RNA–Protein interactions for RNA: ENST00000573126.1

RPAIN-212, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 2,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-212ENST00000573126 MAGEB18Q96M61 343 aa11.82□□□□□ -0.52
RPAIN-212ENST00000573126 XYLT2Q9H1B5 865 aa11.82□□□□□ -0.52
RPAIN-212ENST00000573126 CYTH4Q9UIA0 394 aa11.82□□□□□ -0.52
RPAIN-212ENST00000573126 CPSF3Q9UKF6 684 aaKnown RBP11.82□□□□□ -0.52
RPAIN-212ENST00000573126 ARL2BPQ9Y2Y0 163 aa11.82□□□□□ -0.52
RPAIN-212ENST00000573126 LCTP09848 1927 aa11.82□□□□□ -0.52
RPAIN-212ENST00000573126 INO80B-WBP1J3KQ70 363 aa11.82□□□□□ -0.52
RPAIN-212ENST00000573126 ABLIM1O14639 778 aa11.82□□□□□ -0.52
RPAIN-212ENST00000573126 ARIH2O95376 493 aa11.82□□□□□ -0.52
RPAIN-212ENST00000573126 HOXC6P09630 235 aa11.82□□□□□ -0.52
RPAIN-212ENST00000573126 TAC1P20366 129 aa11.82□□□□□ -0.52
RPAIN-212ENST00000573126 CDH8P55286 799 aa11.82□□□□□ -0.52
RPAIN-212ENST00000573126 MGAT5Q09328 741 aa11.82□□□□□ -0.52
RPAIN-212ENST00000573126 DNAJC3Q13217 504 aa11.82□□□□□ -0.52
RPAIN-212ENST00000573126 NEDD9Q14511 834 aa11.82□□□□□ -0.52
RPAIN-212ENST00000573126 RNASEH2BQ5TBB1 312 aaKnown RBP11.82□□□□□ -0.52
RPAIN-212ENST00000573126 LBX2Q6XYB7 198 aa11.82□□□□□ -0.52
RPAIN-212ENST00000573126 PPP1R21Q6ZMI0 780 aa11.82□□□□□ -0.52
RPAIN-212ENST00000573126 TMEM192Q8IY95 271 aa11.82□□□□□ -0.52
RPAIN-212ENST00000573126 KIAA0319LQ8IZA0 1049 aa11.82□□□□□ -0.52
RPAIN-212ENST00000573126 TBC1D31Q96DN5 1066 aa11.82□□□□□ -0.52
RPAIN-212ENST00000573126 INO80BQ9C086 356 aaPredicted RBP11.82□□□□□ -0.52
RPAIN-212ENST00000573126 ECT2Q9H8V3 914 aa11.82□□□□□ -0.52
RPAIN-212ENST00000573126 LRCH4O75427 683 aa11.81□□□□□ -0.52
RPAIN-212ENST00000573126 CSDE1O75534 798 aaKnown RBP11.81□□□□□ -0.52
RPAIN-212ENST00000573126 PGK2P07205 417 aa11.81□□□□□ -0.52
RPAIN-212ENST00000573126 CD48P09326 243 aa11.81□□□□□ -0.52
RPAIN-212ENST00000573126 KRT3P12035 628 aa11.81□□□□□ -0.52
RPAIN-212ENST00000573126 EIF4BP23588 611 aaKnown RBP11.81□□□□□ -0.52
RPAIN-212ENST00000573126 AP3M2P53677 418 aa11.81□□□□□ -0.52
RPAIN-212ENST00000573126 VGLL4Q14135 290 aa11.81□□□□□ -0.52
RPAIN-212ENST00000573126 MORF4L2Q15014 288 aa11.81□□□□□ -0.52
RPAIN-212ENST00000573126 METTL7BQ6UX53 244 aa11.81□□□□□ -0.52
RPAIN-212ENST00000573126 ZBTB8OSQ8IWT0 167 aa11.81□□□□□ -0.52
RPAIN-212ENST00000573126 ARFGAP1Q8N6T3 406 aa11.81□□□□□ -0.52
RPAIN-212ENST00000573126 ACTL9Q8TC94 416 aa11.81□□□□□ -0.52
RPAIN-212ENST00000573126 SLC16A10Q8TF71 515 aa11.81□□□□□ -0.52
RPAIN-212ENST00000573126 PITPNM3Q9BZ71 974 aa11.81□□□□□ -0.52
RPAIN-212ENST00000573126 SLCO1B3Q9NPD5 702 aa11.81□□□□□ -0.52
RPAIN-212ENST00000573126 PCSK1NQ9UHG2 260 aa11.81□□□□□ -0.52
RPAIN-212ENST00000573126 SSC5DA1L4H1 1573 aa11.81□□□□□ -0.52
RPAIN-212ENST00000573126 CST8O60676 142 aa11.81□□□□□ -0.52
RPAIN-212ENST00000573126 ATP6V1G2O95670 118 aa11.81□□□□□ -0.52
RPAIN-212ENST00000573126 CXCL8P10145 99 aa11.81□□□□□ -0.52
RPAIN-212ENST00000573126 IL9RQ01113 521 aa11.81□□□□□ -0.52
RPAIN-212ENST00000573126 OTUD4Q01804 1114 aaKnown RBP11.81□□□□□ -0.52
RPAIN-212ENST00000573126 ANKRD22Q5VYY1 191 aa11.81□□□□□ -0.52
RPAIN-212ENST00000573126 EEF1DP3Q658K8 133 aa11.81□□□□□ -0.52
RPAIN-212ENST00000573126 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.81□□□□□ -0.52
RPAIN-212ENST00000573126 NKD2Q969F2 451 aaPredicted RBP11.81□□□□□ -0.52
RPAIN-212ENST00000573126 FOXP3Q9BZS1 431 aa11.81□□□□□ -0.52
RPAIN-212ENST00000573126 TRABDQ9H4I3 376 aa11.81□□□□□ -0.52
RPAIN-212ENST00000573126 KLHL14Q9P2G3 628 aa11.81□□□□□ -0.52
RPAIN-212ENST00000573126 TRIM33Q9UPN9 1127 aa11.81□□□□□ -0.52
RPAIN-212ENST00000573126 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.81□□□□□ -0.52
RPAIN-212ENST00000573126 ACTL7BQ9Y614 415 aa11.81□□□□□ -0.52
RPAIN-212ENST00000573126 C3orf70A6NLC5 250 aaPredicted RBP11.8□□□□□ -0.52
RPAIN-212ENST00000573126 ZBTB42B2RXF5 422 aa11.8□□□□□ -0.52
RPAIN-212ENST00000573126 IGF2BP3O00425 579 aaKnown RBP eCLIP11.8□□□□□ -0.52
RPAIN-212ENST00000573126 NOP56O00567 594 aaKnown RBP11.8□□□□□ -0.52
RPAIN-212ENST00000573126 ITGAVP06756 1048 aa11.8□□□□□ -0.52
RPAIN-212ENST00000573126 RPA3P35244 121 aaPredicted RBP11.8□□□□□ -0.52
RPAIN-212ENST00000573126 CTCFP49711 727 aaPredicted RBP11.8□□□□□ -0.52
RPAIN-212ENST00000573126 NRLP54845 237 aa11.8□□□□□ -0.52
RPAIN-212ENST00000573126 COPS2P61201 443 aa11.8□□□□□ -0.52
RPAIN-212ENST00000573126 PSMC1P62191 440 aaKnown RBP11.8□□□□□ -0.52
RPAIN-212ENST00000573126 EFTUD2Q15029 972 aaKnown RBP eCLIP11.8□□□□□ -0.52
RPAIN-212ENST00000573126 MTFR1Q15390 333 aa11.8□□□□□ -0.52
RPAIN-212ENST00000573126 HIF1AQ16665 826 aa11.8□□□□□ -0.52
RPAIN-212ENST00000573126 GALNTL6Q49A17 601 aa11.8□□□□□ -0.52
RPAIN-212ENST00000573126 IER5Q5VY09 327 aa11.8□□□□□ -0.52
RPAIN-212ENST00000573126 CDCA2Q69YH5 1023 aaPredicted RBP11.8□□□□□ -0.52
RPAIN-212ENST00000573126 CENPUQ71F23 418 aa11.8□□□□□ -0.52
RPAIN-212ENST00000573126 RIBC1Q8N443 379 aaPredicted RBP11.8□□□□□ -0.52
RPAIN-212ENST00000573126 SLC35B2Q8TB61 432 aa11.8□□□□□ -0.52
RPAIN-212ENST00000573126 PRCCQ92733 491 aaPredicted RBP11.8□□□□□ -0.52
RPAIN-212ENST00000573126 KLHL29Q96CT2 875 aa11.8□□□□□ -0.52
RPAIN-212ENST00000573126 TTC25Q96NG3 672 aa11.8□□□□□ -0.52
RPAIN-212ENST00000573126 CPXM1Q96SM3 734 aa11.8□□□□□ -0.52
RPAIN-212ENST00000573126 ZNF518BQ9C0D4 1074 aa11.8□□□□□ -0.52
RPAIN-212ENST00000573126 SYNCQ9H7C4 482 aa11.8□□□□□ -0.52
RPAIN-212ENST00000573126 NOD2Q9HC29 1040 aa11.8□□□□□ -0.52
RPAIN-212ENST00000573126 PCDH9Q9HC56 1237 aa11.8□□□□□ -0.52
RPAIN-212ENST00000573126 DDX56Q9NY93 547 aaKnown RBP11.8□□□□□ -0.52
RPAIN-212ENST00000573126 PRKAG3Q9UGI9 489 aa11.8□□□□□ -0.52
RPAIN-212ENST00000573126 GRID1Q9ULK0 1009 aa11.8□□□□□ -0.52
RPAIN-212ENST00000573126 DRG1Q9Y295 367 aaKnown RBP11.8□□□□□ -0.52
RPAIN-212ENST00000573126 A0A1W2PPM1 405 aa11.8□□□□□ -0.52
RPAIN-212ENST00000573126 ASMTLO95671 621 aa11.8□□□□□ -0.52
RPAIN-212ENST00000573126 CA4P22748 312 aa11.8□□□□□ -0.52
RPAIN-212ENST00000573126 EDNRBP24530 442 aa11.8□□□□□ -0.52
RPAIN-212ENST00000573126 SSTR1P30872 391 aa11.8□□□□□ -0.52
RPAIN-212ENST00000573126 BAG6P46379 1132 aa11.8□□□□□ -0.52
RPAIN-212ENST00000573126 SLC25A11Q02978 314 aaKnown RBP11.8□□□□□ -0.52
RPAIN-212ENST00000573126 BNIP1Q12981 228 aa11.8□□□□□ -0.52
RPAIN-212ENST00000573126 MKRN3Q13064 507 aaKnown RBP11.8□□□□□ -0.52
RPAIN-212ENST00000573126 MXD4Q14582 209 aaPredicted RBP11.8□□□□□ -0.52
RPAIN-212ENST00000573126 TAF5Q15542 800 aa11.8□□□□□ -0.52
RPAIN-212ENST00000573126 DPH6Q7L8W6 267 aa11.8□□□□□ -0.52
RPAIN-212ENST00000573126 ECHDC2Q86YB7 292 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms