RNA–Protein interactions for RNA: ENST00000571995.5

RAB40B-206, Transcript of RAB40B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40B, Length 3,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-206ENST00000571995 A6NNZ2 444 aa17.04■□□□□ 0.32
RAB40B-206ENST00000571995 EDN1P05305 212 aa17.04■□□□□ 0.32
RAB40B-206ENST00000571995 CYP2C9P11712 490 aa17.04■□□□□ 0.32
RAB40B-206ENST00000571995 SDC4P31431 198 aa17.04■□□□□ 0.32
RAB40B-206ENST00000571995 NOMO3P69849 1222 aa17.04■□□□□ 0.32
RAB40B-206ENST00000571995 TUBB8Q3ZCM7 444 aa17.04■□□□□ 0.32
RAB40B-206ENST00000571995 CENPUQ71F23 418 aa17.04■□□□□ 0.32
RAB40B-206ENST00000571995 FAM81BQ96LP2 452 aa17.04■□□□□ 0.32
RAB40B-206ENST00000571995 C17orf75Q9HAS0 396 aa17.04■□□□□ 0.32
RAB40B-206ENST00000571995 ARHGAP28Q9P2N2 729 aa17.04■□□□□ 0.32
RAB40B-206ENST00000571995 HMGXB4Q9UGU5 601 aa17.04■□□□□ 0.32
RAB40B-206ENST00000571995 SNAPC2Q13487 334 aa17.04■□□□□ 0.32
RAB40B-206ENST00000571995 RCN2Q14257 317 aa17.04■□□□□ 0.32
RAB40B-206ENST00000571995 SH3PXD2AQ5TCZ1 1133 aa17.04■□□□□ 0.32
RAB40B-206ENST00000571995 IL31Q6EBC2 164 aa17.04■□□□□ 0.32
RAB40B-206ENST00000571995 C3orf62Q6ZUJ4 267 aa17.04■□□□□ 0.32
RAB40B-206ENST00000571995 ZC3H3Q8IXZ2 948 aaKnown RBP17.04■□□□□ 0.32
RAB40B-206ENST00000571995 RASGEF1CQ8N431 466 aa17.04■□□□□ 0.32
RAB40B-206ENST00000571995 REPS2Q8NFH8 660 aa17.04■□□□□ 0.32
RAB40B-206ENST00000571995 RILPQ96NA2 401 aa17.04■□□□□ 0.32
RAB40B-206ENST00000571995 B3GNT5Q9BYG0 378 aa17.04■□□□□ 0.32
RAB40B-206ENST00000571995 HAPLN2Q9GZV7 340 aa17.04■□□□□ 0.32
RAB40B-206ENST00000571995 GRIN2DO15399 1336 aa17.04■□□□□ 0.32
RAB40B-206ENST00000571995 SCN9AQ15858 1988 aa17.04■□□□□ 0.32
RAB40B-206ENST00000571995 MYO7AQ13402 2215 aa17.04■□□□□ 0.32
RAB40B-206ENST00000571995 KNL1Q8NG31 2342 aa17.04■□□□□ 0.32
RAB40B-206ENST00000571995 CYP1A2P05177 515 aa17.03■□□□□ 0.32
RAB40B-206ENST00000571995 NDST1P52848 882 aa17.03■□□□□ 0.32
RAB40B-206ENST00000571995 MPZL3Q6UWV2 235 aa17.03■□□□□ 0.32
RAB40B-206ENST00000571995 SPOCK2Q92563 424 aa17.03■□□□□ 0.32
RAB40B-206ENST00000571995 SH3GL2Q99962 352 aa17.03■□□□□ 0.32
RAB40B-206ENST00000571995 AP5M1Q9H0R1 490 aa17.03■□□□□ 0.32
RAB40B-206ENST00000571995 CNOT10Q9H9A5 744 aaKnown RBP17.03■□□□□ 0.32
RAB40B-206ENST00000571995 NAALADL1Q9UQQ1 740 aa17.03■□□□□ 0.32
RAB40B-206ENST00000571995 SUN1O94901 812 aa17.03■□□□□ 0.32
RAB40B-206ENST00000571995 RARGP13631 454 aa17.03■□□□□ 0.32
RAB40B-206ENST00000571995 HUNKP57058 714 aa17.03■□□□□ 0.32
RAB40B-206ENST00000571995 MYBPC2Q14324 1141 aa17.03■□□□□ 0.32
RAB40B-206ENST00000571995 HIF1AQ16665 826 aa17.03■□□□□ 0.32
RAB40B-206ENST00000571995 FOXR2Q6PJQ5 311 aa17.03■□□□□ 0.32
RAB40B-206ENST00000571995 ZDHHC24Q6UX98 284 aa17.03■□□□□ 0.32
RAB40B-206ENST00000571995 CCDC91Q7Z6B0 441 aa17.03■□□□□ 0.32
RAB40B-206ENST00000571995 FAM131BQ86XD5 332 aa17.03■□□□□ 0.32
RAB40B-206ENST00000571995 DNAJB3Q8WWF6 145 aa17.03■□□□□ 0.32
RAB40B-206ENST00000571995 HBP1O60381 514 aa17.03■□□□□ 0.32
RAB40B-206ENST00000571995 ITIH2P19823 946 aa17.03■□□□□ 0.32
RAB40B-206ENST00000571995 CTCFP49711 727 aaPredicted RBP17.03■□□□□ 0.32
RAB40B-206ENST00000571995 PEX5P50542 639 aa17.03■□□□□ 0.32
RAB40B-206ENST00000571995 GAD2Q05329 585 aa17.03■□□□□ 0.32
RAB40B-206ENST00000571995 GOLGA7BQ2TAP0 167 aa17.03■□□□□ 0.32
RAB40B-206ENST00000571995 DPY19L2P1Q6NXN4 242 aa17.03■□□□□ 0.32
RAB40B-206ENST00000571995 LBX2Q6XYB7 198 aa17.03■□□□□ 0.32
RAB40B-206ENST00000571995 KIRREL3Q8IZU9 778 aa17.03■□□□□ 0.32
RAB40B-206ENST00000571995 CCDC110Q8TBZ0 833 aa17.03■□□□□ 0.32
RAB40B-206ENST00000571995 CFAP57Q96MR6 1250 aa17.03■□□□□ 0.32
RAB40B-206ENST00000571995 TRABDQ9H4I3 376 aa17.03■□□□□ 0.32
RAB40B-206ENST00000571995 GRHL1Q9NZI5 618 aa17.03■□□□□ 0.32
RAB40B-206ENST00000571995 ABT1Q9ULW3 272 aaKnown RBP17.03■□□□□ 0.32
RAB40B-206ENST00000571995 HCRTO43612 131 aa17.02■□□□□ 0.32
RAB40B-206ENST00000571995 MOCS2O96007 188 aaPredicted RBP17.02■□□□□ 0.32
RAB40B-206ENST00000571995 C4BPAP04003 597 aaKnown RBP17.02■□□□□ 0.32
RAB40B-206ENST00000571995 ECHS1P30084 290 aa17.02■□□□□ 0.32
RAB40B-206ENST00000571995 FASTKD5Q7L8L6 764 aaKnown RBP17.02■□□□□ 0.32
RAB40B-206ENST00000571995 DNAAF3Q8N9W5 541 aa17.02■□□□□ 0.32
RAB40B-206ENST00000571995 NINJ2Q9NZG7 142 aa17.02■□□□□ 0.32
RAB40B-206ENST00000571995 LAMB2P55268 1798 aa17.02■□□□□ 0.32
RAB40B-206ENST00000571995 A0A0B4J269 797 aa17.02■□□□□ 0.32
RAB40B-206ENST00000571995 IL9RQ01113 521 aa17.02■□□□□ 0.32
RAB40B-206ENST00000571995 DCLK2Q8N568 766 aa17.02■□□□□ 0.32
RAB40B-206ENST00000571995 C2orf40Q9H1Z8 148 aa17.02■□□□□ 0.32
RAB40B-206ENST00000571995 DPP3Q9NY33 737 aa17.02■□□□□ 0.32
RAB40B-206ENST00000571995 BTNL10A8MVZ5 291 aa17.02■□□□□ 0.31
RAB40B-206ENST00000571995 M0QZ92 97 aa17.02■□□□□ 0.31
RAB40B-206ENST00000571995 AVILO75366 819 aa17.02■□□□□ 0.31
RAB40B-206ENST00000571995 RFC5P40937 340 aa17.02■□□□□ 0.31
RAB40B-206ENST00000571995 EML3Q32P44 896 aa17.02■□□□□ 0.31
RAB40B-206ENST00000571995 RWDD4Q6NW29 188 aaKnown RBP17.02■□□□□ 0.31
RAB40B-206ENST00000571995 XRRA1Q6P2D8 792 aa17.02■□□□□ 0.31
RAB40B-206ENST00000571995 SPOCD1Q6ZMY3 1216 aa17.02■□□□□ 0.31
RAB40B-206ENST00000571995 KCTD17Q8N5Z5 321 aa17.02■□□□□ 0.31
RAB40B-206ENST00000571995 RDM1Q8NG50 284 aa17.02■□□□□ 0.31
RAB40B-206ENST00000571995 PNMA3Q9UL41 463 aa17.02■□□□□ 0.31
RAB40B-206ENST00000571995 MT-ND3P03897 115 aa17.01■□□□□ 0.31
RAB40B-206ENST00000571995 AP1B1Q10567 949 aa17.01■□□□□ 0.31
RAB40B-206ENST00000571995 AUHQ13825 339 aaKnown RBP17.01■□□□□ 0.31
RAB40B-206ENST00000571995 EFTUD2Q15029 972 aaKnown RBP eCLIP17.01■□□□□ 0.31
RAB40B-206ENST00000571995 TAF1CQ15572 869 aaPredicted RBP17.01■□□□□ 0.31
RAB40B-206ENST00000571995 PPP1R36Q96LQ0 422 aa17.01■□□□□ 0.31
RAB40B-206ENST00000571995 CDT1Q9H211 546 aa17.01■□□□□ 0.31
RAB40B-206ENST00000571995 TMEM59LQ9UK28 342 aa17.01■□□□□ 0.31
RAB40B-206ENST00000571995 RPTORQ8N122 1335 aa17.01■□□□□ 0.31
RAB40B-206ENST00000571995 NRAPQ86VF7 1730 aa17.01■□□□□ 0.31
RAB40B-206ENST00000571995 I3L4J1 428 aa17.01■□□□□ 0.31
RAB40B-206ENST00000571995 PLA2G6O60733 806 aa17.01■□□□□ 0.31
RAB40B-206ENST00000571995 SLC1A1P43005 524 aa17.01■□□□□ 0.31
RAB40B-206ENST00000571995 DCAF6Q58WW2 860 aa17.01■□□□□ 0.31
RAB40B-206ENST00000571995 TRIM68Q6AZZ1 485 aa17.01■□□□□ 0.31
RAB40B-206ENST00000571995 DSTYKQ6XUX3 929 aa17.01■□□□□ 0.31
RAB40B-206ENST00000571995 MAP7D3Q8IWC1 876 aa17.01■□□□□ 0.31
RAB40B-206ENST00000571995 XPO7Q9UIA9 1087 aaKnown RBP17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms