RNA–Protein interactions for RNA: ENST00000571806.1

TSR1-202, Transcript of TSR1, ribosome maturation factor, humanhuman

TSL 2

Gene TSR1, Length 794 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-202ENST00000571806 TTC8Q8TAM2 541 aa16.73■□□□□ 0.27
TSR1-202ENST00000571806 LOXL4Q96JB6 756 aa16.73■□□□□ 0.27
TSR1-202ENST00000571806 SEMA4GQ9NTN9 838 aa16.73■□□□□ 0.27
TSR1-202ENST00000571806 ITGA11Q9UKX5 1188 aa16.73■□□□□ 0.27
TSR1-202ENST00000571806 CEP250Q9BV73 2442 aa16.72■□□□□ 0.27
TSR1-202ENST00000571806 GPR179Q6PRD1 2367 aa16.72■□□□□ 0.27
TSR1-202ENST00000571806 TRDMT1O14717 391 aaKnown RBP16.72■□□□□ 0.27
TSR1-202ENST00000571806 SLC30A4O14863 429 aa16.72■□□□□ 0.27
TSR1-202ENST00000571806 KIAA0391O15091 583 aaKnown RBP16.72■□□□□ 0.27
TSR1-202ENST00000571806 PRPF40AO75400 957 aaKnown RBP16.72■□□□□ 0.27
TSR1-202ENST00000571806 HMGA1P17096 107 aaKnown RBP16.72■□□□□ 0.27
TSR1-202ENST00000571806 LHX1P48742 406 aa16.72■□□□□ 0.27
TSR1-202ENST00000571806 TFAMQ00059 246 aaKnown RBP16.72■□□□□ 0.27
TSR1-202ENST00000571806 TNK2Q07912 1038 aa16.72■□□□□ 0.27
TSR1-202ENST00000571806 PDGFRLQ15198 375 aa16.72■□□□□ 0.27
TSR1-202ENST00000571806 TMEM196Q5HYL7 178 aa16.72■□□□□ 0.27
TSR1-202ENST00000571806 WDR44Q5JSH3 913 aa16.72■□□□□ 0.27
TSR1-202ENST00000571806 CCDC73Q6ZRK6 1079 aa16.72■□□□□ 0.27
TSR1-202ENST00000571806 CEP68Q76N32 757 aa16.72■□□□□ 0.27
TSR1-202ENST00000571806 MON1AQ86VX9 555 aa16.72■□□□□ 0.27
TSR1-202ENST00000571806 BRSK2Q8IWQ3 736 aa16.72■□□□□ 0.27
TSR1-202ENST00000571806 SYCP3Q8IZU3 236 aa16.72■□□□□ 0.27
TSR1-202ENST00000571806 DDX1Q92499 740 aaKnown RBP16.72■□□□□ 0.27
TSR1-202ENST00000571806 TRMT2BQ96GJ1 504 aaKnown RBP16.72■□□□□ 0.27
TSR1-202ENST00000571806 FAM213AQ9BRX8 229 aa16.72■□□□□ 0.27
TSR1-202ENST00000571806 TMEM206Q9H813 350 aa16.72■□□□□ 0.27
TSR1-202ENST00000571806 GDAP2Q9NXN4 497 aa16.72■□□□□ 0.27
TSR1-202ENST00000571806 AGAP1Q9UPQ3 857 aa16.72■□□□□ 0.27
TSR1-202ENST00000571806 R3HCC1Q9Y3T6 440 aaKnown RBP16.72■□□□□ 0.27
TSR1-202ENST00000571806 MORC2Q9Y6X9 1032 aaPredicted RBP16.72■□□□□ 0.27
TSR1-202ENST00000571806 VPS37CA5D8V6 355 aaPredicted RBP16.71■□□□□ 0.27
TSR1-202ENST00000571806 GCNT3O95395 438 aa16.71■□□□□ 0.27
TSR1-202ENST00000571806 ITGB3P05106 788 aa16.71■□□□□ 0.27
TSR1-202ENST00000571806 POLR2BP30876 1174 aaKnown RBP16.71■□□□□ 0.27
TSR1-202ENST00000571806 FBXO43Q4G163 708 aa16.71■□□□□ 0.27
TSR1-202ENST00000571806 PRR23CQ6ZRP0 262 aa16.71■□□□□ 0.27
TSR1-202ENST00000571806 DPH6Q7L8W6 267 aa16.71■□□□□ 0.27
TSR1-202ENST00000571806 TMEM150AQ86TG1 271 aa16.71■□□□□ 0.27
TSR1-202ENST00000571806 PDCL2Q8N4E4 241 aa16.71■□□□□ 0.27
TSR1-202ENST00000571806 CAMKK1Q8N5S9 505 aa16.71■□□□□ 0.27
TSR1-202ENST00000571806 FSIP1Q8NA03 581 aa16.71■□□□□ 0.27
TSR1-202ENST00000571806 USP13Q92995 863 aaPredicted RBP16.71■□□□□ 0.27
TSR1-202ENST00000571806 DNAJC19Q96DA6 116 aa16.71■□□□□ 0.27
TSR1-202ENST00000571806 FUBP3Q96I24 572 aaKnown RBP eCLIP16.71■□□□□ 0.27
TSR1-202ENST00000571806 MYRFLQ96LU7 910 aa16.71■□□□□ 0.27
TSR1-202ENST00000571806 PI4K2AQ9BTU6 479 aa16.71■□□□□ 0.27
TSR1-202ENST00000571806 DDX43Q9NXZ2 648 aaKnown RBP16.71■□□□□ 0.27
TSR1-202ENST00000571806 RBAKQ9NYW8 714 aaPredicted RBP16.71■□□□□ 0.27
TSR1-202ENST00000571806 FBXO2Q9UK22 296 aaPredicted RBP16.71■□□□□ 0.27
TSR1-202ENST00000571806 SLC8A2Q9UPR5 921 aa16.71■□□□□ 0.27
TSR1-202ENST00000571806 CLIC4Q9Y696 253 aa16.71■□□□□ 0.27
TSR1-202ENST00000571806 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.71■□□□□ 0.27
TSR1-202ENST00000571806 DENND4CQ5VZ89 1909 aa16.7■□□□□ 0.26
TSR1-202ENST00000571806 KIF26AQ9ULI4 1882 aaPredicted RBP16.7■□□□□ 0.26
TSR1-202ENST00000571806 MYMKA6NI61 221 aa16.7■□□□□ 0.26
TSR1-202ENST00000571806 EXTL3O43909 919 aa16.7■□□□□ 0.26
TSR1-202ENST00000571806 AKAP3O75969 853 aa16.7■□□□□ 0.26
TSR1-202ENST00000571806 DRD1P21728 446 aa16.7■□□□□ 0.26
TSR1-202ENST00000571806 PCSK1P29120 753 aa16.7■□□□□ 0.26
TSR1-202ENST00000571806 RBP5P82980 135 aa16.7■□□□□ 0.26
TSR1-202ENST00000571806 DMWDQ09019 674 aa16.7■□□□□ 0.26
TSR1-202ENST00000571806 MYO1EQ12965 1108 aa16.7■□□□□ 0.26
TSR1-202ENST00000571806 CUL4AQ13619 759 aa16.7■□□□□ 0.26
TSR1-202ENST00000571806 CFAP221Q4G0U5 840 aa16.7■□□□□ 0.26
TSR1-202ENST00000571806 INTS6LQ5JSJ4 861 aaKnown RBP16.7■□□□□ 0.26
TSR1-202ENST00000571806 HEATR6Q6AI08 1181 aaKnown RBP16.7■□□□□ 0.26
TSR1-202ENST00000571806 STXBP4Q6ZWJ1 553 aa16.7■□□□□ 0.26
TSR1-202ENST00000571806 FAM160A2Q8N612 972 aaPredicted RBP16.7■□□□□ 0.26
TSR1-202ENST00000571806 CSGALNACT2Q8N6G5 542 aa16.7■□□□□ 0.26
TSR1-202ENST00000571806 TOP6BLQ8N6T0 577 aa16.7■□□□□ 0.26
TSR1-202ENST00000571806 C1orf127Q8N9H9 656 aa16.7■□□□□ 0.26
TSR1-202ENST00000571806 CCDC26Q8TAB7 109 aa16.7■□□□□ 0.26
TSR1-202ENST00000571806 CEP295NLQ96MC4 621 aa16.7■□□□□ 0.26
TSR1-202ENST00000571806 SMG9Q9H0W8 520 aaKnown RBP16.7■□□□□ 0.26
TSR1-202ENST00000571806 MAGED2Q9UNF1 606 aaPredicted RBP16.7■□□□□ 0.26
TSR1-202ENST00000571806 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.69■□□□□ 0.26
TSR1-202ENST00000571806 FRMD3A2A2Y4 597 aa16.69■□□□□ 0.26
TSR1-202ENST00000571806 DCDC2BA2VCK2 349 aa16.69■□□□□ 0.26
TSR1-202ENST00000571806 NOL4O94818 638 aa16.69■□□□□ 0.26
TSR1-202ENST00000571806 CENPBP07199 599 aaPredicted RBP16.69■□□□□ 0.26
TSR1-202ENST00000571806 USP17L7P0C7H9 530 aa16.69■□□□□ 0.26
TSR1-202ENST00000571806 PDE6CP51160 858 aa16.69■□□□□ 0.26
TSR1-202ENST00000571806 FAM160A1Q05DH4 1040 aa16.69■□□□□ 0.26
TSR1-202ENST00000571806 KCNA1Q09470 495 aa16.69■□□□□ 0.26
TSR1-202ENST00000571806 SURF1Q15526 300 aa16.69■□□□□ 0.26
TSR1-202ENST00000571806 TXNDC8Q6A555 127 aa16.69■□□□□ 0.26
TSR1-202ENST00000571806 USP49Q70CQ1 688 aa16.69■□□□□ 0.26
TSR1-202ENST00000571806 CACNA2D4Q7Z3S7 1137 aa16.69■□□□□ 0.26
TSR1-202ENST00000571806 CPA6Q8N4T0 437 aa16.69■□□□□ 0.26
TSR1-202ENST00000571806 GAB3Q8WWW8 586 aa16.69■□□□□ 0.26
TSR1-202ENST00000571806 LRRC27Q9C0I9 530 aa16.69■□□□□ 0.26
TSR1-202ENST00000571806 EBF3Q9H4W6 596 aa16.69■□□□□ 0.26
TSR1-202ENST00000571806 HPS4Q9NQG7 708 aa16.69■□□□□ 0.26
TSR1-202ENST00000571806 TMLHEQ9NVH6 421 aa16.69■□□□□ 0.26
TSR1-202ENST00000571806 L1RE1Q9UN81 338 aa16.69■□□□□ 0.26
TSR1-202ENST00000571806 CCL26Q9Y258 94 aa16.69■□□□□ 0.26
TSR1-202ENST00000571806 GABRDO14764 452 aa16.68■□□□□ 0.26
TSR1-202ENST00000571806 RPP40O75818 363 aaKnown RBP16.68■□□□□ 0.26
TSR1-202ENST00000571806 KRT19P08727 400 aa16.68■□□□□ 0.26
TSR1-202ENST00000571806 TMEM191BP0C7N4 346 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms