RNA–Protein interactions for RNA: ENST00000572270.1

CCDC40-208, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 460 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-208ENST00000572270 TTC16Q8NEE8 873 aa14.2□□□□□ -0.14
CCDC40-208ENST00000572270 OSCP1Q8WVF1 389 aa14.2□□□□□ -0.14
CCDC40-208ENST00000572270 KIF2CQ99661 725 aa14.2□□□□□ -0.14
CCDC40-208ENST00000572270 KIFC3Q9BVG8 833 aa14.2□□□□□ -0.14
CCDC40-208ENST00000572270 CDT1Q9H211 546 aa14.2□□□□□ -0.14
CCDC40-208ENST00000572270 PCDHA12Q9UN75 941 aa14.2□□□□□ -0.14
CCDC40-208ENST00000572270 LARGE1O95461 756 aa14.19□□□□□ -0.14
CCDC40-208ENST00000572270 CCT2P78371 535 aaKnown RBP14.19□□□□□ -0.14
CCDC40-208ENST00000572270 MRPS21P82921 87 aaKnown RBP14.19□□□□□ -0.14
CCDC40-208ENST00000572270 ZNF268Q14587 947 aaPredicted RBP14.19□□□□□ -0.14
CCDC40-208ENST00000572270 NPY5RQ15761 445 aa14.19□□□□□ -0.14
CCDC40-208ENST00000572270 MAP7D1Q3KQU3 841 aa14.19□□□□□ -0.14
CCDC40-208ENST00000572270 OVOS1Q6IE37 1185 aa14.19□□□□□ -0.14
CCDC40-208ENST00000572270 TMEM92Q6UXU6 159 aa14.19□□□□□ -0.14
CCDC40-208ENST00000572270 DSTYKQ6XUX3 929 aa14.19□□□□□ -0.14
CCDC40-208ENST00000572270 SLC36A4Q6YBV0 504 aa14.19□□□□□ -0.14
CCDC40-208ENST00000572270 GLRX5Q86SX6 157 aa14.19□□□□□ -0.14
CCDC40-208ENST00000572270 SLCO6A1Q86UG4 719 aa14.19□□□□□ -0.14
CCDC40-208ENST00000572270 RASEFQ8IZ41 740 aa14.19□□□□□ -0.14
CCDC40-208ENST00000572270 GALNT15Q8N3T1 639 aa14.19□□□□□ -0.14
CCDC40-208ENST00000572270 RIN3Q8TB24 985 aa14.19□□□□□ -0.14
CCDC40-208ENST00000572270 HMGB4Q8WW32 186 aa14.19□□□□□ -0.14
CCDC40-208ENST00000572270 MRPS31Q92665 395 aaKnown RBP14.19□□□□□ -0.14
CCDC40-208ENST00000572270 NCOA5Q9HCD5 579 aaKnown RBP14.19□□□□□ -0.14
CCDC40-208ENST00000572270 KIAA1522Q9P206 1035 aaPredicted RBP14.19□□□□□ -0.14
CCDC40-208ENST00000572270 GON4LQ3T8J9 2241 aa14.19□□□□□ -0.14
CCDC40-208ENST00000572270 OBSL1O75147 1896 aa14.18□□□□□ -0.14
CCDC40-208ENST00000572270 TRABD2BA6NFA1 517 aa14.18□□□□□ -0.14
CCDC40-208ENST00000572270 K7EQS6 105 aa14.18□□□□□ -0.14
CCDC40-208ENST00000572270 K7ERI5 159 aa14.18□□□□□ -0.14
CCDC40-208ENST00000572270 CPA1P15085 419 aa14.18□□□□□ -0.14
CCDC40-208ENST00000572270 ATF6P18850 670 aa14.18□□□□□ -0.14
CCDC40-208ENST00000572270 NMT1P30419 496 aaKnown RBP14.18□□□□□ -0.14
CCDC40-208ENST00000572270 ZNF33AQ06730 810 aa14.18□□□□□ -0.14
CCDC40-208ENST00000572270 TXNDC8Q6A555 127 aa14.18□□□□□ -0.14
CCDC40-208ENST00000572270 PIK3AP1Q6ZUJ8 805 aa14.18□□□□□ -0.14
CCDC40-208ENST00000572270 GIPC2Q8TF65 315 aa14.18□□□□□ -0.14
CCDC40-208ENST00000572270 CLMPQ9H6B4 373 aa14.18□□□□□ -0.14
CCDC40-208ENST00000572270 TUBGCP4Q9UGJ1 667 aa14.18□□□□□ -0.14
CCDC40-208ENST00000572270 WNT6Q9Y6F9 365 aa14.18□□□□□ -0.14
CCDC40-208ENST00000572270 ZNF462Q96JM2 2506 aa14.18□□□□□ -0.14
CCDC40-208ENST00000572270 GJB3O75712 270 aa14.17□□□□□ -0.14
CCDC40-208ENST00000572270 KLF8O95600 359 aaPredicted RBP14.17□□□□□ -0.14
CCDC40-208ENST00000572270 NLRP12P59046 1061 aa14.17□□□□□ -0.14
CCDC40-208ENST00000572270 FAM160A1Q05DH4 1040 aa14.17□□□□□ -0.14
CCDC40-208ENST00000572270 EML3Q32P44 896 aa14.17□□□□□ -0.14
CCDC40-208ENST00000572270 PLEKHG6Q3KR16 790 aa14.17□□□□□ -0.14
CCDC40-208ENST00000572270 HSF5Q4G112 596 aaPredicted RBP14.17□□□□□ -0.14
CCDC40-208ENST00000572270 SLC39A12Q504Y0 691 aa14.17□□□□□ -0.14
CCDC40-208ENST00000572270 EOGTQ5NDL2 527 aa14.17□□□□□ -0.14
CCDC40-208ENST00000572270 LRRC69Q6ZNQ3 347 aa14.17□□□□□ -0.14
CCDC40-208ENST00000572270 DEFB119Q8N690 84 aa14.17□□□□□ -0.14
CCDC40-208ENST00000572270 ALLCQ8N6M5 410 aa14.17□□□□□ -0.14
CCDC40-208ENST00000572270 TXNDC5Q8NBS9 432 aaKnown RBP14.17□□□□□ -0.14
CCDC40-208ENST00000572270 SETD7Q8WTS6 366 aaKnown RBP14.17□□□□□ -0.14
CCDC40-208ENST00000572270 PNMA5Q96PV4 448 aa14.17□□□□□ -0.14
CCDC40-208ENST00000572270 ACO2Q99798 780 aaKnown RBP14.17□□□□□ -0.14
CCDC40-208ENST00000572270 TCHPQ9BT92 498 aa14.17□□□□□ -0.14
CCDC40-208ENST00000572270 TTC12Q9H892 705 aaPredicted RBP14.17□□□□□ -0.14
CCDC40-208ENST00000572270 KCNJ14Q9UNX9 436 aa14.17□□□□□ -0.14
CCDC40-208ENST00000572270 PHLPP2Q6ZVD8 1323 aa14.16□□□□□ -0.14
CCDC40-208ENST00000572270 MYO18BQ8IUG5 2567 aa14.16□□□□□ -0.14
CCDC40-208ENST00000572270 A0A1W2PQD8 194 aa14.16□□□□□ -0.14
CCDC40-208ENST00000572270 TCRBV21S2A2A0A5A6 115 aa14.16□□□□□ -0.14
CCDC40-208ENST00000572270 ARHGEF35A5YM69 484 aa14.16□□□□□ -0.14
CCDC40-208ENST00000572270 CPLX1O14810 134 aa14.16□□□□□ -0.14
CCDC40-208ENST00000572270 NFATC1O95644 943 aa14.16□□□□□ -0.14
CCDC40-208ENST00000572270 MCF2P10911 925 aa14.16□□□□□ -0.14
CCDC40-208ENST00000572270 ODC1P11926 461 aa14.16□□□□□ -0.14
CCDC40-208ENST00000572270 HARSP12081 509 aaKnown RBP14.16□□□□□ -0.14
CCDC40-208ENST00000572270 HNRNPLP14866 589 aaKnown RBP eCLIP14.16□□□□□ -0.14
CCDC40-208ENST00000572270 CYP11B2P19099 503 aa14.16□□□□□ -0.14
CCDC40-208ENST00000572270 TYMPP19971 482 aa14.16□□□□□ -0.14
CCDC40-208ENST00000572270 CFHR1Q03591 330 aa14.16□□□□□ -0.14
CCDC40-208ENST00000572270 DMP1Q13316 513 aaPredicted RBP14.16□□□□□ -0.14
CCDC40-208ENST00000572270 ZNF77Q15935 545 aa14.16□□□□□ -0.14
CCDC40-208ENST00000572270 CALCRLQ16602 461 aa14.16□□□□□ -0.14
CCDC40-208ENST00000572270 BLOC1S2Q6QNY1 142 aa14.16□□□□□ -0.14
CCDC40-208ENST00000572270 PADI6Q6TGC4 694 aa14.16□□□□□ -0.14
CCDC40-208ENST00000572270 MON1AQ86VX9 555 aa14.16□□□□□ -0.14
CCDC40-208ENST00000572270 EFCAB13Q8IY85 973 aa14.16□□□□□ -0.14
CCDC40-208ENST00000572270 PDCD7Q8N8D1 485 aaKnown RBP14.16□□□□□ -0.14
CCDC40-208ENST00000572270 FCRL3Q96P31 734 aaPredicted RBP14.16□□□□□ -0.14
CCDC40-208ENST00000572270 MRPL4Q9BYD3 311 aaKnown RBP14.16□□□□□ -0.14
CCDC40-208ENST00000572270 PRORYQ9H606 182 aa14.16□□□□□ -0.14
CCDC40-208ENST00000572270 SUSD2Q9UGT4 822 aa14.16□□□□□ -0.14
CCDC40-208ENST00000572270 PCOLCE2Q9UKZ9 415 aa14.16□□□□□ -0.14
CCDC40-208ENST00000572270 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.16□□□□□ -0.14
CCDC40-208ENST00000572270 SGK1O00141 431 aa14.15□□□□□ -0.14
CCDC40-208ENST00000572270 F11P03951 625 aa14.15□□□□□ -0.14
CCDC40-208ENST00000572270 GNSP15586 552 aa14.15□□□□□ -0.14
CCDC40-208ENST00000572270 TIE1P35590 1138 aa14.15□□□□□ -0.14
CCDC40-208ENST00000572270 AARSP49588 968 aaKnown RBP eCLIP14.15□□□□□ -0.14
CCDC40-208ENST00000572270 USP4Q13107 963 aa14.15□□□□□ -0.14
CCDC40-208ENST00000572270 TMEM150AQ86TG1 271 aa14.15□□□□□ -0.14
CCDC40-208ENST00000572270 RGL4Q8IZJ4 473 aa14.15□□□□□ -0.14
CCDC40-208ENST00000572270 C2orf15Q8WU43 125 aaKnown RBP14.15□□□□□ -0.14
CCDC40-208ENST00000572270 DRC1Q96MC2 740 aa14.15□□□□□ -0.14
CCDC40-208ENST00000572270 AIFM3Q96NN9 605 aa14.15□□□□□ -0.14
CCDC40-208ENST00000572270 HNRNPABQ99729 332 aaKnown RBP14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms