RNA–Protein interactions for RNA: ENST00000571886.1

GTF3C1-213, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-213ENST00000571886 CFHP08603 1231 aa10.96□□□□□ -0.65
GTF3C1-213ENST00000571886 FCARP24071 287 aa10.96□□□□□ -0.65
GTF3C1-213ENST00000571886 PSMC2P35998 433 aaKnown RBP10.96□□□□□ -0.65
GTF3C1-213ENST00000571886 GNL1P36915 607 aaPredicted RBP10.96□□□□□ -0.65
GTF3C1-213ENST00000571886 GCLMP48507 274 aa10.96□□□□□ -0.65
GTF3C1-213ENST00000571886 LHX1P48742 406 aa10.96□□□□□ -0.65
GTF3C1-213ENST00000571886 EPHB3P54753 998 aa10.96□□□□□ -0.65
GTF3C1-213ENST00000571886 VCPP55072 806 aaKnown RBP10.96□□□□□ -0.65
GTF3C1-213ENST00000571886 MCCD1P59942 119 aaPredicted RBP10.96□□□□□ -0.65
GTF3C1-213ENST00000571886 GPC5P78333 572 aa10.96□□□□□ -0.65
GTF3C1-213ENST00000571886 MYL7Q01449 175 aa10.96□□□□□ -0.65
GTF3C1-213ENST00000571886 TSPY1Q01534 308 aa10.96□□□□□ -0.65
GTF3C1-213ENST00000571886 MORC3Q14149 939 aa10.96□□□□□ -0.65
GTF3C1-213ENST00000571886 CAMK4Q16566 473 aa10.96□□□□□ -0.65
GTF3C1-213ENST00000571886 DDR2Q16832 855 aa10.96□□□□□ -0.65
GTF3C1-213ENST00000571886 EDRF1Q3B7T1 1238 aa10.96□□□□□ -0.65
GTF3C1-213ENST00000571886 CYP4A22Q5TCH4 519 aa10.96□□□□□ -0.65
GTF3C1-213ENST00000571886 IQCEQ6IPM2 695 aa10.96□□□□□ -0.65
GTF3C1-213ENST00000571886 ZC3H3Q8IXZ2 948 aaKnown RBP10.96□□□□□ -0.65
GTF3C1-213ENST00000571886 UBALD2Q8IYN6 164 aa10.96□□□□□ -0.65
GTF3C1-213ENST00000571886 ELMOD1Q8N336 334 aa10.96□□□□□ -0.65
GTF3C1-213ENST00000571886 OR6B3Q8NGW1 331 aa10.96□□□□□ -0.65
GTF3C1-213ENST00000571886 SPPL2BQ8TCT7 592 aa10.96□□□□□ -0.65
GTF3C1-213ENST00000571886 PSMG2Q969U7 264 aa10.96□□□□□ -0.65
GTF3C1-213ENST00000571886 CCDC34Q96HJ3 373 aa10.96□□□□□ -0.65
GTF3C1-213ENST00000571886 SYT15Q9BQS2 421 aa10.96□□□□□ -0.65
GTF3C1-213ENST00000571886 MKNK1Q9BUB5 465 aa10.96□□□□□ -0.65
GTF3C1-213ENST00000571886 MMRN2Q9H8L6 949 aa10.96□□□□□ -0.65
GTF3C1-213ENST00000571886 IL21Q9HBE4 155 aa10.96□□□□□ -0.65
GTF3C1-213ENST00000571886 APOBEC3GQ9HC16 384 aaKnown RBP10.96□□□□□ -0.65
GTF3C1-213ENST00000571886 ASAH2Q9NR71 780 aa10.96□□□□□ -0.65
GTF3C1-213ENST00000571886 HSFX1Q9UBD0 423 aa10.96□□□□□ -0.65
GTF3C1-213ENST00000571886 PCDHB5Q9Y5E4 795 aa10.96□□□□□ -0.65
GTF3C1-213ENST00000571886 ZFP37Q9Y6Q3 630 aaPredicted RBP10.96□□□□□ -0.65
GTF3C1-213ENST00000571886 OBSL1O75147 1896 aa10.95□□□□□ -0.66
GTF3C1-213ENST00000571886 KRBA1A5PL33 1030 aa10.95□□□□□ -0.66
GTF3C1-213ENST00000571886 ZNF197O14709 1029 aa10.95□□□□□ -0.66
GTF3C1-213ENST00000571886 IKBKBO14920 756 aa10.95□□□□□ -0.66
GTF3C1-213ENST00000571886 TACC1O75410 805 aa10.95□□□□□ -0.66
GTF3C1-213ENST00000571886 HMGA1P17096 107 aaKnown RBP10.95□□□□□ -0.66
GTF3C1-213ENST00000571886 NPR3P17342 541 aa10.95□□□□□ -0.66
GTF3C1-213ENST00000571886 RPL13P26373 211 aaKnown RBP10.95□□□□□ -0.66
GTF3C1-213ENST00000571886 ATICP31939 592 aa10.95□□□□□ -0.66
GTF3C1-213ENST00000571886 TUFMP49411 452 aaKnown RBP10.95□□□□□ -0.66
GTF3C1-213ENST00000571886 AP3M2P53677 418 aa10.95□□□□□ -0.66
GTF3C1-213ENST00000571886 UBE2HP62256 183 aa10.95□□□□□ -0.66
GTF3C1-213ENST00000571886 TNNC1P63316 161 aa10.95□□□□□ -0.66
GTF3C1-213ENST00000571886 FAM78AQ5JUQ0 283 aa10.95□□□□□ -0.66
GTF3C1-213ENST00000571886 SCARA5Q6ZMJ2 495 aa10.95□□□□□ -0.66
GTF3C1-213ENST00000571886 TMEM150AQ86TG1 271 aa10.95□□□□□ -0.66
GTF3C1-213ENST00000571886 SPATA18Q8TC71 538 aa10.95□□□□□ -0.66
GTF3C1-213ENST00000571886 FAM200AQ8TCP9 573 aa10.95□□□□□ -0.66
GTF3C1-213ENST00000571886 TAS1R2Q8TE23 839 aa10.95□□□□□ -0.66
GTF3C1-213ENST00000571886 C2orf15Q8WU43 125 aaKnown RBP10.95□□□□□ -0.66
GTF3C1-213ENST00000571886 SEMA4DQ92854 862 aa10.95□□□□□ -0.66
GTF3C1-213ENST00000571886 NXPE3Q969Y0 559 aa10.95□□□□□ -0.66
GTF3C1-213ENST00000571886 MYLPFQ96A32 169 aa10.95□□□□□ -0.66
GTF3C1-213ENST00000571886 SYAP1Q96A49 352 aaPredicted RBP10.95□□□□□ -0.66
GTF3C1-213ENST00000571886 DUSP9Q99956 384 aaKnown RBP10.95□□□□□ -0.66
GTF3C1-213ENST00000571886 VRTNQ9H8Y1 702 aa10.95□□□□□ -0.66
GTF3C1-213ENST00000571886 TMEM30AQ9NV96 361 aa10.95□□□□□ -0.66
GTF3C1-213ENST00000571886 CDH9Q9ULB4 789 aa10.95□□□□□ -0.66
GTF3C1-213ENST00000571886 KMT2EQ8IZD2 1858 aa10.95□□□□□ -0.66
GTF3C1-213ENST00000571886 ANAPC1Q9H1A4 1944 aa10.94□□□□□ -0.66
GTF3C1-213ENST00000571886 CLDN5O00501 218 aa10.94□□□□□ -0.66
GTF3C1-213ENST00000571886 CETN3O15182 167 aa10.94□□□□□ -0.66
GTF3C1-213ENST00000571886 PI15O43692 258 aa10.94□□□□□ -0.66
GTF3C1-213ENST00000571886 MICAL2O94851 1124 aa10.94□□□□□ -0.66
GTF3C1-213ENST00000571886 FAM163BP0C2L3 166 aa10.94□□□□□ -0.66
GTF3C1-213ENST00000571886 SRFP11831 508 aa10.94□□□□□ -0.66
GTF3C1-213ENST00000571886 PTPN1P18031 435 aaKnown RBP10.94□□□□□ -0.66
GTF3C1-213ENST00000571886 BDNFP23560 247 aa10.94□□□□□ -0.66
GTF3C1-213ENST00000571886 CCNE1P24864 410 aa10.94□□□□□ -0.66
GTF3C1-213ENST00000571886 GABRR2P28476 465 aa10.94□□□□□ -0.66
GTF3C1-213ENST00000571886 PCSK1P29120 753 aa10.94□□□□□ -0.66
GTF3C1-213ENST00000571886 VIPR2P41587 438 aa10.94□□□□□ -0.66
GTF3C1-213ENST00000571886 CACNA2D1P54289 1103 aa10.94□□□□□ -0.66
GTF3C1-213ENST00000571886 CYP4F8P98187 520 aa10.94□□□□□ -0.66
GTF3C1-213ENST00000571886 SMARCB1Q12824 385 aa10.94□□□□□ -0.66
GTF3C1-213ENST00000571886 PLD1Q13393 1074 aa10.94□□□□□ -0.66
GTF3C1-213ENST00000571886 ORC1Q13415 861 aa10.94□□□□□ -0.66
GTF3C1-213ENST00000571886 NFE2Q16621 373 aaPredicted RBP10.94□□□□□ -0.66
GTF3C1-213ENST00000571886 ZNF699Q32M78 642 aa10.94□□□□□ -0.66
GTF3C1-213ENST00000571886 ZNF667Q5HYK9 610 aa10.94□□□□□ -0.66
GTF3C1-213ENST00000571886 MDH1BQ5I0G3 518 aa10.94□□□□□ -0.66
GTF3C1-213ENST00000571886 KLHL10Q6JEL2 608 aa10.94□□□□□ -0.66
GTF3C1-213ENST00000571886 INTS8Q75QN2 995 aaKnown RBP10.94□□□□□ -0.66
GTF3C1-213ENST00000571886 SPATA2LQ8IUW3 424 aaPredicted RBP10.94□□□□□ -0.66
GTF3C1-213ENST00000571886 RSPRY1Q96DX4 576 aa10.94□□□□□ -0.66
GTF3C1-213ENST00000571886 PCED1BQ96HM7 432 aa10.94□□□□□ -0.66
GTF3C1-213ENST00000571886 ASB16Q96NS5 453 aa10.94□□□□□ -0.66
GTF3C1-213ENST00000571886 LRRC3BQ96PB8 259 aa10.94□□□□□ -0.66
GTF3C1-213ENST00000571886 B3GNT5Q9BYG0 378 aa10.94□□□□□ -0.66
GTF3C1-213ENST00000571886 SNX25Q9H3E2 840 aa10.94□□□□□ -0.66
GTF3C1-213ENST00000571886 ATXN3LQ9H3M9 355 aa10.94□□□□□ -0.66
GTF3C1-213ENST00000571886 GDE1Q9NZC3 331 aa10.94□□□□□ -0.66
GTF3C1-213ENST00000571886 HMGXB4Q9UGU5 601 aa10.94□□□□□ -0.66
GTF3C1-213ENST00000571886 HOOK1Q9UJC3 728 aaKnown RBP10.94□□□□□ -0.66
GTF3C1-213ENST00000571886 CA14Q9ULX7 337 aa10.94□□□□□ -0.66
GTF3C1-213ENST00000571886 ASB3Q9Y575 518 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms