RNA–Protein interactions for RNA: ENST00000572760.5

NPLOC4-209, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best) BASIC

Gene NPLOC4, Length 946 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-209ENST00000572760 TMEM270Q6UE05 265 aa15.46■□□□□ 0.07
NPLOC4-209ENST00000572760 CCDC149Q6ZUS6 474 aa15.46■□□□□ 0.07
NPLOC4-209ENST00000572760 LRRTM3Q86VH5 581 aa15.46■□□□□ 0.07
NPLOC4-209ENST00000572760 SPATA2LQ8IUW3 424 aaPredicted RBP15.46■□□□□ 0.07
NPLOC4-209ENST00000572760 B3GALNT2Q8NCR0 500 aa15.46■□□□□ 0.07
NPLOC4-209ENST00000572760 MAFAQ8NHW3 353 aaPredicted RBP15.46■□□□□ 0.07
NPLOC4-209ENST00000572760 C2orf15Q8WU43 125 aaKnown RBP15.46■□□□□ 0.07
NPLOC4-209ENST00000572760 JAKMIP2Q96AA8 810 aa15.46■□□□□ 0.07
NPLOC4-209ENST00000572760 HEXIM2Q96MH2 286 aaKnown RBP15.46■□□□□ 0.07
NPLOC4-209ENST00000572760 KREMEN1Q96MU8 473 aa15.46■□□□□ 0.07
NPLOC4-209ENST00000572760 MED10Q9BTT4 135 aa15.46■□□□□ 0.07
NPLOC4-209ENST00000572760 DPEP3Q9H4B8 488 aa15.46■□□□□ 0.07
NPLOC4-209ENST00000572760 PLEKHA4Q9H4M7 779 aa15.46■□□□□ 0.07
NPLOC4-209ENST00000572760 SIX2Q9NPC8 291 aa15.46■□□□□ 0.07
NPLOC4-209ENST00000572760 PLCB1Q9NQ66 1216 aa15.46■□□□□ 0.07
NPLOC4-209ENST00000572760 MAN1C1Q9NR34 630 aa15.46■□□□□ 0.07
NPLOC4-209ENST00000572760 ABI2Q9NYB9 513 aaPredicted RBP15.46■□□□□ 0.07
NPLOC4-209ENST00000572760 FBXW11Q9UKB1 542 aa15.46■□□□□ 0.07
NPLOC4-209ENST00000572760 NME7Q9Y5B8 376 aa15.46■□□□□ 0.07
NPLOC4-209ENST00000572760 PCDHB5Q9Y5E4 795 aa15.46■□□□□ 0.07
NPLOC4-209ENST00000572760 MTMR11A4FU01 709 aa15.45■□□□□ 0.06
NPLOC4-209ENST00000572760 ABLIM3O94929 683 aa15.45■□□□□ 0.06
NPLOC4-209ENST00000572760 ATF2P15336 505 aa15.45■□□□□ 0.06
NPLOC4-209ENST00000572760 CD19P15391 556 aa15.45■□□□□ 0.06
NPLOC4-209ENST00000572760 POLR2FP61218 127 aaKnown RBP15.45■□□□□ 0.06
NPLOC4-209ENST00000572760 ADAM15Q13444 863 aa15.45■□□□□ 0.06
NPLOC4-209ENST00000572760 IQCEQ6IPM2 695 aa15.45■□□□□ 0.06
NPLOC4-209ENST00000572760 LILRA6Q6PI73 481 aa15.45■□□□□ 0.06
NPLOC4-209ENST00000572760 CACNA2D4Q7Z3S7 1137 aa15.45■□□□□ 0.06
NPLOC4-209ENST00000572760 ATAD1Q8NBU5 361 aa15.45■□□□□ 0.06
NPLOC4-209ENST00000572760 MYCBPAPQ8TBZ2 947 aa15.45■□□□□ 0.06
NPLOC4-209ENST00000572760 SPPL2BQ8TCT7 592 aa15.45■□□□□ 0.06
NPLOC4-209ENST00000572760 HDAC7Q8WUI4 952 aa15.45■□□□□ 0.06
NPLOC4-209ENST00000572760 MYLPFQ96A32 169 aa15.45■□□□□ 0.06
NPLOC4-209ENST00000572760 TMEM176AQ96HP8 235 aa15.45■□□□□ 0.06
NPLOC4-209ENST00000572760 TWNKQ96RR1 684 aa15.45■□□□□ 0.06
NPLOC4-209ENST00000572760 TRIM5Q9C035 493 aa15.45■□□□□ 0.06
NPLOC4-209ENST00000572760 XPO4Q9C0E2 1151 aaKnown RBP15.45■□□□□ 0.06
NPLOC4-209ENST00000572760 ELOVL4Q9GZR5 314 aa15.45■□□□□ 0.06
NPLOC4-209ENST00000572760 CRTAC1Q9NQ79 661 aa15.45■□□□□ 0.06
NPLOC4-209ENST00000572760 DZANK1Q9NVP4 752 aa15.45■□□□□ 0.06
NPLOC4-209ENST00000572760 HMGXB4Q9UGU5 601 aa15.45■□□□□ 0.06
NPLOC4-209ENST00000572760 MAFFQ9ULX9 164 aa15.45■□□□□ 0.06
NPLOC4-209ENST00000572760 SIK3Q9Y2K2 1263 aa15.45■□□□□ 0.06
NPLOC4-209ENST00000572760 FHOD1Q9Y613 1164 aa15.45■□□□□ 0.06
NPLOC4-209ENST00000572760 TRANK1O15050 2925 aa15.45■□□□□ 0.06
NPLOC4-209ENST00000572760 ATP8B3O60423 1300 aa15.44■□□□□ 0.06
NPLOC4-209ENST00000572760 A0A1W2PQC6 194 aa15.44■□□□□ 0.06
NPLOC4-209ENST00000572760 LINC01565O15544 149 aa15.44■□□□□ 0.06
NPLOC4-209ENST00000572760 C8AP07357 584 aa15.44■□□□□ 0.06
NPLOC4-209ENST00000572760 UCHL3P15374 230 aa15.44■□□□□ 0.06
NPLOC4-209ENST00000572760 RBM10P98175 930 aaKnown RBP15.44■□□□□ 0.06
NPLOC4-209ENST00000572760 DUSP4Q13115 394 aa15.44■□□□□ 0.06
NPLOC4-209ENST00000572760 PTPN21Q16825 1174 aa15.44■□□□□ 0.06
NPLOC4-209ENST00000572760 MGAT5BQ3V5L5 792 aa15.44■□□□□ 0.06
NPLOC4-209ENST00000572760 PPM1LQ5SGD2 360 aa15.44■□□□□ 0.06
NPLOC4-209ENST00000572760 FAM171BQ6P995 826 aa15.44■□□□□ 0.06
NPLOC4-209ENST00000572760 CRYBG2Q8N1P7 616 aa15.44■□□□□ 0.06
NPLOC4-209ENST00000572760 RBBP8NLQ8NC74 664 aaPredicted RBP15.44■□□□□ 0.06
NPLOC4-209ENST00000572760 WHAMMQ8TF30 809 aa15.44■□□□□ 0.06
NPLOC4-209ENST00000572760 PABPC5Q96DU9 382 aaKnown RBP15.44■□□□□ 0.06
NPLOC4-209ENST00000572760 SPAG5Q96R06 1193 aa15.44■□□□□ 0.06
NPLOC4-209ENST00000572760 SEPT5Q99719 369 aaPredicted RBP15.44■□□□□ 0.06
NPLOC4-209ENST00000572760 NLRC4Q9NPP4 1024 aa15.44■□□□□ 0.06
NPLOC4-209ENST00000572760 TMLHEQ9NVH6 421 aa15.44■□□□□ 0.06
NPLOC4-209ENST00000572760 SLC27A5Q9Y2P5 690 aa15.44■□□□□ 0.06
NPLOC4-209ENST00000572760 DAAM1Q9Y4D1 1078 aa15.44■□□□□ 0.06
NPLOC4-209ENST00000572760 C2orf16Q68DN1 1984 aa15.44■□□□□ 0.06
NPLOC4-209ENST00000572760 SEC24AO95486 1093 aa15.43■□□□□ 0.06
NPLOC4-209ENST00000572760 LRG1P02750 347 aa15.43■□□□□ 0.06
NPLOC4-209ENST00000572760 ACO1P21399 889 aaKnown RBP15.43■□□□□ 0.06
NPLOC4-209ENST00000572760 ALDH1A3P47895 512 aa15.43■□□□□ 0.06
NPLOC4-209ENST00000572760 TUFMP49411 452 aaKnown RBP15.43■□□□□ 0.06
NPLOC4-209ENST00000572760 RAD23BP54727 409 aa15.43■□□□□ 0.06
NPLOC4-209ENST00000572760 DRAP1Q14919 205 aaPredicted RBP15.43■□□□□ 0.06
NPLOC4-209ENST00000572760 UVSSAQ2YD98 709 aa15.43■□□□□ 0.06
NPLOC4-209ENST00000572760 TCEAL8Q8IYN2 117 aa15.43■□□□□ 0.06
NPLOC4-209ENST00000572760 UBR7Q8N806 425 aa15.43■□□□□ 0.06
NPLOC4-209ENST00000572760 VN1R2Q8NFZ6 395 aa15.43■□□□□ 0.06
NPLOC4-209ENST00000572760 SLC7A14Q8TBB6 771 aa15.43■□□□□ 0.06
NPLOC4-209ENST00000572760 CYFIP2Q96F07 1278 aa15.43■□□□□ 0.06
NPLOC4-209ENST00000572760 PCED1BQ96HM7 432 aa15.43■□□□□ 0.06
NPLOC4-209ENST00000572760 FUBP3Q96I24 572 aaKnown RBP eCLIP15.43■□□□□ 0.06
NPLOC4-209ENST00000572760 PKMYT1Q99640 499 aa15.43■□□□□ 0.06
NPLOC4-209ENST00000572760 LPIN3Q9BQK8 851 aa15.43■□□□□ 0.06
NPLOC4-209ENST00000572760 STK33Q9BYT3 514 aa15.43■□□□□ 0.06
NPLOC4-209ENST00000572760 GANQ9H2C0 597 aa15.43■□□□□ 0.06
NPLOC4-209ENST00000572760 FAM49BQ9NUQ9 324 aa15.43■□□□□ 0.06
NPLOC4-209ENST00000572760 KIAA1257Q9ULG3 409 aa15.43■□□□□ 0.06
NPLOC4-209ENST00000572760 ZNF638Q14966 1978 aaKnown RBP15.43■□□□□ 0.06
NPLOC4-209ENST00000572760 ZMYND10O75800 440 aa15.42■□□□□ 0.06
NPLOC4-209ENST00000572760 GLP2RO95838 553 aa15.42■□□□□ 0.06
NPLOC4-209ENST00000572760 PAEPP09466 180 aa15.42■□□□□ 0.06
NPLOC4-209ENST00000572760 BDNFP23560 247 aa15.42■□□□□ 0.06
NPLOC4-209ENST00000572760 ADORA2BP29275 332 aa15.42■□□□□ 0.06
NPLOC4-209ENST00000572760 PLD1Q13393 1074 aa15.42■□□□□ 0.06
NPLOC4-209ENST00000572760 KCNC3Q14003 757 aa15.42■□□□□ 0.06
NPLOC4-209ENST00000572760 CCDC142Q17RM4 750 aa15.42■□□□□ 0.06
NPLOC4-209ENST00000572760 SGO2Q562F6 1265 aa15.42■□□□□ 0.06
NPLOC4-209ENST00000572760 ANKRD54Q6NXT1 300 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms