1-206ENST00000573852 ADGRA2Q96PE1 1338 aa20.04■□□□□ 0.8
SCARF1-206ENST00000573852 GOLGA8RI6L899 631 aa20.04■□□□□ 0.8
SCARF1-206ENST00000573852 TRAFD1O14545 582 aaPredicted RBP20.04■□□□□ 0.8
SCARF1-206ENST00000573852 SMNDC1O75940 238 aaKnown RBP eCLIP20.04■□□□□ 0.8
SCARF1-206ENST00000573852 LDHAP00338 332 aaKnown RBP20.04■□□□□ 0.8
SCARF1-206ENST00000573852 RAD23BP54727 409 aa20.04■□□□□ 0.8
SCARF1-206ENST00000573852 OTUD4Q01804 1114 aaKnown RBP20.04■□□□□ 0.8
SCARF1-206ENST00000573852 OVGP1Q12889 678 aa20.04■□□□□ 0.8
SCARF1-206ENST00000573852 PIGHQ14442 188 aaPredicted RBP20.04■□□□□ 0.8
SCARF1-206ENST00000573852 CTC1Q2NKJ3 1217 aa20.04■□□□□ 0.8
SCARF1-206ENST00000573852 ADGRD1Q6QNK2 874 aa20.04■□□□□ 0.8
SCARF1-206ENST00000573852 C3orf62Q6ZUJ4 267 aa20.04■□□□□ 0.8
SCARF1-206ENST00000573852 RFWD2Q8NHY2 731 aa20.04■□□□□ 0.8
SCARF1-206ENST00000573852 ACTL9Q8TC94 416 aa20.04■□□□□ 0.8
SCARF1-206ENST00000573852 ZNF526Q8TF50 670 aaPredicted RBP20.04■□□□□ 0.8
SCARF1-206ENST00000573852 MZB1Q8WU39 189 aa20.04■□□□□ 0.8
SCARF1-206ENST00000573852 PAFAH2Q99487 392 aa20.04■□□□□ 0.8
SCARF1-206ENST00000573852 DCTN4Q9UJW0 460 aa20.04■□□□□ 0.8
SCARF1-206ENST00000573852 GPAT2Q6NUI2 795 aa20.03■□□□□ 0.8
SCARF1-206ENST00000573852 RHPN2Q8IUC4 686 aa20.03■□□□□ 0.8
SCARF1-206ENST00000573852 PPIL6Q8IXY8 311 aa20.03■□□□□ 0.8
SCARF1-206ENST00000573852 TCP10LQ8TDR4 215 aa20.03■□□□□ 0.8
SCARF1-206ENST00000573852 ZBED3Q96IU2 234 aaPredicted RBP20.03■□□□□ 0.8
SCARF1-206ENST00000573852 DHRS4Q9BTZ2 278 aa20.03■□□□□ 0.8
SCARF1-206ENST00000573852 PORCNQ9H237 461 aa20.03■□□□□ 0.8
SCARF1-206ENST00000573852 DENND2DQ9H6A0 471 aaPredicted RBP20.03■□□□□ 0.8
SCARF1-206ENST00000573852 SLC17A7Q9P2U7 560 aa20.03■□□□□ 0.8
SCARF1-206ENST00000573852 LRRC42Q9Y546 428 aa20.03■□□□□ 0.8
SCARF1-206ENST00000573852 TCRBV7S3A2A0A539 114 aa20.03■□□□□ 0.8
SCARF1-206ENST00000573852 RASSF2P50749 326 aa20.03■□□□□ 0.8
SCARF1-206ENST00000573852 BLMHQ13867 455 aa20.03■□□□□ 0.8
SCARF1-206ENST00000573852 SMTNL2Q2TAL5 461 aa20.03■□□□□ 0.8
SCARF1-206ENST00000573852 CLNKQ7Z7G1 428 aa20.03■□□□□ 0.8
SCARF1-206ENST00000573852 NAT8LQ8N9F0 302 aa20.03■□□□□ 0.8
SCARF1-206ENST00000573852 NSUN6Q8TEA1 469 aaKnown RBP20.03■□□□□ 0.8
SCARF1-206ENST00000573852 SPDL1Q96EA4 605 aa20.03■□□□□ 0.8
SCARF1-206ENST00000573852 TTLL13PA6NNM8 815 aa20.02■□□□□ 0.8
SCARF1-206ENST00000573852 ENTPD5O75356 428 aa20.02■□□□□ 0.8
SCARF1-206ENST00000573852 LSM8O95777 96 aaKnown RBP20.02■□□□□ 0.8
SCARF1-206ENST00000573852 ASS1P00966 412 aaKnown RBP20.02■□□□□ 0.8
SCARF1-206ENST00000573852 SUPT20HL2P0C7V6 817 aa20.02■□□□□ 0.8
SCARF1-206ENST00000573852 PTPN4P29074 926 aa20.02■□□□□ 0.8
SCARF1-206ENST00000573852 ARL4CP56559 192 aa20.02■□□□□ 0.8
SCARF1-206ENST00000573852 TGFB2P61812 414 aa20.02■□□□□ 0.8
SCARF1-206ENST00000573852 SUPT20HL1Q3ZLR7 823 aa20.02■□□□□ 0.8
SCARF1-206ENST00000573852 FYB2Q5VWT5 728 aa20.02■□□□□ 0.8
SCARF1-206ENST00000573852 ATP11CQ8NB49 1132 aa20.02■□□□□ 0.8
SCARF1-206ENST00000573852 TMEM35BQ8NCS4 154 aa20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms